Differentially expressed transcripts in adipose tissue between Korean native pig and Yorkshire breeds.


:We measured and compared the transcripts of adipose tissue from Korean native pig (KNP) and Yorkshire (YS) breeds to investigate breed-specific transcription changes. We employed both the Affymetrix porcine genome array and quantitative reverse transcription-polymerase chain reaction (qRT-PCR). We found eight genes showing significant changes between the two breeds. Based on a literature review, these genes were indicative of differences in extracellular structure density and differences in the potential to metabolize xenobiotic chemicals and lipids. The differentially expressed genes indicated that KNP has a lower extracellular structure density and a lower potential to metabolize xenobiotic chemicals than YS.


Anim Genet


Animal genetics


Moon JK,Kim KS,Kim JJ,Choi BH,Cho BW,Kim TH,Lee CK




Has Abstract


2009-02-01 00:00:00














  • Heritability of racing performance in the Australian Thoroughbred racing population.

    abstract::Performance data for 164,046 Thoroughbreds entered in a race or official barrier trial in Australia were provided by Racing Information Services Australia. Analyses estimating the heritability for a range of racing performance traits using a single-trait animal model were performed using ASREML-R. Log of cumulative ea...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Velie BD,Hamilton NA,Wade CM

    更新日期:2015-02-01 00:00:00

  • An integrated comparative map of the porcine X chromosome.

    abstract::The objectives of this study were to assign both microsatellite and gene-based markers on porcine chromosome X to two radiation hybrid (RH) panels and to develop a more extensive integrated map of SSC-X. Thirty-five microsatellite and 20 gene-based markers were assigned to T43RH, and 16 previously unreported microsate...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: McCoard SA,Fahrenkrug SC,Alexander LJ,Freking BA,Rohrer GA,Wise TH,Ford JJ

    更新日期:2002-06-01 00:00:00

  • Inbreeding and purging at the genomic Level: the Chillingham cattle reveal extensive, non-random SNP heterozygosity.

    abstract::Local breeds of livestock are of conservation significance as components of global biodiversity and as reservoirs of genetic variation relevant to the future sustainability of agriculture. One such rare historic breed, the Chillingham cattle of northern England, has a 350-year history of isolation and inbreeding yet s...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Williams JL,Hall SJ,Del Corvo M,Ballingall KT,Colli L,Ajmone Marsan P,Biscarini F

    更新日期:2016-02-01 00:00:00

  • Mapping of quantitative trait loci for clinical-chemical traits in swine.

    abstract::Clinical-chemical traits are diagnostic parameters essential for characterization of health and disease in veterinary practice. The traits show significant variability and are under genetic control, but little is known about the fundamental genetic architecture of this variability, especially in swine. We have identif...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Reiner G,Clemens N,Fischer R,Köhler F,Berge T,Hepp S,Willems H

    更新日期:2009-02-01 00:00:00

  • Variant discovery in a QTL region on chromosome 3 associated with fatness in chickens.

    abstract::Abdominal fat content is an economically important trait in commercially bred chickens. Although many quantitative trait loci (QTL) related to fat deposition have been detected, the resolution for these regions is low and functional variants are still unknown. The current study was conducted aiming at increasing resol...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Moreira GC,Godoy TF,Boschiero C,Gheyas A,Gasparin G,Andrade SC,Paduan M,Montenegro H,Burt DW,Ledur MC,Coutinho LL

    更新日期:2015-04-01 00:00:00

  • Expression levels of 25 genes in liver and testis located in a QTL region for androstenone on SSC7q1.2.

    abstract::A quantitative trait locus (QTL) for boar fat androstenone levels has been identified near the SSC7 centromere in a Large White × Meishan cross. Backcrosses were produced to isolate the Chinese haplotype in a European genetic background. The expression of 25 genes from the QTL region was studied in the testes and live...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Robic A,Fève K,Larzul C,Billon Y,van Son M,Liaubet L,Sarry J,Milan D,Grindflek E,Bidanel JP,Riquet J

    更新日期:2011-12-01 00:00:00

  • Tracing genetic differentiation of Chinese Mongolian sheep using microsatellites.

    abstract::The genetic consequences of population differentiation and isolation have been the subject of conservation biology. In this study, we analysed the genetic diversity and structure of Mongolian sheep in China. These animals belong to a traditional local breed with high production, extensive adaption, early maturity and ...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Zhong T,Han JL,Guo J,Zhao QJ,Fu BL,Pu YB,He XH,Jeon JT,Guan WJ,Ma YH

    更新日期:2011-10-01 00:00:00

  • A linkage map of common carp (Cyprinus carpio) based on AFLP and microsatellite markers.

    abstract::Common carp (Cyprinus carpio) is an important fish for aquaculture, but genomics of this species is still in its infancy. In this study, a linkage map of common carp based on Amplified Fragment Length Polymorphism (AFLP) and microsatellite (SSR) markers has been generated using gynogenetic haploids. Of 926 markers gen...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Cheng L,Liu L,Yu X,Wang D,Tong J

    更新日期:2010-04-01 00:00:00

  • Genetic dissection of bull fertility in US Jersey dairy cattle.

