Cytokine-dependent activation of JAK-STAT pathway in Saccharomyces cerevisiae.

Abstract:

:Protein phosphorylation is an important post-translational modification for intracellular signaling molecules, mostly found in serine and threonine residues. Tyrosine phosphorylations are very few events (less than 0.1% to phosphorylated serine/threonine residues), but capable of governing cell fate decisions involved in proliferation, differentiation, apoptosis, and oncogenic transformation. Hence, it is important for drug discovery and system biology to measure the intracellular level of phosphotyrosine. Although mammalian cells have been conventionally utilized for this purpose, accurate determination of phosphotyrosine level often suffers from high background due to the unexpected crosstalk among endogenous signaling molecules. This situation led us firstly to establish the ligand-induced activation of homomeric receptor tyrosine kinase (i.e., epidermal growth factor receptor) in Saccharomyces cerevisiae, a lower eukaryote possessing organelles similar to higher eukaryote but not showing substantial level of tyrosine kinase activity. In this study, we expressed heteromeric receptor tyrosine kinase (i.e., a complex of interleukin-5 receptor (IL5R) α chain, common β chain, and JAK2 tyrosine kinase) in yeast. When coexpressed with a cell wall-anchored form of IL5, the yeast exerted the autophosphorylation of JAK2, followed by the phosphorylation of transcription factor STAT5a and subsequent nuclear accumulation of phosphorylated STAT5a. Taken together, yeast could be an ideal host for sensitive detection of phosphotyrosine generated by a wide variety of tyrosine kinases. Biotechnol. Bioeng. 2016;113: 1796-1804. © 2016 Wiley Periodicals, Inc.

journal_name

Biotechnol Bioeng

authors

Yoshimoto N,Ikeda Y,Tatematsu K,Iijima M,Nakai T,Okajima T,Tanizawa K,Kuroda S

doi

10.1002/bit.25948

subject

Has Abstract

pub_date

2016-08-01 00:00:00

pages

1796-804

issue

8

eissn

0006-3592

issn

1097-0290

journal_volume

113

pub_type

杂志文章
  • Insect larval expression process is optimized by generating fusions with green fluorescent protein.

    abstract::The insect larvae/baculovirus protein production process was dramatically simplified by expressing fusion proteins containing green fluorescent protein (GFP) and the product-of-interest. In this case, human interleukin-2 (hIL-2) and chloramphenicol acetyl-transferase (CAT) were model products. Specifically, our fusion...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0290(19991105)65:3<316::aid-bit

    authors: Cha HJ,Dalal NG,Pham MQ,Vakharia VN,Rao G,Bentley WE

    更新日期:1999-11-05 00:00:00

  • Enhanced acetone-butanol fermentation using repeated fed-batch operation coupled with cell recycle by membrane and simultaneous removal of inhibitory products by adsorption.

    abstract::A novel acetone-butanol production process was developed which integrates a repeated fed-batch fermentation with continuous product removal and cell recycle. The inhibitory product concentrations of the fermentation by Clostridium acetobutylicum were reduced by the simultaneous extraction process using polyvinylpyridi...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260470405

    authors: Yang X,Tsao GT

    更新日期:1995-08-20 00:00:00

  • Theory and applications of unstructured growth models: Kinetic and energetic aspects.

    abstract::Microbial kinetics and energetics are discussed in connection with the formulation of unstructured growth models. The development of microbial energetics and the use of macroscopic methods in the study of microbial growth are briefly evaluated. The general approach to the modelling of microbial growth has been critica...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260251202

    authors: Esener AA,Roels JA,Kossen NW

    更新日期:1983-12-01 00:00:00

  • Relationship between mass transfer coefficient and liquid flow velocity in heterogenous biofilms using microelectrodes and confocal microscopy.

    abstract::The relationship between local mass transfer coefficient and fluid velocity in heterogenous biofilms was investigated by combining microelectrodes and confocal scanning laser microscopy (CSLM). The biofilms were grown for up to 7 days and consisted of cell clusters separated by interstitial channels. Mass transfer coe...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/(SICI)1097-0290(19971220)56:6<681::AID-BIT

    authors: Stoodley P,Yang S,Lappin-Scott H,Lewandowski Z

    更新日期:1997-12-20 00:00:00

  • Predictions for oxygen supply control to enhance population stability of engineered production strains.

    abstract::The simultaneous growth and product formation in a microbial culture is an important feature of several laboratory, industrial, and environmental bioprocesses. Metabolic burden associated with product formation in these bioprocesses may lead to growth advantage of a nonproducing mutant leading to a loss of the produci...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260430403

    authors: Varma A,Palsson BO

    更新日期:1994-02-20 00:00:00

  • Quantitative assessment of uncertainty in the optimization of metabolic pathways.

