Mitochondrial NADH-ubiquinone reductase: complementary DNA sequences of import precursors of the bovine and human 24-kDa subunit.

Abstract:

:The 24-kDa subunit of mitochondrial NADH-ubiquinone reductase (complex I) is an iron-sulfur protein that is present in the flavoprotein or NADH dehydrogenase II subcomplex. It is a nuclear gene product and is imported into the organelle. A group of human patients with mitochondrial myopathy have been shown to have reduced levels of subunits of complex I in skeletal muscle mitochondria, and in one patient the 24-kDa subunit appears to be absent (Schapira et al., 1988). To investigate the genetic basis of this type of myopathy, cDNA clones have been isolated from a bovine library derived from heart and liver mRNA by hybridization with two mixtures of 48 synthetic oligonucleotides 17 bases in length that were designed on the basis of known protein sequences. The recombinant DNA sequence has been determined, and it encodes a precursor of the mature 24-kDa protein. The N terminus of the mature protein is preceded by a presequence of 32 amino acids that has properties that are characteristic of mitochondrial import sequences. The sequence of the mature protein deduced from the cDNA contains a segment of nine amino acids that was not determined in an earlier partial protein sequence analysis. The bovine clone has been employed as a hybridization probe to identify cDNA clones of the human homologue of the 24-kDa protein. Its DNA sequence has also been determined, and it codes for a protein that is closely related to the bovine protein.(ABSTRACT TRUNCATED AT 250 WORDS)

journal_name

Biochemistry

journal_title

Biochemistry

authors

Pilkington SJ,Walker JE

doi

10.1021/bi00434a021

subject

Has Abstract

pub_date

1989-04-18 00:00:00

pages

3257-64

issue

8

eissn

0006-2960

issn

1520-4995

journal_volume

28

pub_type

杂志文章
  • Strongly altered receptor binding properties in PP and NPY chimeras are accompanied by changes in structure and membrane binding.

    abstract::Neuropeptide Y (NPY) and the pancreatic polypeptide (PP) are members of the neuropeptide Y family of hormones. They bind to the Y receptors with very different affinities: Whereas PP is highly selective for the Y(4) receptor, NPY displays highest affinites for Y(1), Y(2), and Y(5) receptor subtypes. Introducing the NP...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0501232

    authors: Lerch M,Kamimori H,Folkers G,Aguilar MI,Beck-Sickinger AG,Zerbe O

    更新日期:2005-06-28 00:00:00

  • Protein S-glutathiolation triggered by decomposed S-nitrosoglutathione.

    abstract::Recombinant human brain calbindin D(28K) (rHCaBP), human Cu,Zn-superoxide dismutase (HCuZnSOD), rabbit muscle glyceraldehyde-3-phosphate dehydrogenase (GAPDH), and bovine serum albumin (BSA) were found to be S-glutathiolated in decomposed S-nitrosoglutathione (GSNO) solutions. Tryptic or Glu-C digestion and MALDI-TOF ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035924o

    authors: Tao L,English AM

    更新日期:2004-04-06 00:00:00

  • Reactivity of sulfenic acid in human serum albumin.

    abstract::Sulfenic acid is formed upon oxidation of thiols and is a central intermediate in the redox modulation of an increasing number of proteins. Methods for quantifying or even detecting sulfenic acid are scarce. Herein, the reagent 7-chloro-4-nitrobenz-2-oxa-1,3-diazole was determined not to be suitable as a chromophoric ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi701520y

    authors: Turell L,Botti H,Carballal S,Ferrer-Sueta G,Souza JM,Durán R,Freeman BA,Radi R,Alvarez B

    更新日期:2008-01-08 00:00:00

  • Effects of pH on the S(3) state of the oxygen evolving complex in photosystem II probed by EPR split signal induction.

    abstract::The electrons extracted from the CaMn(4) cluster during water oxidation in photosystem II are transferred to P(680)(+) via the redox-active tyrosine D1-Tyr161 (Y(Z)). Upon Y(Z) oxidation a proton moves in a hydrogen bond toward D1-His190 (His(Z)). The deprotonation and reprotonation mechanism of Y(Z)-OH/Y(Z)-O is of k...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi101364t

    authors: Sjöholm J,Havelius KG,Mamedov F,Styring S

    更新日期:2010-11-16 00:00:00

  • The colchicine-induced GTPase activity of tubulin: state of the product. Activation by microtubule-promoting cosolvents.

    abstract::Colchicine induces a weak assembly-independent GTPase activity in calf brain tubulin [David-Pfeuty, T., Erickson, H. P., & Pantaloni, D. (1977) Proc. Natl. Acad. Sci. U.S.A. 74, 5372-5376; Andreu, J. M., & Timasheff, S. N. (1981) Arch. Biochem. Biophys. 211, 151-157]. Kinetic analysis shows a turnover number of 2 x 10...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00186a027

    authors: Perez-Ramirez B,Shearwin KE,Timasheff SN

    更新日期:1994-05-24 00:00:00

  • Mechanism of enhanced superoxide production in the cytochrome b(6)f complex of oxygenic photosynthesis.

