Interaction of the antitumor compound cryptophycin-52 with tubulin.

Abstract:

:Cryptophycin-52 (LY355703) is currently undergoing clinical evaluation for cancer chemotherapy. It is a potent suppressor of microtubule dynamics in vitro, and low picomolar concentrations appear to inhibit cancer cell proliferation at mitosis by stabilizing spindle microtubules. In the present study, using [(3)H]cryptophycin-52, we found that the compound bound to tubulin at a single high-affinity site [apparent K(a) (3.6 +/- 1) x 10(6) L/mol, 34 degrees C]. The binding of cryptophycin-52 to tubulin was rapid, not appreciably temperature-dependent, and very poorly reversible. However, we could remove [(3)H]cryptophycin-52 from [(3)H]cryptophycin-52-tubulin complex by denaturing the complex with either urea treatment or boiling. These data suggest that the binding of cryptophycin-52 to tubulin is not covalent. A van't Hoff plot of the binding data indicated that the binding of cryptophycin-52 to tubulin is primarily entropy-driven with a minimum enthalpy contribution. In addition, cryptophycin-52 perturbed the far-ultraviolet circular dichroic spectrum of tubulin and it inhibited the colchicine-induced guanosine triphosphatase activity of tubulin, indicating that its binding to tubulin induces a conformational change in the tubulin. Competition experiments with vinblastine suggest that the binding site for crytophycin-52 may overlap with the vinblastine binding site.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Panda D,Ananthnarayan V,Larson G,Shih C,Jordan MA,Wilson L

doi

10.1021/bi0010827

subject

Has Abstract

pub_date

2000-11-21 00:00:00

pages

14121-7

issue

46

eissn

0006-2960

issn

1520-4995

pii

bi0010827

journal_volume

39

pub_type

杂志文章
  • Active site specific cadmium(II)-substituted horse liver alcohol dehydrogenase: crystal structures of the free enzyme, its binary complex with NADH, and the ternary complex with NADH and bound p-bromobenzyl alcohol.

    abstract::Three crystal structures have been determined of active site specific substituted Cd(II) horse liver alcohol dehydrogenase and its complexes. Intensities were collected for the free, orthorhombic enzyme to 2.4-A resolution and for a triclinic binary complex with NADH to 2.7-A resolution. A ternary complex was crystall...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00346a070

    authors: Schneider G,Cedergren-Zeppezauer E,Knight S,Eklund H,Zeppezauer M

    更新日期:1985-12-03 00:00:00

  • Nuclear Magnetic Resonance Solution Structure of DNA Featuring Clustered 2'-Deoxyribonolactone and 8-Oxoguanine Lesions.

    abstract::Ionizing radiation, free radicals, and reactive oxygen species produce hundreds of different DNA lesions. Clustered lesions are typical for ionizing radiation. They compromise the efficiency of the base excision repair (BER) pathway, and as a consequence, they are much more toxic and mutagenic than isolated lesions. D...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.6b00396

    authors: Zálešák J,Constant JF,Jourdan M

    更新日期:2016-07-19 00:00:00

  • Synthesis and biological evaluation in vitro of selective, high affinity peptide antagonists of human melanin-concentrating hormone action at human melanin-concentrating hormone receptor 1.

    abstract::Human melanin-concentrating hormone (hMCH) and many of its analogues are potent but nonspecific ligands for human melanin-concentrating hormone receptors 1 and 2 (hMCH-1R and hMCH-2R). To differentiate between the physiological functions of these receptors, selective antagonists are needed. In this study, analogues of...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0200514

    authors: Bednarek MA,Hreniuk DL,Tan C,Palyha OC,MacNeil DJ,Van der Ploeg LH,Howard AD,Feighner SD

    更新日期:2002-05-21 00:00:00

  • Evidence that catalysis by yeast inorganic pyrophosphatase proceeds by direct phosphoryl transfer to water and not via a phosphoryl enzyme intermediate.

