Molecular diversity of the coat protein-encoding region of Barley yellow dwarf virus-PAV and Barley yellow dwarf virus-MAV from Latvia and Sweden.

Abstract:

:The sequence variability of Barley yellow dwarf virus-PAV (PAV) and Barley yellow dwarf virus-MAV (MAV) was studied by comparing 502 nucleotides from the coat protein-encoding region of six isolates from Latvia and four from Sweden. The diversity within MAV was low (>97% sequence identity), also when compared to isolates from USA and China. In contrast, the variability among PAV isolates was greater and phylogenetic analysis including isolates of a wide geographic origin detected two major clusters, of which both contained isolates from Latvia and Sweden. A new distinct variant of BYDV-PAV was discovered in Latvia, and because of the sequence difference it is proposed to belong to a new species (BYDV-OYV).

journal_name

Arch Virol

journal_title

Archives of virology

authors

Bisnieks M,Kvarnheden A,Sigvald R,Valkonen JP

doi

10.1007/s00705-003-0242-2

keywords:

subject

Has Abstract

pub_date

2004-04-01 00:00:00

pages

843-53

issue

4

eissn

0304-8608

issn

1432-8798

journal_volume

149

pub_type

杂志文章
  • Nucleotide sequence of a chickpea chlorotic stunt virus relative that infects pea and faba bean in China.

    abstract::We determined the genome sequence of a new polerovirus that infects field pea and faba bean in China. Its entire nucleotide sequence (6021 nt) was most closely related (83.3% identity) to that of an Ethiopian isolate of chickpea chlorotic stunt virus (CpCSV-Eth). With the exception of the coat protein (encoded by ORF3...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-012-1301-3

    authors: Zhou CJ,Xiang HY,Zhuo T,Li DW,Yu JL,Han CG

    更新日期:2012-07-01 00:00:00

  • Molecular characterization of a novel reovirus isolated from Pekin ducklings in China.

    abstract::The complete genome sequence of a novel duck orthoreovirus, designated DRV strain TH11(DRV-TH11), was determined and characterized. The DRV-TH11 genome is comprised of 23,417 bp and its genome organization is more similar to that of avian orthoreoviruses (ARVs) of chicken origin than other reoviruses. The results of c...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-014-2241-x

    authors: Zhu YQ,Li CF,Bi ZL,Chen ZY,Meng CC,Wang GJ,Ding C,Liu GQ

    更新日期:2015-01-01 00:00:00

  • Regulation of the microRNA processor DGCR8 by hepatitis B virus proteins via the transcription factor YY1.

    abstract::MicroRNAs (miRNAs) are a new class of well-conserved small noncoding RNAs that mediate posttranscriptional gene regulation. Hepatitis B virus (HBV) causes various liver diseases, including chronic hepatitis, liver cirrhosis and hepatocellular cancer. Recent data have indicated HBV alters miRNAs expression patterns, bu...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-014-2286-x

    authors: Shan X,Ren M,Chen K,Huang A,Tang H

    更新日期:2015-03-01 00:00:00

  • Molecular detection and characterization of genotype 1 bovine leukemia virus from beef cattle in the traditional sector in Zambia.

    abstract::Whilst bovine leukemia virus (BLV) causes considerable economic losses to the dairy industry worldwide, information on its molecular epidemiology and economic impact in beef cattle is limited. Here, blood from 880 animals from Zambia's major cattle-rearing provinces was screened for BLV by nested PCR. Positive pools w...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-019-04350-6

    authors: Phiri MM,Kaimoyo E,Changula K,Silwamba I,Chambaro HM,Kapila P,Kajihara M,Simuunza M,Muma JB,Pandey GS,Takada A,Mweene AS,Chitanga S,Simulundu E

    更新日期:2019-10-01 00:00:00

  • The porcine paramyxovirus LPM specifically recognizes sialyl (alpha 2,3) lactose-containing structures.

    abstract::The porcine paramyxovirus LPM recognizes alpha, but not beta, anomers of sialic acid containing structures, specifically sialyl (alpha 2,3) lactose. The virus specificity is directed to the sialyl residue and to the C'4 axial OH and the C'6 CH2OH of the galactose present in this structure. ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01309755

    authors: Reyes-Leyva J,Hernández-Jáuregui P,Montaño LF,Zenteno E

    更新日期:1993-01-01 00:00:00

  • Proteomic analysis of monkey kidney LLC-MK2 cells infected with a Thai strain Zika virus.

    abstract::Zika virus (ZIKV) has been endemic in Southeast Asian countries for several years, but the presence of the virus has not been associated with significant outbreaks of infection unlike other countries around the world where the Asian lineage ZIKV was introduced recently. However, few studies have been undertaken using ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-018-04137-1

    authors: Diteepeng T,Khongwichit S,Paemanee A,Roytrakul S,Smith DR

    更新日期:2019-03-01 00:00:00

  • Bovine herpesvirus type 1 gp87 mediates both attachment of virions to susceptible cells and hemagglutination.