    abstract::The specific rate of superoxide (O2(•-)) production in the purified active crystallizable cytochrome b6f complex, normalized to the rate of electron transport, has been found to be more than an order of magnitude greater than that measured in isolated yeast respiratory bc1 complex. The biochemical and structural basis...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi4013534

    authors: Baniulis D,Hasan SS,Stofleth JT,Cramer WA

    更新日期:2013-12-17 00:00:00

  • Amino group environments and metal binding properties of carbon-13 reductively methylated bovine alpha-lactalbumin.

    abstract::13C NMR spectroscopy has been used to study the amino group environments and metal binding properties of 13C reductively methylated bovine alpha-lactalbumin. Bovine alpha-lactalbumin is a Ca2+ metalloprotein containing 12 lysyl amino groups and a free amino terminus. All 13 amino groups can be 13C-dimethylated without...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00315a026

    authors: Gerken TA

    更新日期:1984-09-25 00:00:00

  • Combined N- and C-terminal truncation of human apolipoprotein A-I yields a folded, functional central domain.

    abstract::A combined N- and C-terminal truncation variant of human apolipoprotein A-I (apoA-I) was designed, expressed in Escherichia coli, isolated, and characterized. Hydrodynamic experiments yielded a weight average molecular weight of 34000, indicating apoA-I-(44-186) exists in solution predominantly as a dimer. An axial ra...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0477135

    authors: Beckstead JA,Block BL,Bielicki JK,Kay CM,Oda MN,Ryan RO

    更新日期:2005-03-22 00:00:00

  • Characterization of Acyl Carrier Protein-Dependent Glycosyltransferase in Mitomycin C Biosynthesis.

    abstract::Mitomycins make up a group of antitumor natural products that are biosynthesized from aminohydroxybenzoic acid (AHBA) and N-acetylglucosamine (GlcNAc). While the biosynthetic gene cluster was reported two decades ago, the mechanism by which the two building blocks, AHBA and GlcNAc, are coupled during biosynthesis rema...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.9b00379

    authors: Nguyen HP,Yokoyama K

    更新日期:2019-06-25 00:00:00

  • Inactivation of factor VIII by factor IXa.

    abstract::Factor VIII (FVIII) is the nonproteolytic cofactor for FIXa in the tenase complex of blood coagulation. FVIII is proteolytically activated by thrombin and FXa in vitro to form a heterotrimer with full procoagulant activity. Activated protein C inactivates thrombin-activated FVIII through cleavage adjacent to position ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00125a022

    authors: O'Brien DP,Johnson D,Byfield P,Tuddenham EG

    更新日期:1992-03-17 00:00:00

  • A study of protein-sodium dodecyl sulfate complexes by transient electric birefringence.

    abstract::The method of transient electric birefringence has been applied to study the conformation of protein-sodium dodecyl sulfate complexes. A model of a deformable prolate ellipsoid has been proposed for the protein-dodecyl sulfate complex. This model is compared to the models proposed by J. A. Reynolds and C. Tanford (197...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00685a030

    authors: Wright AK,Thompson MR,Miller RL

    更新日期:1975-07-15 00:00:00

  • tRNA 3' processing in plants: nuclear and mitochondrial activities differ.

    abstract::The nuclear tRNA 3' processing activity from wheat has been characterized and partially purified. Several characteristics of the wheat nuclear 3' processing enzyme now allow this activity to be distinguished from its mitochondrial counterpart. The nuclear enzyme is an endonuclease, which we termed nuclear RNase Z. The...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi992253e

    authors: Mayer M,Schiffer S,Marchfelder A

    更新日期:2000-02-29 00:00:00

  • Regeneration of bovine and octopus opsins in situ with natural and artificial retinals.

    abstract::We consider the problem of color regulation in visual pigments for both bovine rhodopsin (lambda max = 500 nm) and octopus rhodopsin (lambda max = 475 nm). Both pigments have 11-cis-retinal (lambda max = 379 nm, in ethanol) as their chromophore. These rhodopsins were bleached in their native membranes, and the opsins ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00432a055

    authors: Koutalos Y,Ebrey TG,Tsuda M,Odashima K,Lien T,Park MH,Shimizu N,Derguini F,Nakanishi K,Gilson HR

    更新日期:1989-03-21 00:00:00

  • D18G transthyretin is monomeric, aggregation prone, and not detectable in plasma and cerebrospinal fluid: a prescription for central nervous system amyloidosis?