    abstract::The S-System formalism provides a popular, versatile and mathematically tractable representation of metabolic pathways. At steady-state, after a logarithmic transformation, the S-System representation reduces into a system of linear equations. Thus, the maximization of a particular metabolite concentration or a flux s...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/(SICI)1097-0290(19971020)56:2<145::AID-BIT

    authors: Petkov SB,Maranas CD

    更新日期:1997-10-20 00:00:00

  • Self-renaturing enzymes: design of an enzyme-chaperone chimera as a new approach to enzyme stabilization.

    abstract::Molecular chaperones in aqueous-organic mixtures can broaden the utility of biocatalysis by stabilizing enzymes in denaturing conditions. We have designed a self-renaturing enzyme-chaperone chimera consisting of penicillin amidase and a thermophilic chaperonin that functions in aqueous-organic mixtures. The flexible l...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.22254

    authors: Bergeron LM,Gomez L,Whitehead TA,Clark DS

    更新日期:2009-04-01 00:00:00

  • Display of lipase on the cell surface of Escherichia coli using OprF as an anchor and its application to enantioselective resolution in organic solvent.

    abstract::We have developed a new cell surface display system using a major outer membrane protein of Pseudomonas aeruginosa OprF as an anchoring motif. Pseudomonas fluorescens SIK W1 lipase gene was fused to the truncated oprF gene by C-terminal deletion fusion strategy. The truncated OprF-lipase fusion protein was successfull...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.20399

    authors: Lee SH,Choi JI,Han MJ,Choi JH,Lee SY

    更新日期:2005-04-20 00:00:00

  • Plasmid DNA transfection using magnetite cationic liposomes for construction of multilayered gene-engineered cell sheet.

    abstract::Modification of cellular functions by overexpression of genes is being increasingly practiced for tissue engineering. In the present study, we investigated whether transfection efficiency could be enhanced by magnetofection that involves the use of plasmid DNA (pDNA)/magnetite cationic liposomes (MCLs) complexes (pDNA...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21738

    authors: Ino K,Kawasumi T,Ito A,Honda H

    更新日期:2008-05-01 00:00:00

  • Gut-liver on a chip toward an in vitro model of hepatic steatosis.

    abstract::Hepatic steatosis is a process of abnormal lipid deposition within the liver cells, often caused by excessive alcohol uptake or obesity. A conventional in vitro model for hepatic steatosis uses a liver cell culture, treated with fatty acids and measures accumulation of lipids within the cells. This model does not reca...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.26793

    authors: Lee SY,Sung JH

    更新日期:2018-11-01 00:00:00

  • Synthesis of polyketides from low cost substrates by the thermotolerant yeast Kluyveromyces marxianus.

    abstract::Kluyveromyces marxianus is a promising nonconventional yeast for biobased chemical production due to its rapid growth rate, high TCA cycle flux, and tolerance to low pH and high temperature. Unlike Saccharomyces cerevisiae, K. marxianus grows on low-cost substrates to cell densities that equal or surpass densities in ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.26976

    authors: McTaggart TL,Bever D,Bassett S,Da Silva NA

    更新日期:2019-07-01 00:00:00

  • Redesigning metabolic networks using mathematical programming

    abstract::The design of new generation bioprocessing plants is increasingly dependent on the design of process-compatible microorganisms. The latter, whether through genetic or physiological manipulations, can be greatly assisted by metabolic engineering. An emerging powerful tool in metabolic engineering research is computer-a...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0290(19980420)58:2/3<267::aid-b

    authors: Dean JP,Dervakos GA

    更新日期:1998-04-05 00:00:00

  • Analysis of the coupled transport, reaction, and deactivation phenomena in the immobilized glucose oxidase and catalase system.

    abstract::In a previous paper, the overall or macrokinetics of the immobilized glucose oxidase--catalase system has been presented. In this paper a detailed analysis of the interaction of diffusion and reaction in this system will be presented. The mathematical treatment includes two consecutive reactions with two-substrate kin...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260211112

    authors: Reuss M,Buchholz K

    更新日期:1979-11-01 00:00:00

  • Improvement of Escherichia coli microaerobic oxygen metabolism by Vitreoscilla hemoglobin: New insights from NAD(P)H fluorescence and culture redox potential.

