Abstract:
:The genome of Japanese iris necrotic ring virus (JINRV) consists of a positive-sense ssRNA of 4014 nucleotides with six major open reading frames (ORFs). A 5'-non-coding region of 31 nucleotides precedes the first initiation codon. Like Carnation mottle virus (CarMV), the 5'-proximal three ORFs encode a 26 kDa protein (p26) and two readthrough proteins, i.e. an 85 kDa putative RNA replicase (p85) and a 99 kDa protein (p99). The central ORF encodes a small 8 kDa protein (p8). The 3'-proximal ORF encodes a 38 kDa capsid protein (p38). Another ORF encoding a 12 kDa protein (p12) overlaps the p99 ORF.JINRV RNA treated with bacterial alkaline phosphatase and tobacco acid pyrophosphatase could not be ligated to an oligoribonucleotide using T4 RNA ligase, indicating that the 5' end of the viral RNA is uncapped. The 3' end is not polyadenylated. Comparison of the genomic organization and the predicted amino acid sequences with those of other viruses confirmed that JINRV should be classified as a member of the genus Carmovirus, family Tombusviridae.
journal_name
Arch Viroljournal_title
Archives of virologyauthors
Takemoto Y,Kanehira T,Shinohara M,Yamashita S,Hibi Tdoi
10.1007/s007050050054keywords:
subject
Has Abstractpub_date
2000-01-01 00:00:00pages
651-7issue
3eissn
0304-8608issn
1432-8798journal_volume
145pub_type
杂志文章abstract::Translation of poliovirus RNA is initiated by entry of ribosomes into the nucleotide sequence (internal ribosomal entry site; IRES) within the 5'-untranslated region (5'-UTR). Efficiency of this translation initiation in rabbit reticulocyte lysates (RRL) was very low and was greatly enhanced by addition of the ribosom...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01310034
更新日期:1994-01-01 00:00:00
abstract::We discovered a soybean mosaic virus (SMV) variant (4278-1) that caused systemic infections in Nicotiana benthamiana plants, resulting in stem stunting and leaf shriveling. The virus had a particle morphology and incubation period similar to those of other SMV isolates but differed from them in the leaf symptoms it ca...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-016-3123-1
更新日期:2017-02-01 00:00:00
abstract::Novel protoparvoviruses genetically related to human and non-human primate bufaviruses (BuVs) have been detected recently in respiratory and enteric specimens collected from dogs and cats. In this study, by molecular screening of archival collections of faecal samples from wolves and foxes, we detected BuVs with a rat...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-019-04304-y
更新日期:2019-09-01 00:00:00
abstract::The amino acid sequences of the regions encoding the structural proteins of eleven nepoviruses and five comoviruses, two genera of the family Comoviridae, have been aligned. The properties predicted by computer analysis (three-dimensional-3D-structure, hydrophobicity) are also correlated along this alignment, and alig...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01322691
更新日期:1995-01-01 00:00:00
abstract::Avian leukosis virus subgroup J (ALV-J) is an avian oncogenic retrovirus that has caused severe economic losses in China. Gp85 protein is the main envelope protein and the most variable structural protein of ALV-J. It is also involved in virus neutralization. In this study, a specific monoclonal antibody, 4A3, was pro...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-014-2318-6
更新日期:2015-04-01 00:00:00
abstract::In March 2020, following the annual International Committee on Taxonomy of Viruses (ICTV) ratification vote on newly proposed taxa, the phylum Negarnaviricota was amended and emended. At the genus rank, 20 new genera were added, two were deleted, one was moved, and three were renamed. At the species rank, 160 species ...
