A peptide hairpin inhibitor of amyloid beta-protein oligomerization and fibrillogenesis.

Abstract:

:Amyloid beta-protein (Abeta) self-assembly is linked strongly to Alzheimer's disease. We found that PP-Leu, a tridecapeptide analogue of broad-spectrum antiviral peptides termed theta-defensins, potently inhibits Abeta oligomer and fibril formation. This effect appeared to be mediated through sequestration of the amyloidogenic Abeta peptide in colloid-like assemblies. PP-Leu comprises a turn formed by a d-Pro-l-Pro amino acid dyad and stabilized by a disulfide bond, a motif that was exceptionally resistant to endoproteinase K digestion. This combination of assembly inhibitory activity and protease resistance suggests that PP-Leu may have potential therapeutic value.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Yamin G,Ruchala P,Teplow DB

doi

10.1021/bi901325g

subject

Has Abstract

pub_date

2009-12-08 00:00:00

pages

11329-31

issue

48

eissn

0006-2960

issn

1520-4995

journal_volume

48

pub_type

杂志文章
  • Interaction of tRNAs and of phosphorothioate-substituted nucleic acids with an organomercurial. Probing the chemical environment of thiolated residues by affinity electrophoresis.

    abstract::The interactions of 4-thiouridine and 5-[(methylamino)methyl]-2-thiouridine in tRNA and of phosphorothioate esters in nucleic acids with an organomercurial have been investigated. For this purpose, an affinity electrophoretic system has been developed in which the mercury derivative has been covalently immobilized in ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00410a048

    authors: Igloi GL

    更新日期:1988-05-17 00:00:00

  • Binding of protein synthesis initiation factor 4E to oligoribonucleotides: effects of cap accessibility and secondary structure.

    abstract::The binding of rabbit globin mRNA to the 25-kDa cap binding protein eIF-4E from human erythrocytes was found to be 5.3-fold stronger than the binding of the cap analogue m7GpppG to eIF-4E [Gross et al. (1990) Biochemistry 29, 5008-5012]. In order to investigate whether this effect is due to the longer sequence of nucl...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00120a020

    authors: Carberry SE,Friedland DE,Rhoads RE,Goss DJ

    更新日期:1992-02-11 00:00:00

  • Pyrroloquinoline quinone biogenesis: demonstration that PqqE from Klebsiella pneumoniae is a radical S-adenosyl-L-methionine enzyme.

    abstract::Biogenesis of pyrroloquinoline quinone (PQQ) in Klebsiella pneumoniae requires the expression of six genes (pqqA-F). One of these genes (pqqE) encodes a 43 kDa protein (PqqE) that plays a role in the initial steps in PQQ formation [Veletrop, J. S., et al. (1995) J. Bacteriol. 177, 5088-5098]. PqqE contains two highly ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi900918b

    authors: Wecksler SR,Stoll S,Tran H,Magnusson OT,Wu SP,King D,Britt RD,Klinman JP

    更新日期:2009-10-27 00:00:00

  • Factors affecting the stability and conformation of Locusta migratoria apolipophorin III.

    abstract::Apolipophorin III (apoLp-III) from the migratory locust, Locusta migratoria, represents the only full-length apolipoprotein whose three-dimensional structure has been solved. In the present study, spectroscopic methods have been employed to investigate the effects of deglycosylation (via endoglycosidase F treatment) a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00178a019

    authors: Weers PM,Kay CM,Oikawa K,Wientzek M,Van der Horst DJ,Ryan RO

    更新日期:1994-03-29 00:00:00

  • Effects of select histidine to cysteine mutations on transcriptional regulation by Escherichia coli RcnR.

    abstract::The RcnR metalloregulator represses the transcription of the Co(II) and Ni(II) exporter, RcnAB. Previous studies have shown that Co(II) and Ni(II) bind to RcnR in six-coordinate sites, resulting in derepression. Here, the roles of His60, His64, and His67 in specific metal recognition are examined. His60 and His64 corr...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi300886q

    authors: Higgins KA,Hu HQ,Chivers PT,Maroney MJ

    更新日期:2013-01-08 00:00:00

  • Purification and characterization of the purE, purK, and purC gene products: identification of a previously unrecognized energy requirement in the purine biosynthetic pathway.

    abstract::Aminoimidazole riobnucleotide carboxylase, the sixth step in the purine biosynthetic pathway, catalyzes the conversion of aminoimidazole ribonucleotide (AIR) to carboxyaminoimidazole ribonucleotide (CAIR). The gene products of the purE and purK genes (PurE and PurK, respectively) thought to be responsible for this act...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00136a016

    authors: Meyer E,Leonard NJ,Bhat B,Stubbe J,Smith JM

    更新日期:1992-06-02 00:00:00

  • Peptidyl boronates inhibit Salmonella enterica serovar Typhimurium Lon protease by a competitive ATP-dependent mechanism.