    abstract::On-line NAD(P)H fluorescence and culture redox potential (CRP) measurements were utilized to investigate the role of Vitreoscilla hemoglobin (VHb) in perturbing oxygen metabolism of microaerobic Escherichia coli Batch cultures of a VHb-synthesizing E. coli strain and the iso-genic control under fully aerated condition...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260470309

    authors: Tsai PS,Rao G,Bailey JE

    更新日期:1995-08-05 00:00:00

  • Metabolite and isotopomer balancing in the analysis of metabolic cycles: I. Theory.

    abstract::Proper analysis of label distribution in metabolic pathway intermediates is critical for correct interpretation of experimental data and strategic experimental design. While, for example, 13C nuclear magnetic resonance (NMR) spectroscopy is usually limited to the measurement of degrees of 13C enrichment, more informat...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0290(19990220)62:4<375::aid-bit

    authors: Klapa MI,Park SM,Sinskey AJ,Stephanopoulos G

    更新日期:1999-02-01 00:00:00

  • Uptake of cadmium and zinc by the alga Chlorella vulgaris: part 1. Individual ion species.

    abstract::The ability of algae and bacteria to accumulate heavy metals from the surrounding environment is a widely recognized phenomenon that has a number of important implications. This work reports on the development of a quantitative model that addresses the basic mechanisms inherent in many uptake processes. The model post...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260340713

    authors: Ting YP,Lawson F,Prince IG

    更新日期:1989-10-05 00:00:00

  • Surface display of MPH on Pseudomonas putida JS444 using ice nucleation protein and its application in detoxification of organophosphates.

    abstract::Methyl parathion hydrolase (MPH) has been displayed on the surface of microorganisms for the first time using only N- and C-terminal domains of the ice nucleation protein (INPNC) from Pseudomonas syringae INA5 as an anchoring motif. A shuttle vector pINCM coding for INPNC-MPH was constructed and used to target MPH ont...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21535

    authors: Yang C,Cai N,Dong M,Jiang H,Li J,Qiao C,Mulchandani A,Chen W

    更新日期:2008-01-01 00:00:00

  • Effect of hydration on the morphology of enzyme powder.

    abstract::We report the first direct images of the hydration of protein powders. Using an environmental scanning electron microscope (ESEM) we have taken a series of micrographs of a region of the enzyme (subtilisin) power whilst hydrating the sample. In addition, the sample has been viewed during exposure to toluene vapors. Th...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260391114

    authors: Roziewski K,Russell AJ

    更新日期:1992-05-01 00:00:00

  • Removal of color from kraft mill wastewaters with cultures of white-rot fungi and with immobilized mycelium of Coriolus versicolor.

    abstract::Screening fifteen strains of white-rot fungi for their ability to decolorize combined bleached kraft effluent showed that Coriolus versicolor in liquid culture removed over 60% of the color of the effluent within six days in the presence of sucrose. Treatment of the same effluent with this fungus, immobilized in beads...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260250814

    authors: Livernoche D,Jurasek L,Desrochers M,Dorica J,Veliky IA

    更新日期:1983-08-01 00:00:00

  • High-throughput identification of factors promoting neuronal differentiation of human neural progenitor cells in microscale 3D cell culture.

    abstract::Identification of conditions for guided and specific differentiation of human stem cell and progenitor cells is important for continued development and engineering of in vitro cell culture systems for use in regenerative medicine, drug discovery, and human toxicology. Three-dimensional (3D) and organotypic cell cultur...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.26839

    authors: Nierode GJ,Gopal S,Kwon P,Clark DS,Schaffer DV,Dordick JS

    更新日期:2019-01-01 00:00:00

  • Three-dimensional fibrous PLGA/HAp composite scaffold for BMP-2 delivery.

    abstract::A protein loaded three-dimensional scaffold can be used for protein delivery and bone tissue regeneration. The main objective of this project was to develop recombinant human bone morphogenetic protein-2 (rhBMP-2) loaded poly(D,L-lactide-co-glycolide)/hydroxylapatite (PLGA/HAp) composite fibrous scaffolds through a pr...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21517

    authors: Nie H,Soh BW,Fu YC,Wang CH

    更新日期:2008-01-01 00:00:00

  • Oxygen uptake rates and liver-specific functions of hepatocyte and 3T3 fibroblast co-cultures.

    abstract::Bioartificial liver (BAL) devices have been developed to treat patients undergoing acute liver failure. One of the most important parameters to consider in designing these devices is the oxygen consumption rate of the seeded hepatocytes which are known to have oxygen consumption rates 10 times higher than most other c...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21225

    authors: Cho CH,Park J,Nagrath D,Tilles AW,Berthiaume F,Toner M,Yarmush ML

    更新日期:2007-05-01 00:00:00

  • Increasing parvovirus filter throughput of monoclonal antibodies using ion exchange membrane adsorptive pre-filtration.