    abstract::Over 70 transthyretin (TTR) mutations facilitate amyloidosis in tissues other than the central nervous system (CNS). In contrast, the D18G TTR mutation in individuals of Hungarian descent leads to CNS amyloidosis. D18G forms inclusion bodies in Escherichia coli, unlike the other disease-associated TTR variants overexp...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi027319b

    authors: Hammarström P,Sekijima Y,White JT,Wiseman RL,Lim A,Costello CE,Altland K,Garzuly F,Budka H,Kelly JW

    更新日期:2003-06-10 00:00:00

  • Peptide models of protein folding initiation sites. 2. The G-H turn region of myoglobin acts as a helix stop signal.

    abstract::A series of peptide fragments of sperm whale myoglobin, corresponding to segments of the region between the G- and H-helices of the protein, have been synthesized and their conformational preferences investigated using circular dichroism and nuclear magnetic resonance spectroscopy in aqueous solution and in solvent mi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00076a007

    authors: Shin HC,Merutka G,Waltho JP,Wright PE,Dyson HJ

    更新日期:1993-06-29 00:00:00

  • Stimulation of iron(II) bleomycin activity by phosphate-containing compounds.

    abstract::Orthophosphate and phosphate derivatives including pyrophosphate, hexametaphosphate, ATP, ADP, and inositol hexaphosphate enhance the extent of DNA degradation by iron(II) bleomycin. These phosphate-containing compounds increase both the release of free nucleic base and that of base propenals which are DNA cleavage pr...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00335a034

    authors: Burger RM,Horwitz SB,Peisach J

    更新日期:1985-07-02 00:00:00

  • The Protein-tyrosine-phosphatase SHP2 is phosphorylated on serine residues 576 and 591 by protein kinase C isoforms alpha, beta 1, beta 2, and eta.

    abstract::To study whether protein kinase C (PKC) isoforms can interact with protein-tyrosine-phosphatases (PTPs) which are connected to the insulin signaling pathway, we co-overexpressed PKC isoforms together with insulin receptor, docking proteins, and the PTPs SHP1 and SHP2 in human embryonic kidney (HEK) 293 cells. After ph...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011327v

    authors: Strack V,Krützfeldt J,Kellerer M,Ullrich A,Lammers R,Häring HU

    更新日期:2002-01-15 00:00:00

  • Human secreted carbonic anhydrase: cDNA cloning, nucleotide sequence, and hybridization histochemistry.

    abstract::Complementary DNA clones coding for the human secreted carbonic anhydrase isozyme (CA VI) have been isolated and their nucleotide sequences determined. These clones identify a 1.45-kb mRNA that is present in high levels in parotid submandibular salivary glands but absent in other tissues such as the sublingual gland, ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00216a035

    authors: Aldred P,Fu P,Barrett G,Penschow JD,Wright RD,Coghlan JP,Fernley RT

    更新日期:1991-01-15 00:00:00

  • Modified nucleosides in the first positions of the anticodons of tRNA(Leu)4 and tRNA(Leu)5 from Escherichia coli.

    abstract::Minor leucine tRNA species, tRNA(Leu)4 and tRNA(Leu)5, from Escherichia coli B have been reported to recognize leucine codons UUA and UUG [Goldman, E., Holmes, W. M., and Hatfield, G. W. (1979) J. Mol. Biol. 129, 567-585]. In the present study, these two tRNA(Leu) species were purified from E. coli A19, and the nucleo...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi981865g

    authors: Horie N,Yamaizumi Z,Kuchino Y,Takai K,Goldman E,Miyazawa T,Nishimura S,Yokoyama S

    更新日期:1999-01-05 00:00:00

  • Peptidomics of prolyl endopeptidase in the central nervous system.

    abstract::Prolyl endopeptidase (Prep) is a member of the prolyl peptidase family and is of interest because of its unique biochemistry and connections to cognitive function. Using an unbiased mass spectrometry (MS)-based peptidomics platform, we identified Prep-regulated peptides in the central nervous system (CNS) of mice by m...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi901637c

    authors: Nolte WM,Tagore DM,Lane WS,Saghatelian A

    更新日期:2009-12-22 00:00:00

  • X-ray Structures of the Proprotein Convertase Furin Bound with Substrate Analogue Inhibitors Reveal Substrate Specificity Determinants beyond the S4 Pocket.

    abstract::The proprotein convertase furin is a highly specific serine protease modifying and thereby activating proteins in the secretory pathway by proteolytic cleavage. Its substrates are involved in many diseases, including cancer and infections caused by bacteria and viruses. Understanding furin's substrate specificity is c...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b01124

    authors: Dahms SO,Hardes K,Steinmetzer T,Than ME

    更新日期:2018-02-13 00:00:00

  • Estimating the degree of expansion in the transition state for protein unfolding: analysis of the pH dependence of the rate constant for caricain denaturation.