    abstract::The 87,000-dalton glycoprotein (gp87) of bovine herpesvirus type 1 (BHV-1) was found to selectively attach to susceptible cells. The attachment of gp87 to the cells was markedly decreased by the prior adsorption of intact virions. Anti-gp87 (site Ia) monoclonal antibody, which inhibited BHV-1 adsorption to the cells a...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01314428

    authors: Okazaki K,Honda E,Minetoma T,Kumagai T

    更新日期:1987-01-01 00:00:00

  • Genetic analysis of four porcine avian influenza viruses isolated from Shandong, China.

    abstract::A Bayesian phylogenetic analysis of eight separate gene segments indicated A/Swine/Shandong/2/2003 (H5N1), A/Swine/Shandong/na/2003 (H9N2), A/Swine/Shandong/nb/2003 (H9N2) and A/Swine/Shandong/nc/2005 (H9N2) probably represent two multiple reassortant lineages, that had not been described before, with genes coming fro...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-007-1083-1

    authors: Shi WF,Gibbs MJ,Zhang YZ,Zhang Z,Zhao XM,Jin X,Zhu CD,Yang MF,Yang NN,Cui YJ,Ji L

    更新日期:2008-01-01 00:00:00

  • Pathogenic properties of encephalomyocarditis virus isolates in swine fetuses.

    abstract::The pathogenicity of 5 different encephalomyocarditis (EMC) virus isolates was investigated in swine fetuses following injection of each virus in utero. Laparotomies were performed on 3 pregnant sows in early mid-third (39-40 days) of gestation and on 5 sows in the late mid-third (70-72 days) of gestation, and groups ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01310517

    authors: Kim HS,Christianson WT,Joo HS

    更新日期:1989-01-01 00:00:00

  • Sequence analysis of the glycoprotein E gene of varicella-zoster virus strains of clades 1, 3 and 5.

    abstract::Eighty-six varicella-zoster virus (VZV) strains of clades 1, 3 and 5, isolated from varicella and zoster patients in Germany, were analyzed by sequencing the glycoprotein E gene. Four novel non-synonymous and 10 novel synonymous mutations were detected. Of these, two synonymous (C513T, C885T) and two non-synonymous mu...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-010-0864-0

    authors: Sauerbrei A,Wiesener N,Zell R,Wutzler P

    更新日期:2011-03-01 00:00:00

  • Lack of quantitative correlation between inhibition of replication of rhinoviruses by an antiviral drug and their stabilization.

    abstract::R 61,837, a new antirhinovirus compound, was able to protect several susceptible rhinoviruses against inactivation by mild acidification or heat. This observation strengthens the hypothesis that the drug exerts antiviral activity by a direct interaction with the viral protein capsid to stabilize the particle. However,...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01311037

    authors: Andries K,Dewindt B,Snoeks J,Willebrords R

    更新日期:1989-01-01 00:00:00

  • A virus related to soybean mosaic virus from Pinellia ternata in China and its comparison with local soybean SMV isolates.

    abstract::A potyvirus isolated from Pinellia ternata in China was characterised and shown to be related to Soybean mosaic virus (SMV). The virus was pathogenic on P. ternata and some soybean cultivars, whereas the local soybean SMV isolate HH5 did not infect P. ternata. Western blot experiments demonstrated a serological relati...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-003-0184-8

    authors: Chen J,Zheng HY,Lin L,Adams MJ,Antoniw JF,Zhao MF,Shang YF,Chen JP

    更新日期:2004-02-01 00:00:00

  • Guinea pig cytomegalovirus: transplacental transmission. Brief report.

    abstract::A well characterized strain of guinea pig cytomegalovirus (GPCMV) was used to infect pregnant guinea pigs during various periods of pregnancy. Transplacental transmission of virus with invasion of the fetus was observed, even in some mothers with preinoculation evidence of GPCMV antibody. Fetal infection occurred duri...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01317422

    authors: Johnson KP,Connor WS

    更新日期:1979-01-01 00:00:00

  • Identification of phosphoprotein:phosphoprotein and phosphoprotein:nucleocapsid protein interaction domains of the Newcastle disease virus.

    abstract::The yeast two-hybrid system has been used to identify domains of the Newcastle disease virus (NDV) phosphoprotein (P) involved in self-association and interaction with the nucleocapsid protein (NP). Deletion analysis was used to map the domain(s) of the P protein involved in P:P and P:NP interactions. The C-terminal 4...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-004-0439-z

    authors: Jahanshiri F,Eshaghi M,Yusoff K

    更新日期:2005-03-01 00:00:00

  • Establishment of persistent foot-and-mouth disease virus (FMDV) infection in MDBK cells.