journal_title:Archives of virology
pub_type: 新闻
doi:10.1007/s00705-020-04731-2
更新日期:2020-12-01 00:00:00
abstract::Cotton leaf curl disease (CLCuD) is a major limitation to cotton production on the Indian subcontinent. A survey for viruses causing CLCuD was conducted during the 2009 and 2010 cropping seasons in the northwestern Indian cotton-growing belt in the states of Punjab, Haryana and Rajasthan. Partial sequences of 258 and ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-012-1225-y
更新日期:2012-05-01 00:00:00
abstract::Morbillivirus infection of marine mammals has been documented across all of the world's oceans. Whilst infection is generally demonstrated using a variety of histopathological and serological techniques, where possible, the use of molecular techniques is being used to enable accurate genetic typing of virus strains th...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-011-1042-8
更新日期:2011-10-01 00:00:00
abstract::A study was made of the phylogenetic relationships between fifteen complete nucleotide sequences as well as 43 nucleotide sequences of the putative coat protein gene of different strains belonging to the virus species Beak and feather disease virus obtained from 39 individuals of 16 psittacine species. The species inc...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-004-0368-x
更新日期:2004-12-01 00:00:00
abstract::The process of fusion from without (FFWO) induced by herpes simplex virus (HSV) was analyzed by using various inhibitors and compared to fusion from within (FFWI). The fate of certain elements of the cytoskeleton after FFWO was also investigated. Our experiments demonstrate FFWO as a very suitable system for study of ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01310490
更新日期:1991-01-01 00:00:00
abstract::Viral infections of the central nervous system (CNS) following peripheral inoculation of Sindbis viruses were studied. The use of viral strains, which vary in their neuroinvasive and neurovirulent properties, and various strains of mice, which differ in immunocompetence, revealed several pathways of viral neuroinvasio...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050050576
更新日期:1999-01-01 00:00:00
abstract::Transgenic mice were produced by microinjection of a partial hepatitis C virus (HCV) genome sequence including the structural protein region, under the control of the albumin promoter and enhancer into fertilized eggs of C57BL/6 and BDF1 mice. Three founders carrying at least five copies of the transgene but not expre...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01718169
更新日期:1996-01-01 00:00:00
abstract::orf124 (ac124) of AcMNPV is one of the highly conserved unique genes in group I lepidopteran nucleopolyhedroviruses. So far, its function remains unknown. In this study, infection with a virus expressing an ac124-gfp fusion showed that Ac124 localized to the cytoplasm throughout the infection. In addition, an ac124 kn...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-014-2277-y
更新日期:2015-01-01 00:00:00
abstract::Gangliosides from different cells were tested for their inhibiting activity on VSV attachment to CER cells and goose erythrocytes. This inhibiting activity was enhanced when gangliosides were inserted into liposomes, in particular if containing phosphatidylserine. ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01310981
更新日期:1987-01-01 00:00:00
abstract::Establishment of a persistent infection of Spodoptera frugiperda nuclear polyhedrosis virus (NPV) in Spodoptera frugiperda (S.f.) cells occurred in three phases: the first phase was characterised by high levels of cell infection and death, the second phase by decreasing cell infection levels leading to the final phase...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01310859
更新日期:1983-01-01 00:00:00
abstract::Since the appearance of resistance to antiretroviral treatment is unavoidable, the host cell's transcription factor NF-kappaB is a novel HIV target. The goal of this study was to characterize the effect of two immunomodulators, curcumin (Cur) and sulfasalazine (Sul), with a protease inhibitor, indinavir (IDV), on HIV-...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-007-0023-4
更新日期:2008-01-01 00:00:00
abstract::Since late 2018, foot-and-mouth disease (FMD) has reemerged and rapidly swept through pig farms in North and Central Vietnam, despite widespread use of commercial FMD vaccines. To investigate the FMD virus (FMDV) strains responsible for the current epidemics, 40 FMDV samples were collected from 17 provinces during Nov...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-020-04763-8
更新日期:2020-11-01 00:00:00
abstract::One hundred sixteen rats (Rattus rattus) captured in Indonesia from 2011 to 2012 were investigated for the prevalence of hepatitis E virus (HEV)-specific antibodies and HEV RNA. Using an ELISA based on HEV genotype 4 with an ad hoc cutoff value of 0.500, 18.1 % of the rats tested positive for anti-HEV IgG. By nested R...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-012-1462-0
