Deep sequencing of Cotesia vestalis bracovirus reveals the complexity of a polydnavirus genome.

Abstract:

:Here we completed the whole genome sequence of Cotesia vestalis bracovirus (CvBV) by deep sequencing and compared the genome features of CvBV to those of other polydnaviruses (PDVs). The genome is 540,215 base pairs divided into 35 genomic segments that range from 2.6 to 39.2kb. Comparison of CvBV with other PDVs shows that more segments are found, including new segments that have no corresponding segments in other phylogenetically related PDVs, which suggests that there might be still more segments not being sequenced in the present known PDVs. We identified eight gene families and five genes in CvBV, including new genes which were first found in PDVs. Strikingly, we identified a putative helicase protein displaying similarity to human Pif1 helicase, which has never been reported for other PDVs. This finding will bring new insights in research of these special viruses.

journal_name

Virology

journal_title

Virology

authors

Chen YF,Gao F,Ye XQ,Wei SJ,Shi M,Zheng HJ,Chen XX

doi

10.1016/j.virol.2011.03.009

subject

Has Abstract

pub_date

2011-05-25 00:00:00

pages

42-50

issue

1

eissn

0042-6822

issn

1096-0341

pii

S0042-6822(11)00126-7

journal_volume

414

pub_type

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