    abstract::In addition to acute infection and disease, foot-and-mouth disease virus (FMDV) can cause persistent infection in ruminants. Such "carrier" animals represent a potential risk for FMDV transmission to susceptible animals. However, the mechanisms and the factors that determine FMDV persistence remain unknown. We describ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-015-2526-8

    authors: Kopliku L,Relmy A,Romey A,Gorna K,Zientara S,Bakkali-Kassimi L,Blaise-Boisseau S

    更新日期:2015-10-01 00:00:00

  • Expression of human endogenous retrovirus K and W in babies.

    abstract::Here we determined the relative expression of HERV-K and W proviruses in HIV infected and non-infected mothers as well as their respective babies up to 1 year-old. HIV-infected mothers, their babies and uninfected control groups presented expression of both HERV-K and HERV-W with relatively high frequency. While the l...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-016-3167-2

    authors: Nali LH,Oliveira AC,Alves DO,Caleiro GS,Nunes CF,Gerhardt D,Succi RC,Romano CM,Machado DM

    更新日期:2017-03-01 00:00:00

  • Analysis of bovine herpes virus-type 1 isolates by restriction endonuclease fingerprinting.

    abstract::In an effort to determine whether distinct types of bovine herpesvirus 1 are responsible for causing specific syndromes, the polypeptides and DNA of 93 BHV 1 isolates from the province of Alberta as well as vaccine strains and numerous other Canadian, U.S. and European isolates were analyzed by PAGE and restriction en...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01311201

    authors: Misra V,Babiuk LA,Darcel CL

    更新日期:1983-01-01 00:00:00

  • Differences in transmissibility and pathogenicity of reassortants between H9N2 and 2009 pandemic H1N1 influenza A viruses from humans and swine.

    abstract::Both H9N2 subtype avian influenza and 2009 pandemic H1N1 viruses (pH1N1) can infect humans and pigs, which provides the opportunity for virus reassortment, leading to the genesis of new strains with potential pandemic risk. In this study, we generated six reassortant H9 viruses in the background of three pH1N1 strains...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-014-2009-3

    authors: He L,Wu Q,Jiang K,Duan Z,Liu J,Xu H,Cui Z,Gu M,Wang X,Liu X,Liu X

    更新日期:2014-07-01 00:00:00

  • Molecular characterization of canine parvovirus in Vientiane, Laos.

    abstract::The global emergence of canine parvovirus type 2c (CPV-2c) has been well documented. In the present study, 139 rectal swab samples collected from diarrheic dogs living in Vientiane, Laos, in 2016 were tested for the presence of the canine parvovirus (CPV) VP2 gene by PCR. The results showed that 82.73% (115/139) of do...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-016-3212-1

    authors: Vannamahaxay S,Vongkhamchanh S,Intanon M,Tangtrongsup S,Tiwananthagorn S,Pringproa K,Chuammitri P

    更新日期:2017-05-01 00:00:00

  • Antiretroviral drug resistance mutations in the reverse transcriptase gene of HIV-1 isolates from Northern Indian patients: a follow-up study.

    abstract::The viral reverse transcriptase gene was amplified from the plasma of 27 drug-naïve and five drug-experienced HIV patients in Northern India. Follow-up samples of naïve patients after antiretroviral therapy initiation were collected in six patients at 3 months and three patients at 6 months. Phylogenetic analysis reve...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-010-0605-4

    authors: Dutta Choudhury S,Chaudhury AK,Kalra R,Andrabi R,Wig N,Biswas A,Bala M,Luthra K

    更新日期:2010-04-01 00:00:00

  • Strawberry necrotic shock virus is a distinct virus and not a strain of Tobacco streak virus.

    abstract::Fragaria (strawberry) and Rubus species (blackberry, wild blackberry, red raspberry and black raspberry) were thought to be infected with distinct isolates of Tobacco streak virus (TSV). Employing serology and nucleic acid hybridization it has been shown that these isolates form a cluster distinct from other strains o...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-004-0330-y

    authors: Tzanetakis IE,Mackey IC,Martin RR

    更新日期:2004-10-01 00:00:00

  • High frequency of BF mosaic genomes among HIV-1-infected children from Sao Paulo, Brazil.

    abstract::HIV-1 genetic diversity information from a pediatric population is scarce. This study enrolled 128 children living with HIV/AIDS, 103 antiretroviral-treated and 25 naive, from the Sao Paulo metropolitan area. Gag, pol and env regions were amplified, and drug resistance mutations, V3 loop, tropism and viral clades were...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-008-0178-7

    authors: de Oliveira CM,Almeida FJ,Rodrigues R,Crozatti M,Vazquez CM,do Socorro Carneiro Ferrão M,Campeas AE,Marques SR,Berezin EN,de Macedo Brígido LF