    abstract::Lon is a homo-oligomeric ATP-dependent serine protease that functions in the degradation of damaged and certain regulatory proteins. This enzyme has emerged as a novel target in the development of antibiotics because of its importance in conferring bacterial virulence. In this study, we explored the mechanism by which...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi7002789

    authors: Frase H,Lee I

    更新日期:2007-06-05 00:00:00

  • Interaction of the antitumor compound cryptophycin-52 with tubulin.

    abstract::Cryptophycin-52 (LY355703) is currently undergoing clinical evaluation for cancer chemotherapy. It is a potent suppressor of microtubule dynamics in vitro, and low picomolar concentrations appear to inhibit cancer cell proliferation at mitosis by stabilizing spindle microtubules. In the present study, using [(3)H]cryp...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0010827

    authors: Panda D,Ananthnarayan V,Larson G,Shih C,Jordan MA,Wilson L

    更新日期:2000-11-21 00:00:00

  • Crystal structure of an electron-transfer complex between methylamine dehydrogenase and amicyanin.

    abstract::The crystal structure of the complex between the quinoprotein methylamine dehydrogenase (MADH) and the type I blue copper protein amicyanin, both from Paracoccus denitrificans, has been determined at 2.5-A resolution using molecular replacement. The search model was MADH from Thiobacillus versutus. The amicyanin could...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00136a006

    authors: Chen L,Durley R,Poliks BJ,Hamada K,Chen Z,Mathews FS,Davidson VL,Satow Y,Huizinga E,Vellieux FM

    更新日期:1992-06-02 00:00:00

  • Analysis and computer simulation of aerobic oxidation of reduced nicotinamide adenine dinucleotide catalyzed by horseradish peroxidase.

    abstract::Under suitable experimental conditions the aerobic oxidation of NADH catalyzed by horseradish peroxidase occurred in four characteristic phases: initial burst, induction phase, steady state, and termination. A trace amount of H2O2 present in the NADH solution brought about initial burst in the formation of oxyperoxida...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00628a024

    authors: Yokota K,Yamazaki I

    更新日期:1977-05-03 00:00:00

  • Thermodynamics of transient conformations in the folding pathway of barnase: reorganization of the folding intermediate at low pH.

    abstract::New classes of small proteins have recently been found that refold rapidly with two-state kinetics from a substantially unfolded conformation ("U") and without the accumulation of a folding intermediate. Barnase, on the other hand, is representative of a class of proteins that display multistate kinetics and refold fr...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi950967t

    authors: Oliveberg M,Fersht AR

    更新日期:1996-02-27 00:00:00

  • Structural insight into how Streptomyces coelicolor maltosyl transferase GlgE binds α-maltose 1-phosphate and forms a maltosyl-enzyme intermediate.

    abstract::GlgE (EC 2.4.99.16) is an α-maltose 1-phosphate:(1→4)-α-d-glucan 4-α-d-maltosyltransferase of the CAZy glycoside hydrolase 13_3 family. It is the defining enzyme of a bacterial α-glucan biosynthetic pathway and is a genetically validated anti-tuberculosis target. It catalyzes the α-retaining transfer of maltosyl units...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi500183c

    authors: Syson K,Stevenson CE,Rashid AM,Saalbach G,Tang M,Tuukkanen A,Svergun DI,Withers SG,Lawson DM,Bornemann S

    更新日期:2014-04-22 00:00:00

  • Sequence-Dependent Promoter Escape Efficiency Is Strongly Influenced by Bias for the Pretranslocated State during Initial Transcription.

    abstract::Abortive transcription initiation can be rate-limiting for promoter escape and therefore represents a barrier to productive gene expression. The mechanism for abortive initiation is unknown, but the amount of abortive transcript is known to vary with the composition of the initial transcribed sequence (ITS). Here, we ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.5b00272

    authors: Skancke J,Bar N,Kuiper M,Hsu LM

    更新日期:2015-07-21 00:00:00

  • Kinetics and thermodynamics of the mechanism of interaction of sodium phytate with alpha-globulin.

    abstract::The precipitation mechanism of alpha-globulin in the presence of myo-inositol hexaphosphate (sodium phytate) was studied in detail. The maximum interaction was found at pH 2.3 where the protein was in a dissociated state having an 8.3S aggregate and a 1.5S monomer. This interaction was predominantly dependent upon the...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00064a035

    authors: Rajendran S,Prakash V

    更新日期:1993-04-06 00:00:00

  • Properties of membrane-inserted protein kinase C.

