Nucleotide sequence of gene 6 of avian-like group A rotavirus 993/83.

Abstract:

:Two cDNA clones, which hybridized in Northern blots to RNA segment 6 of the homologous avian-like group A rotavirus (RV) 993/83 and pigeon RV PO-13, but not to mammalian group A rotaviruses, were sequenced. The gene 6 sequence contained a single long open reading frame encoding a protein of 397 amino acids (total MW 44,460). Comparison of the deduced amino acid sequence with VP6 protein from mammalian group A RV revealed 72 to 74.3% of amino acid identity. These values are surprisingly low in view of the high homology levels described up to now for group A RV. Avian-like RV 993/83 is however not a missing link between group A and C RV as it is as distantly related to group C RV as group A mammalian RV to group C RV. The evolutionary implications of these observations are briefly discussed.

journal_name

Virology

journal_title

Virology

authors

Rohwedder A,Irmak H,Werchau H,Brüssow H

doi

10.1006/viro.1993.1437

subject

Has Abstract

pub_date

1993-08-01 00:00:00

pages

820-5

issue

2

eissn

0042-6822

issn

1096-0341

pii

S0042-6822(83)71437-6

journal_volume

195

pub_type

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