    abstract::In this work, we show that adenosine 5'-O-(3-thiotriphosphate) (ATP gamma S) is a substrate for yeast inorganic pyrophosphatase (PPase) (EC 3.6.1.1) and further, using chirally labeled [gamma-17O,18O]ATP gamma S, that enzyme-catalyzed hydrolysis to produce chiral inorganic thio[17O,18O]phosphate proceeds with inversio...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00300a002

    authors: Gonzalez MA,Webb MR,Welsh KM,Cooperman BS

    更新日期:1984-02-28 00:00:00

  • Membrane-induced conformational change of alpha1-acid glycoprotein characterized by vacuum-ultraviolet circular dichroism spectroscopy.

    abstract::The tertiary structure of alpha1-acid glycoprotein (AGP) remains unresolved despite its novel function because AGP is a hard target in X-ray and NMR analyses. To elucidate the membrane-induced conformational change of AGP, the vacuum-ultraviolet circular dichroism (VUVCD) spectra of AGP and its constituent sugars were...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi901184r

    authors: Matsuo K,Namatame H,Taniguchi M,Gekko K

    更新日期:2009-09-29 00:00:00

  • Effects of temperature and viscosity on R67 dihydrofolate reductase catalysis.

    abstract::R67 dihydrofolate reductase (DHFR) is a novel homotetrameric protein that possesses 222 symmetry and a single, voluminous active site pore. This symmetry poses numerous limitations on catalysis; for example, two dihydrofolate (DHF) molecules or two NADPH molecules, or one substrate plus one cofactor can bind. Only the...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi052504l

    authors: Chopra S,Lynch R,Kim SH,Jackson M,Howell EE

    更新日期:2006-05-30 00:00:00

  • Equilibrium and stop-flow kinetic studies of fluorescently labeled DNA substrates with DNA repair proteins XPA and replication protein A.

    abstract::Nucleotide excision repair (NER) is a crucial pathway in the maintenance of genome stability requiring at least two dozen proteins. XPA and RPA have essential roles in the damage recognition step of NER. To better understand the mechanism of their interactions with DNA, we utilized equilibrium and stop-flow kinetic ap...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011041q

    authors: Iakoucheva LM,Walker RK,van Houten B,Ackerman EJ

    更新日期:2002-01-08 00:00:00

  • Recognition of Dictyostelium discoideum lysosomal enzymes is conferred by the amino-terminal carbohydrate binding site of the insulin-like growth factor II/mannose 6-phosphate receptor.

    abstract::The insulin-like growth factor-II/mannose 6-phosphate receptor (IGF-II/MPR) is a type I glycoprotein that mediates both the intracellular sorting of lysosomal enzymes bearing mannose 6-phosphate (Man-6-P) residues to the lysosome and the bioavailability of IGF-II. The extracytoplasmic region of the IGF-II/MPR contains...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi992226o

    authors: Marron-Terada PG,Hancock MK,Haskins DJ,Dahms NM

    更新日期:2000-03-07 00:00:00

  • The Streptomyces-produced antibiotic fosfomycin is a promiscuous substrate for archaeal isopentenyl phosphate kinase.

    abstract::Isopentenyl phosphate kinase (IPK) catalyzes the phosphorylation of isopentenyl phosphate to form the isoprenoid precursor isopentenyl diphosphate in the archaeal mevalonate pathway. This enzyme is highly homologous to fosfomycin kinase (FomA), an antibiotic resistance enzyme found in a few strains of Streptomyces and...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi201662k

    authors: Mabanglo MF,Serohijos AW,Poulter CD

    更新日期:2012-01-31 00:00:00

  • Photoaffinity labeling of the human receptor for urokinase-type plasminogen activator using a decapeptide antagonist. Evidence for a composite ligand-binding site and a short interdomain separation.

