Effects of 'hydrophobic mismatch' on the location of transmembrane helices in the ER membrane.

Abstract:

:We have studied the effects of 'hydrophobic mismatch' between a poly-Leu transmembrane helix (TMH) and the ER membrane using a glycosylation mapping approach. The simplest interpretation of our results is that the lumenal end of the TMH is located deeper in the membrane for both short (negative mismatch) and long (positive mismatch) TMHs than for poly-Leu segments of intermediate length. We further find that the position-specific effect of Lys residues on the location of short TMHs in the membrane varies with an apparent helical periodicity when the Lys residue is moved along the poly-Leu stretch. We discuss these findings in the context of models for peptide-lipid interactions during hydrophobic mismatch.

journal_name

FEBS Lett

journal_title

FEBS letters

authors

Monné M,von Heijne G

doi

10.1016/s0014-5793(01)02415-2

keywords:

subject

Has Abstract

pub_date

2001-05-11 00:00:00

pages

96-100

issue

2-3

eissn

0014-5793

issn

1873-3468

pii

S0014-5793(01)02415-2

journal_volume

496

pub_type

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