    abstract::Pre-filtration using ion exchange membrane adsorbers can improve parvovirus filter throughput of monoclonal antibodies (mAbs). The membranes work by binding trace foulants, and although some antibody product also binds, yields > or =99% are easily achieved by overloading. Results show that foulant adsorption is depend...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.22729

    authors: Brown A,Bechtel C,Bill J,Liu H,Liu J,McDonald D,Pai S,Radhamohan A,Renslow R,Thayer B,Yohe S,Dowd C

    更新日期:2010-07-01 00:00:00

  • Mutant Escherichia coli penicillin acylase with enhanced stability at alkaline pH.

    abstract::Increased stability at alkaline pH should be a valuable attribute for the utilization of penicillin acylase in bioreactors employed to convert penicillins into 6-aminopenicillanic acid, a precursor of semisynthetic penicillins. In these systems, base is added for pH control, which results in local alkaline conditions ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260480208

    authors: Del Río G,Rodríguez ME,Munguía ME,López-Munguí A,Soberón X

    更新日期:1995-10-20 00:00:00

  • Modeling brewers' yeast flocculation

    abstract::Flocculation of yeast cells occurs during the fermentation of beer. Partway through the fermentation the cells become flocculent and start to form flocs. If the environmental conditions, such as medium composition and fluid velocities in the tank, are optimal, the flocs will grow in size large enough to settle. After ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0290(19980205)57:3<330::aid-bit

    authors: van Hamersveld EH,van der Lans RG,Caulet PJ,Luyben KC

    更新日期:1998-02-05 00:00:00

  • Bioartificial kidney. I. Theoretical analysis of convective flow in hollow fiber modules: application to a bioartificial hemofilter.

    abstract::Analytical expressions describing convective flow in a continuous arteriovenous hollow fiber hemofilter were developed. In the lumen of the hollow fiber membrane, existing analytical expressions were applied to describe velocity profiles and pressure. For flow in the shell (the extracapillary space separating the fibe...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:

    authors: Moussy Y

    更新日期:2000-04-20 00:00:00

  • Mode of action and properties of xylanase and beta-Xylosidase from Neurospora crassa.

    abstract::Extracellular beta-xylosidase (1,4-beta-D-xylan xylohydrolase, EC 3.2.1.37) from culture filtrates of Neurospora crassa was purified to homogeneity by preparative isoelectric focusing followed by gel electrophoresis. The molecular weight of the purified xylosidase was 83,000 D and the K(m) on p-nitrophenyl-beta-D-xylo...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260281210

    authors: Deshpande V,Lachke A,Mishra C,Keskar S,Rao M

    更新日期:1986-12-01 00:00:00

  • Photosynthetic performance of a helical tubular photobioreactor incorporating the cyanobacterium spirulina platensis.

    abstract::The photosynthetic performance of a helical tubular photobioreactor ("Biocoil"), incorporating the filamentous cyanobacterium Spirulina platensis, was investigated. The photobioreactor was constructed in a cylindrical shape (0.9 m high) with a 0.25-m(2)basal area and a photostage comprising 60 m of transparent PVC tub...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260470218

    authors: Watanabe Y,de la Noüe J,Hall DO

    更新日期:1995-07-20 00:00:00

  • Biomanufacturing of value-added products from oils or fats: A case study on cellular and fermentation engineering of Yarrowia lipolytica.

    abstract::The United States produces more than 10 million tons of waste oils and fats each year. This paper aims to establish a new biomanufacturing platform that converts waste oils or fats into a series of value-added products. Our research employs the oleaginous yeast Yarrowia lipolytica as a case study for citric acid (CA) ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.27685

    authors: Liu N,Soong YV,Mirzaee I,Olsen A,Yu P,Wong HW,Xie D

    更新日期:2021-01-20 00:00:00

  • Bcl-xL expression interferes with the effects of L-glutamine supplementation on hybridoma cultures.

    abstract::While feeding protocols and ectopic expression of anti-apoptotic genes have been used to improve the viability of hybridoma cell lines, the effect of the expression levels of survival genes on the behavior of hybridomas following nutrient supplementation is unknown. In this study, we compared the behavior of the Sp2/0...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.10467

    authors: Charbonneau JR,Furtak T,Lefebvre J,Gauthier ER

    更新日期:2003-02-05 00:00:00