    abstract::Binding of urokinase-type plasminogen activator (uPA) to its cellular receptor (uPAR) renders the cell surface a favored site for plasminogen activation. Recently, a 15-mer peptide antagonist of the uPA-uPAR interaction, with an IC50 value of 10 nM, was identified using phage display technology [Goodson, R. J., Doyle,...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi972787k

    authors: Ploug M,Ostergaard S,Hansen LB,Holm A,Danø K

    更新日期:1998-03-17 00:00:00

  • Interactions of Acanthamoeba profilin with actin and nucleotides bound to actin.

    abstract::Three methods, fluorescence anisotropy of rhodamine-labeled profilin, intrinsic fluorescence and nucleotide exchange, give the same affinity, Kd = 0.1 microM, for Acanthamoeba profilins binding amoeba actin monomers with bound Mg-ATP. Replacement of serine 38 with cysteine created a unique site where labeling with rho...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi980093l

    authors: Vinson VK,De La Cruz EM,Higgs HN,Pollard TD

    更新日期:1998-08-04 00:00:00

  • Optical and magnetic resonance studies of formate binding to horse liver catalase and sperm whale myoglobin.

    abstract::The binding of formate ion, a substrate for the peroxidatic reaction of catalase, has been investigated by magnetic resonance techniques. Comparative studies of formate binding to ferric myoglobin have also been performed. The nuclear magnetic relaxation (NMR) rate of formate and water protons is enhanced by the prese...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00688a023

    authors: Hershberg RD,Chance B

    更新日期:1975-08-26 00:00:00

  • Isolation and characterization of human heparin.

    abstract::Heparin was isolated from an unusually large human hemangioma that contained an elevated level of mast cells. Purification of multimilligram quantities of heparin from this tissue sample permitted a thorough examination of its structure and activity. Characterization of this human heparin included the following: one-d...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00164a020

    authors: Linhardt RJ,Ampofo SA,Fareed J,Hoppensteadt D,Mulliken JB,Folkman J

    更新日期:1992-12-15 00:00:00

  • Parameters affecting the elongation block by RNA polymerase II at the SV40 attenuator 1 in vitro.

    abstract::We have previously suggested that folding of the SV40 attenuator RNA 1 into two hairpin elements leads to a block of transcription elongation. Using site-directed mutagenesis, we created three templates that either strengthened or weakened the proposed hairpin structures. The mutated and wild-type templates were clone...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00150a034

    authors: Goldring NB,Kessler M,Aloni Y

    更新日期:1992-09-08 00:00:00

  • Significant catalytic roles for Glu47 and Gln 110 in all four of the C-C bond-making and -breaking steps of the reactions of acetohydroxyacid synthase II.

    abstract::Acetohydroxy acid synthase (AHAS) is a thiamin diphosphate (ThDP)-dependent enzyme that catalyzes the first common step in the biosynthesis of branched-chain amino acids, condensation of pyruvate with a second 2-ketoacid to form either acetolactate or acetohydroxybutyrate. AHAS isozyme II from Escherichia coli is spec...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi102051h

    authors: Vyazmensky M,Steinmetz A,Meyer D,Golbik R,Barak Z,Tittmann K,Chipman DM

    更新日期:2011-04-19 00:00:00

  • Disulfide-linked bovine beta-lactoglobulin dimers fold slowly, navigating a glassy folding landscape.

    abstract::To gain insight into the folding of large proteins, we constructed a bovine beta-lactoglobulin (beta-lg) dimeric mutant, A34C/C121A beta-lg. In the mutant, a free thiol group of wild-type beta-lg at Cys121 was removed and two beta-lg molecules were linked by a disulfide bridge through Cys34 created at the dimer's inte...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi8001715

    authors: Yagi M,Kameda A,Sakurai K,Nishimura C,Goto Y

    更新日期:2008-06-03 00:00:00

  • Mitochondrial NADH-ubiquinone reductase: complementary DNA sequences of import precursors of the bovine and human 24-kDa subunit.