更新日期:2013-01-01 00:00:00
abstract::Human peripheral blood mononuclear cells (PBMC) can be infected in vitro with sera of hepatitis C virus (HCV)-infected patients. We have treated pools of PBMC with dextran sulfate MW 8,000, before infection with various HCV(+) sera. When the cells were treated with dextran sulfate 10-3 M, HCV RNA was no longer detecta...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050050293
更新日期:1998-01-01 00:00:00
abstract::A coxsackievirus B3 (CVB3) cDNA clone, upon transfection of HeLa cells, produces CVB3 capable of induction of cardiac inflammation in C3H/He mice by day 8 post inoculation (p.i.). Liver and serum are cleared of CVB3 by day 8 p.i., but CVB3 persists in the heart through day 14. The nucleotide sequence and the predicted...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01317202
更新日期:1992-01-01 00:00:00
abstract::At necropsy, several dogs which died showing symptoms of hemorrhagic diarrhea, had significant lesions of the mucosa that were found especially in the duodenum and upper part of the small bowel. Study of ultrathin sections from the diseased mucosa revealed particles resembling parvoviruses in altered nuclei of cells o...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01320586
更新日期:1979-01-01 00:00:00
abstract::Attenuated, gene-deletion mutants of pseudorabies virus (PRV) were tested for their ability to establish a reactivatable latent infection in pigs. The viruses (designated A, B, and C) were from each of three vaccines commercially available in the United States. Viruses A and C were similar in that they had genetically...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01310949
更新日期:1991-01-01 00:00:00
abstract::Interleukin-2 dependent feline T-lymphoblastoid cells designated as MYA-1 cells were established. The cells were free from exogenous retroviruses and sensitive for replication of feline immunodeficiency virus (FIV). FIV can grow more efficiently in MYA-1 cells than in feline primary peripheral blood mononuclear cells....
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01313750
更新日期:1989-01-01 00:00:00
abstract::A number of viruses and viral proteins interact with a dynamic sub-nuclear structure called the nucleolus. The nucleolus is present during interphase in mammalian cells and is the site of ribosome biogenesis, and has been implicated in controlling regulatory processes such as the cell cycle. Viruses interact with the ...
journal_title:Archives of virology
pub_type: 杂志文章,评审
doi:10.1007/s00705-001-0792-0
更新日期:2002-06-01 00:00:00
abstract::Synthesis of the Epstein-Barr virus (EBV) associated early antigen (EA) can be induced by a variety of agents in Raji cells, a latently EBV-infected Burkitt lymphoma line. We investigated the role of lipoproteins in this EA induction system. Cell growth was not affected by lipoprotein-deficiency, but EA induction by m...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01313877
更新日期:1989-01-01 00:00:00
abstract::We examined the pattern of the N gene-mediated systemic hypersensitive response (HR), which was induced by tobacco mosaic virus upon temperature shift, and analyzed the distribution of the coat protein and the virus-encoded 126 kDa replicase protein (126 K protein) by immunoblot analysis. In the middle- and lower-posi...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-004-0373-0
更新日期:2004-11-01 00:00:00
abstract::We detected a novel bovine hepacivirus N (HNV) subtype, IME_BovHep_01, in the serum of cattle in Tengchong, Yunnan, China, by high-throughput sequencing. The complete genome of IME_BovHep_01, was sequenced using an Illumina MiSeq sequencer and found to be 8850 nt in length, encoding one hypothetical protein. BLASTn an...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-020-04611-9
更新日期:2020-06-01 00:00:00
abstract::To identify the protein encoded by the L7 region of bovine adenovirus-3 (BAdV-3), specific antisera were raised by immunizing rabbits with bacterial fusion proteins encoding the N-terminus or C-terminus of the BAdV-3 fiber protein. Immunoprecipitation and Western blot analysis confirmed that the fiber is expressed as ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-004-0323-x
更新日期:2004-09-01 00:00:00
abstract::The long distance movement of potyviruses is a poorly understood step of the viral cycle. Only factors inhibiting this process, referred to as "Restricted TEV Movement" (RTM), have been identified in Arabidopsis thaliana. On the virus side, the potyvirus coat protein (CP) displays determinants required for long-distan...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-017-3292-6
更新日期:2017-07-01 00:00:00
abstract::The DNAs from nine Japanese field isolates of equine herpesvirus-1 (EHV-1) were analyzed by digestion with the restriction endonuclease Bam HI and Southern hybridization. Comparing restriction profiles among the EHV-1 strains, there was no considerable difference between isolates before and after vaccine application, ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01316881
更新日期:1993-01-01 00:00:00