    abstract::The thermal denaturation of caricain (the most alkaline of papain-related proteinases) was studied in acid media. Under all conditions tested, caricain denatured irreversibly following a single first-order reaction that involves simultaneous loss of secondary and tertiary structures. Besides, variation of the rate con...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi991658w

    authors: López-Arenas L,Solís-Mendiola S,Hernández-Arana A

    更新日期:1999-11-30 00:00:00

  • Affinity selection of chemically modified proteins: role of lysyl residues in the binding of calmodulin to calcineurin.

    abstract::In affinity selection, calcineurin selects from a population of randomly modified calmodulins those species with which it prefers to interact. The method shows that acetylation of lysines affects calmodulin so as to interfere with its ability to interact with calcineurin. Monoacetylation of any lysine of calmodulin re...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00379a026

    authors: Manalan AS,Klee CB

    更新日期:1987-03-10 00:00:00

  • Conformational changes and substrate recognition in Pseudomonas aeruginosa D-arginine dehydrogenase.

    abstract::DADH catalyzes the flavin-dependent oxidative deamination of d-amino acids to the corresponding α-keto acids and ammonia. Here we report the first X-ray crystal structures of DADH at 1.06 Å resolution and its complexes with iminoarginine (DADH(red)/iminoarginine) and iminohistidine (DADH(red)/iminohistidine) at 1.30 Å...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi1005865

    authors: Fu G,Yuan H,Li C,Lu CD,Gadda G,Weber IT

    更新日期:2010-10-05 00:00:00

  • Inhibition of rabbit globin mRNA translation by sequence-specific oligodeoxyribonucleotides.

    abstract::Oligodeoxyribonucleotides 8-12 nucleotides in length whose sequences are complementary to the 5' end, the initiation codon regions, or the coding regions of rabbit globin mRNA were tested for their ability to inhibit translation in a rabbit reticulocyte lysate and in a wheat germ extract. The oligomers interact specif...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00343a015

    authors: Blake KR,Murakami A,Miller PS

    更新日期:1985-10-22 00:00:00

  • Mutation and evolution of the magnesium-binding site of a class II aminoacyl-tRNA synthetase.

    abstract::Aminoacyl-tRNA synthetases contain one or three Mg(2+) ions in their catalytic sites. In addition to their role in ATP binding, these ions are presumed to play a role in catalysis by increasing the electropositivity of the alpha-phosphate and stabilizing the pentavalent transition state. In the class II aaRS, two high...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi049617+

    authors: Ador L,Jaeger S,Geslain R,Martin F,Cavarelli J,Eriani G

    更新日期:2004-06-08 00:00:00

  • Physiological inhibitors of the catalytic subunit of cAMP-dependent protein kinase: effect of MgATP on protein-protein interactions.

    abstract::The catalytic (C) subunit of cAMP-dependent protein kinase interacts with two classes of inhibitors. The regulatory (R) subunits, types I and II, associate to form an inactive holoenzyme complex that is activated in response to cAMP. The C-subunit is also inhibited by small heat-stable protein kinase inhibitors (PKI's...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00213a035

    authors: Herberg FW,Taylor SS

    更新日期:1993-12-21 00:00:00

  • Photoinactivation and photoaffinity labeling of tryptophan synthase alpha 2 beta 2 complex by the product analogue 6-azido-L-tryptophan.

    abstract::The photoaffinity reagent 6-azido-L-tryptophan was synthesized by chemical methods. It binds reversibly in the dark to the alpha 2 beta 2 complex of tryptophan synthase of Escherichia coli and forms a quinonoid intermediate with enzyme-bound pyridoxal phosphate (lambda max = 476 nm). The absorbance of this chromophore...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00338a031

    authors: Miles EW,Phillips RS

    更新日期:1985-08-13 00:00:00

  • An unusual pattern of CytR and CRP binding energetics at Escherichia coli cddP suggests a unique blend of class I and class II mediated activation.

    abstract::Two transcription factors, CRP and CytR, mediate positive and negative control of nine cistrons involved in nucleoside catabolism and recycling in Escherichia coli. The ability of multiple transcription factors to combine in different ways to confer differential gene regulation is of significant interest in both proka...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi901583n

    authors: Holt AK,Senear DF

    更新日期:2010-01-26 00:00:00

  • Characterization of the collagens synthesized by Chinese hamster ovary cells. Effect of colcemid and dibutyryladenosine cyclic monophosphate.

    abstract::The collagens synthesized by Chinese hamster ovary cells have been isolated and characterized. Although these cells produce very small amounts of collagen, at least five distinct collagenous chains could be identified from radiolabeled media and cell extracts after limited pepsin digestion. Two chains were characteriz...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00262a031

    authors: Limeback H,Sodek J,Aubin J

    更新日期:1982-09-14 00:00:00