    abstract::The 24-kDa subunit of mitochondrial NADH-ubiquinone reductase (complex I) is an iron-sulfur protein that is present in the flavoprotein or NADH dehydrogenase II subcomplex. It is a nuclear gene product and is imported into the organelle. A group of human patients with mitochondrial myopathy have been shown to have red...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00434a021

    authors: Pilkington SJ,Walker JE

    更新日期:1989-04-18 00:00:00

  • hsp70 interacting protein Hip does not affect glucocorticoid receptor folding by the hsp90-based chaperone machinery except to oppose the effect of BAG-1.

    abstract::Reticulocyte lysate contains a chaperone system that assembles glucocorticoid receptor (GR).hsp90 heterocomplexes. Using purified proteins, we have prepared a five-protein heterocomplex assembly system consisting of two proteins essential for heterocomplex assembly-hsp90 and hsp70-and three proteins that act as co-cha...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi001671c

    authors: Kanelakis KC,Murphy PJ,Galigniana MD,Morishima Y,Takayama S,Reed JC,Toft DO,Pratt WB

    更新日期:2000-11-21 00:00:00

  • Fluorescence-detected circular dichroism of ethidium in vivo and bound to deoxyribonucleic acid in vitro.

    abstract::Fluorescence-detected circular dichroism (FDCD) spectra are reported for ethidium in Escherichia coli cells and bound to E. coli DNA in vitro. FDCD bands are observed at 325 and 385 nm. These bands change amplitude as the ethidium to DNA ratio changes. Spectra are similar for in vivo and in vitro measurements. However...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00333a001

    authors: Lamos ML,Turner DH

    更新日期:1985-06-04 00:00:00

  • Levuglandin forms adducts with histone h4 in a cyclooxygenase-2-dependent manner, altering its interaction with DNA.

    abstract::Inflammation and subsequent cyclooxygenase-2 (COX-2) activity has long been linked with the development of cancer, although little is known about any epigenetic effects of COX-2. A product of COX-2 activation, levuglandin (LG) quickly forms covalent bonds with nearby primary amines, such as those in lysine, which lead...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi401673b

    authors: Carrier EJ,Zagol-Ikapitte I,Amarnath V,Boutaud O,Oates JA

    更新日期:2014-04-22 00:00:00

  • Studies of the cryptic allylic pyrophosphate isomerase activity of trichodiene synthase using the anomalous substrate 6,7-dihydrofarnesyl pyrophosphate.

    abstract::Two enantiomeric analogues of farnesyl pyrophosphate (1) were tested as inhibitors and anomalous substrates of trichodiene synthase, which catalyzes the cyclization of trans,trans-farnesyl pyrophosphate (1) to the sesquiterpene hydrocarbon trichodiene (2). The reaction has been shown to involve preliminary isomerizati...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00475a011

    authors: Cane DE,Pawlak JL,Horak RM

    更新日期:1990-06-12 00:00:00

  • X-ray absorption study of Rhus laccase: evidence for a copper-copper interaction, which disappears on type 2 copper removal.

    abstract::X-ray absorption spectra are reported for the multi-Cu oxidase Rhus vernicifera laccase in oxidized and fully reduced forms and for laccase from which the type 2 Cu has been depleted (T2D). The structure of the Cu K edge for both preparations shows the presence of CuII and CuI in the oxidized and reduced states, respe...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00310a008

    authors: Woolery GL,Powers L,Peisach J,Spiro TG

    更新日期:1984-07-17 00:00:00

  • Lipid products of phosphoinositide 3-kinase bind human profilin with high affinity.

    abstract::To gain insight into the physiological function of phosphoinositide 3-kinase (PI 3-kinase) lipid products, this study examines the interactions of the D-3 phosphoinositides with profilin and the consequent effects on actin dynamics and phosphoinositide turnover. Profilin, a ubiquitous actin-regulating protein, plays a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi961878z

    authors: Lu PJ,Shieh WR,Rhee SG,Yin HL,Chen CS

    更新日期:1996-11-05 00:00:00

  • Solid-state NMR investigation of the dynamics of the soluble and membrane-bound colicin Ia channel-forming domain.