    abstract::Protein kinase C (PKC) interacted with phospholipid vesicles in a calcium-dependent manner and produced two forms of membrane-associated PKC: a reversibly bound form and a membrane-inserted form. The two forms of PKC were isolated and compared with respect to enzyme stability, cofactor requirements, and phorbol ester ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00420a003

    authors: Bazzi MD,Nelsestuen GL

    更新日期:1988-10-04 00:00:00

  • A deuterium surface coil NMR study of the metabolism of D-methionine in the liver of the anesthetized rat.

    abstract::The hepatic metabolism of deuteriated D-methionine has been studied in the intact, anesthetized rat using 2H NMR spectroscopy. The rate of formation of the principal labeled metabolite, [methyl-2H3]sarcosine, from the D-[methyl-2H3]methionine precursor was found to be as rapid as the rate observed previously in NMR st...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00420a042

    authors: London RE,Gabel SA

    更新日期:1988-10-04 00:00:00

  • A site-specific endonuclease derived from a mutant Trp repressor with altered DNA-binding specificity.

    abstract::Site-directed mutagenesis was used to construct mutant Trp repressors with each of the 38 possible single amino acid changes of the first 2 amino acid residues (Ile79 and Ala80) in the second "recognition" alpha-helix of the helix-turn-helix DNA-binding motif. Eight of these mutant repressors with Ile79 and Ala80 chan...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00203a038

    authors: Pfau J,Arvidson DN,Youderian P,Pearson LL,Sigman DS

    更新日期:1994-09-20 00:00:00

  • A putative Fe2+-bound persulfenate intermediate in cysteine dioxygenase.

    abstract::The common reactions of dioxygen, superoxide, and hydroperoxides with thiolates are thought to proceed via persulfenate intermediates, yet these have never been visualized. Here we report a 1.4 A resolution crystal structure of the Fe(2+)-dependent enzyme cysteine dioxygenase (CDO) containing this putative intermediat...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi801546n

    authors: Simmons CR,Krishnamoorthy K,Granett SL,Schuller DJ,Dominy JE Jr,Begley TP,Stipanuk MH,Karplus PA

    更新日期:2008-11-04 00:00:00

  • Rearrangement of domain elements of the Ca-ATPase in cardiac sarcoplasmic reticulum membranes upon phospholamban phosphorylation.

    abstract::Phospholamban (PLB) is a major target of the beta-adrenergic cascade in the heart, and functions to modulate rate-limiting conformational transitions involving the transport activity of the Ca-ATPase. To investigate structural changes within the Ca-ATPase that result from the phosphorylation of PLB by cAMP-dependent p...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi990599j

    authors: Negash S,Huang S,Squier TC

    更新日期:1999-06-22 00:00:00

  • Effect of erythrocyte transbilayer phospholipid distribution on fusion with vesicular stomatitis virus.

    abstract::To identify the specific component(s) in the target membrane involved in fusion of vesicular stomatitis virus (VSV), we examined the interaction of the virus with human erythrocyte membranes with asymmetric and symmetric bilayer distributions of phospholipids. Fusion was monitored spectrofluorometrically by the octade...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00469a005

    authors: Herrmann A,Clague MJ,Puri A,Morris SJ,Blumenthal R,Grimaldi S

    更新日期:1990-05-01 00:00:00

  • Stability of trimeric OmpF porin: the contributions of the latching loop L2.

    abstract::The channel-forming protein OmpF porin from Escherichia coli spans the bacterial outer membrane. Each of the three monomers comprises a hollow, 16-stranded beta-barrel. These are associated to homotrimers which are unusually stable, due mostly to hydrophobic interactions between the beta-barrels. In addition, a loop, ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi981215c

    authors: Phale PS,Philippsen A,Kiefhaber T,Koebnik R,Phale VP,Schirmer T,Rosenbusch JP

    更新日期:1998-11-10 00:00:00

  • Influence of the photosystem I-light harvesting complex I antenna domains on fluorescence decay.

    abstract::The time-resolved fluorescence decay of plant PSI-LHCI has been analyzed and compared with its component parts, the PSI core and the peripheral antenna LHCI, in an attempt to (i) define the physical domains associated with the multicomponent decay-associated spectra (DAS) and determine the origin of the kinetically sl...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi060243p

    authors: Engelmann E,Zucchelli G,Casazza AP,Brogioli D,Garlaschi FM,Jennings RC

    更新日期:2006-06-06 00:00:00

  • Direct interaction of the mouse cytomegalovirus m152/gp40 immunoevasin with RAE-1 isoforms.