    更新日期:2008-01-01 00:00:00

  • CRISPR/Cas9-mediated multiple single guide RNAs potently abrogate pseudorabies virus replication.

    abstract::Pseudorabies virus (PRV) is a swine herpesvirus that causes significant morbidity and mortality in swine populations and has caused huge economic losses in the worldwide swine industry. Currently, there is no effective antiviral drug in clinical use for PRV infection; it is also difficult to eliminate PRV from infecte...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-017-3553-4

    authors: Tang YD,Liu JT,Wang TY,Sun MX,Tian ZJ,Cai XH

    更新日期:2017-12-01 00:00:00

  • Genetic structure and molecular variability of potato virus M populations.

    abstract::To investigate the genetic diversity of potato virus M (PVM; genus Carlavirus, family Betaflexiviridae), the complete nucleotide sequence of the coat protein gene of 30 PVM isolates from a major potato-growing region in Iran were determined. Phylogenetic analysis of these Iranian PVM isolates together with those avail...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-014-2037-z

    authors: Tabasinejad F,Jafarpour B,Zakiaghl M,Siampour M,Rouhani H,Mehrvar M

    更新日期:2014-08-01 00:00:00

  • Genetic properties of endemic Chinese porcine epidemic diarrhea virus strains isolated since 2010.

    abstract::Acute diarrhea outbreaks caused by porcine epidemic diarrhea virus (PEDV) have been observed in various pig-breeding provinces of China since December 2010. Endemic strains of PEDV were isolated from different areas, and the complete genome sequences of 10 isolates were determined. Our objective in this study was to g...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-013-1767-7

    authors: Wang XM,Niu BB,Yan H,Gao DS,Yang X,Chen L,Chang HT,Zhao J,Wang CQ

    更新日期:2013-12-01 00:00:00

  • Inability of translation of mRNA for HVJ (Sendai virus) M protein in a rat glioma cell line at nonpermissive temperatures.

    abstract::The synthesis of M protein of HVJ (Sendai virus) in rat glioma (C6) cells, as has previously been reported, is selectively reduced at a nonpermissive temperature of 39 degrees C. In this phenomenon no difference was found in the viral RNA synthesis and the stability of the viral RNAs between the permissive and nonperm...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01310830

    authors: Ogura H,Sato H,Ogura T,Tanaka J,Kamiya S,Nakamura S,Hatano M

    更新日期:1988-01-01 00:00:00

  • Complete genome sequences of blueberry red ringspot virus (Caulimoviridae) isolates from the Czech Republic and Slovenia.

    abstract::Genomic DNA of blueberry red ringspot virus (genus Soymovirus, family Caulimoviridae) from highbush blueberry plants growing for years in the Czech Republic and Slovenia was sequenced. The circular dsDNA genomes consist of 8,303 and 8,299 nt, respectively, and contain eight open reading frames (ORFs) longer than 100 a...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-011-1077-x

    authors: Petrzik K,Přibylová J,Pleško IM,Špak J

    更新日期:2011-10-01 00:00:00

  • Association of a distinct strain of hollyhock yellow vein mosaic virus and Ludwigia leaf distortion betasatellite with yellow vein mosaic disease of hollyhock (Alcea rosea) in India.

    abstract::A distinct strain of hollyhock yellow vein mosaic virus (HoYVMV) and Ludwigia leaf distortion betasatellite (LuLDB) were associated with yellow vein mosaic of hollyhock. The viral DNA genome (JQ911766) and betasatellite (JQ408216) shared highest nucleotide sequence identity (89.2 %) with HoYVMV (the only available seq...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-014-2108-1

    authors: Srivastava A,Kumar S,Raj SK,Pande SS

    更新日期:2014-10-01 00:00:00

  • qPCR assay for the detection of pseudocowpox virus.

    abstract::Pseudocowpox is a zoonosis caused by pseudocowpox virus (PCPV), which mainly affects cows but can be an occupational disease of humans. The aim of the study was to validate a quantitative polymerase chain reaction (qPCR) assay for the detection of PCPV. The assay was able to detect up to 1000 copies of PCPV per µL in ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-020-04872-4

    authors: de Oliveira Lopes GA,Ferreira LR,de Souza Trindade G,Fonseca AA Jr,Dos Reis JKP

    更新日期:2021-01-01 00:00:00

  • Characterization of the humoral immune response of experimentally infected and vaccinated pigs to swine influenza viral proteins.

    abstract::The value of serologic tests for diagnosis of swine influenza virus (SIV) infection has been diminished by the emergence of new subtypes and by antigenic drift within subtype. The intensive use of vaccination also has complicated interpretation of serology results. Serologic assays are needed that can detect infection...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-005-0615-9

    authors: Kim WI,Wu WH,Janke B,Yoon KJ

    更新日期:2006-01-01 00:00:00