    abstract::Solid-state NMR spectroscopy was employed to study the molecular dynamics of the colicin Ia channel domain in the soluble and membrane-bound states. In the soluble state, the protein executes small-amplitude librations (with root-mean-square angular fluctuations of 0-10 degrees ) in the backbone and larger-amplitude m...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0027231

    authors: Huster D,Xiao L,Hong M

    更新日期:2001-06-26 00:00:00

  • Effects of the A.T/T.A degeneracy of pyrrole--imidazole polyamide recognition in the minor groove of DNA.

    abstract::Pairing rules have been developed to predict the sequence specificity of minor groove binding polyamides containing pyrrole (Py) and imidazole (Im) amino acids. An Im/Py pair distinguishes G.C from C.G and both of these from A.T/T.A base pairs. A Py/Py pair appears not to distinguish A.T from T.A base pairs. To test t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi960744i

    authors: White S,Baird EE,Dervan PB

    更新日期:1996-09-24 00:00:00

  • Alpha-conotoxin residues that interact at close range with gamma-tyrosine-111 and mutant delta-tyrosine-113 on the Torpedo nicotinic acetylcholine receptor.

    abstract::The alpha-conotoxins MI and GI display stronger affinities for the alphagamma agonist site on the Torpedo californica electrocyte nicotinic acetylcholine receptor (ACHR) than for the alphadelta agonist site, while alpha-conotoxin SI binds with the same affinity to both sites. Prior studies reported that the arginine a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi030248b

    authors: Vélez-Carrasco W,Valdés S,Agresar L,Lettich A,Guerra AY,Hann RM

    更新日期:2004-10-05 00:00:00

  • Electrostatic Constituents of the Interaction of Cardiolipin with Site A of Cytochrome c.

    abstract::Cytochrome c binds to cardiolipin (CL) on the inner mitochondrial membrane during the initial stages of apoptosis where it oxidizes CL, promoting its release into the cytoplasm where it initiates apoptosis. Previous work has identified interaction sites on cytochrome c involved in the cytochrome c-CL interaction. The ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.8b00704

    authors: Elmer-Dixon MM,Bowler BE

    更新日期:2018-10-02 00:00:00

  • Reshaping the Energy Landscape Transforms the Mechanism and Binding Kinetics of DNA Threading Intercalation.

    abstract::Molecules that bind DNA via threading intercalation show high binding affinity as well as slow dissociation kinetics, properties ideal for the development of anticancer drugs. To this end, it is critical to identify the specific molecular characteristics of threading intercalators that result in optimal DNA interactio...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b01036

    authors: Clark AG,Naufer MN,Westerlund F,Lincoln P,Rouzina I,Paramanathan T,Williams MC

    更新日期:2018-02-06 00:00:00

  • Interactions between heme d and heme b595 in quinol oxidase bd from Escherichia coli: a photoselection study using femtosecond spectroscopy.

    abstract::Femtosecond spectroscopy was performed on CO-liganded (fully reduced and mixed-valence states) and O(2)-liganded quinol oxidase bd from Escherichia coli. Substantial polarization effects, unprecedented for optical studies of heme proteins, were observed in the CO photodissociation spectra, implying interactions betwee...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0158019

    authors: Borisov VB,Liebl U,Rappaport F,Martin JL,Zhang J,Gennis RB,Konstantinov AA,Vos MH

    更新日期:2002-02-05 00:00:00

  • Identification of the neuronal acceptor in bovine cortex for ammodytoxin C, a presynaptically neurotoxic phospholipase A2.

    abstract::A specific, high-affinity binding site for ammodytoxin C in synaptic membranes from bovine cerebral cortex was detected and partially characterized. Equilibrium binding analysis revealed a single population of [125I]ammodytoxin C acceptors with the following binding parameters: Kd = 6.0 nM and Bmax = 5.7 pmol/mg membr...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00250a049

    authors: Krizaj I,Dolly JO,Gubensek F

    更新日期:1994-11-22 00:00:00