    abstract::Cytomegaloviruses (CMVs) are ubiquitous species-specific viruses that establish acute, persistent, and latent infections. Both human and mouse CMVs encode proteins that inhibit the activation of natural killer (NK) cells by downregulating cellular ligands for the NK cell activating receptor, NKG2D. The MCMV glycoprote...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi902130j

    authors: Zhi L,Mans J,Paskow MJ,Brown PH,Schuck P,Jonjić S,Natarajan K,Margulies DH

    更新日期:2010-03-23 00:00:00

  • The complete amino acid sequence of a cardiotoxin from the venom of Naja naja (Cambodian Cobra).

    abstract::The complete amino acid sequence of a small, basic protein with cardiotoxic activity is described. This toxin, designated Naja naja F8, was isolated from the venom of Naja naja, of Cambodian origin, by gel filtration on Sephadex G-75 followed by gradient ion exchange chromatography on Bio-Rex 70. The cardiotoxin F8, m...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00684a011

    authors: Fryklund L,Eaker D

    更新日期:1975-07-01 00:00:00

  • Large-scale purification and characterization of a highly active four-subunit cytochrome bc1 complex from Rhodobacter sphaeroides.

    abstract::A highly active, large-scale preparation of ubiquinol:cytochrome c2 oxidoreductase (EC 1.10.2.2; cytochrome bc1 complex) has been obtained from Rhodobacter sphaeroides. The enzyme was solubilized from chromatophores by using dodecyl maltoside in the presence of glycerol and was purified by anion-exchange and gel filtr...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00463a004

    authors: Andrews KM,Crofts AR,Gennis RB

    更新日期:1990-03-20 00:00:00

  • Structure-based understanding of ligand affinity using human thrombin as a model system.

    abstract::Kinetic study of a series of compounds containing the thrombin-directed peptide D-Phe-ProboroArg-OH had indicated that the structure of the N-terminal blocking group may be correlated with binding [Kettner, C., Mersinger, L., & Knabb, R. (1990) J. Biol. Chem. 265, 18289-18297]. In order to further study this phenomeno...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi952164b

    authors: Nienaber VL,Mersinger LJ,Kettner CA

    更新日期:1996-07-30 00:00:00

  • Pulsed electron paramagnetic resonance studies of the lysine 2,3-aminomutase substrate radical: evidence for participation of pyridoxal 5'-phosphate in a radical rearrangement.

    abstract::The role of pyridoxal 5'-phosphate (PLP) in the radical-mediated amino group migration catalyzed by lysine 2,3-aminomutase from Clostridia SB4 has been investigated by electron spin echo envelope modulation (ESEEM) spectroscopy. This pulsed electron paramagnetic resonance (EPR) method was used to estimate the distance...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00031a033

    authors: Ballinger MD,Frey PA,Reed GH,LoBrutto R

    更新日期:1995-08-08 00:00:00

  • Mechanism of DNA-dependent protein kinase inhibition by cis-diamminedichloroplatinum(II)-damaged DNA.

    abstract::We have determined the mechanism of DNA-dependent protein kinase (DNA-PK) inhibition by cis-diamminedichloroplatinum(II)-(cisplatin-) damaged DNA. We previously have demonstrated that Ku, the DNA binding subunit of DNA-PK, is capable of binding to DNA duplexes globally damaged with cisplatin but was unable to stimulat...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi963124q

    authors: Turchi JJ,Patrick SM,Henkels KM

    更新日期:1997-06-17 00:00:00

  • Interparticle interactions and structural changes of nucleosome core particles in low-salt solution.

    abstract::The structural behavior of the nucleosome core particles in the range of solvent Na+ concentration from 10.45 to 0.45 mM has been studied by small-angle neutron and synchroton radiation X-ray scattering, sedimentation, atomic absorption spectroscopy, density measurements, and circular dichroism. With decreasing salt c...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00420a051

    authors: Hirai M,Niimura N,Zama M,Mita K,Ichimura S,Tokunaga F,Ishikawa Y

    更新日期:1988-10-04 00:00:00

  • Cross-linking of endothelin 1 and endothelin 3 to rat brain membranes: identification of the putative receptor(s).

    abstract::Affinity-labeling experiments with 125I-endothelin derivatives using bifunctional cross-linking reagents were carried out in an attempt to identify the polypeptide component(s) of the endothelin/sarafotoxin receptors in rat brain tissues. In rat cerebellum, cortex, and caudate putamen, endothelin 1 specifically labele...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00479a012

    authors: Ambar I,Kloog Y,Sokolovsky M

    更新日期:1990-07-10 00:00:00