    abstract::The service sire has been recognized as an important factor affecting herd fertility in dairy cattle. Recent studies suggest that genetic factors explain part of the difference in fertility among Holstein sires. The main objective of this study was to dissect the genetic architecture of sire fertility in US Jersey cat...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Rezende FM,Dietsch GO,Peñagaricano F

    更新日期:2018-10-01 00:00:00

  • Identification and SNP association analysis of a novel gene in chicken.

    abstract::A novel gene that was predicted to encode a long noncoding RNA (lncRNA) transcript was identified in a previous study that aimed to detect candidate genes related to growth rate differences between Chinese local breed Gushi chickens and Anka broilers. To characterise the biological function of the lncRNA, we cloned an...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Mei X,Kang X,Liu X,Jia L,Li H,Li Z,Jiang R

    更新日期:2016-02-01 00:00:00

  • Detecting signatures of selection in nine distinct lines of broiler chickens.

    abstract::Modern commercial chickens have been bred for one of two specific purposes: meat production (broilers) or egg production (layers). This has led to large phenotypic changes, so that the genomic signatures of selection may be detectable using statistical techniques. Genetic differentiation between nine distinct broiler ...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Stainton JJ,Haley CS,Charlesworth B,Kranis A,Watson K,Wiener P

    更新日期:2015-02-01 00:00:00

  • A single nucleotide polymorphism in suppressor of cytokine signalling-2 is associated with growth and feed conversion efficiency in pigs.

    abstract::Feed efficiency and growth are the most important traits in pig production, and very few genetic markers have been reported to be associated with feed efficiency. The suppressor of cytokine signalling-2 (encoded by SOCS2) is the main negative regulator of somatic growth, and the knockout of SOCS2 and naturally mutant ...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Chen Y,Piper E,Zhang Y,Tier B,Graser HU,Luxford BG,Moran C

    更新日期:2011-04-01 00:00:00

  • Compound heterozygosity for TNXB genetic variants in a mixed-breed dog with Ehlers-Danlos syndrome.

    abstract::The Ehlers-Danlos syndromes (EDSs) are a heterogeneous group of inherited connective tissue disorders characterized by skin hyperextensibility, joint hypermobility and tissue fragility. Inherited disorders similar to human EDS have been reported in different mammalian species. In the present study, we investigated a f...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Bauer A,de Lucia M,Leuthard F,Jagannathan V,Leeb T

    更新日期:2019-10-01 00:00:00

  • Differential expression of the GTL2 gene within the callipyge region of ovine chromosome 18.

    abstract::The inheritance pattern of the skeletal muscle hypertrophy phenotype caused by the callipyge gene has been characterized as polar overdominance. We hypothesized that this trait may be caused by a gain or loss of gene expression because of the reversible nature of the phenotype in paternal vs. maternal inheritance. Sup...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Bidwell CA,Shay TL,Georges M,Beever JE,Berghmans S,Cockett NE

    更新日期:2001-10-01 00:00:00

  • Next generation semiconductor based sequencing of bitter taste receptor genes in different pig populations and association analysis using a selective DNA pool-seq approach.

    abstract::Taste perception in animals affects feed intake and may influence production traits. In particular, bitter is sensed by receptors encoded by the family of TAS2R genes. In this research, using a DNA pool-seq approach coupled with next generation semiconductor based target resequencing, we analysed nine porcine TAS2R ge...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Ribani A,Bertolini F,Schiavo G,Scotti E,Utzeri VJ,Dall'Olio S,Trevisi P,Bosi P,Fontanesi L

    更新日期:2017-02-01 00:00:00

  • A first-generation microsatellite linkage map of the Japanese quail.

    abstract::A linkage map of the Japanese quail (Coturnix japonica) genome was constructed based upon segregation analysis of 72 microsatellite loci in 433 F(2) progeny of 10 half-sib families obtained from a cross between two quail lines of different genetic origins. One line was selected for long duration of tonic immobility, a...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Kayang BB,Vignal A,Inoue-Murayama M,Miwa M,Monvoisin JL,Ito S,Minvielle F

    更新日期:2004-06-01 00:00:00

  • Identifying genetic loci controlling neonatal passive transfer of immunity using a hybrid genotyping strategy.

    abstract::Colostrum intake is critical to a piglet's survival and can be measured by precipitating out the γ-immunoglobulins from serum with ammonium sulfate (immunocrit). Genetic analysis of immunocrits on 5312 piglets indicated that the heritabilities (se) for direct and maternal effects were 0.13 (0.06) and 0.53 (0.08) respe...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Rohrer GA,Rempel LA,Miles JR,Keele JW,Wiedmann RT,Vallet JL

    更新日期:2014-06-01 00:00:00

  • The influence of extracellular matrix and prolactin on global gene expression profiles of primary bovine mammary epithelial cells in vitro.

    abstract::An in vitro bovine mammosphere model was characterized for use in lactational biology studies using a functional genomics approach. Primary bovine mammary epithelial cells cultured on a basement membrane, Matrigel, formed three-dimensional alveoli-like structures or mammospheres. Gene expression profiling during mammo...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Riley LG,Gardiner-Garden M,Thomson PC,Wynn PC,Williamson P,Raadsma HW,Sheehy PA

    更新日期:2010-02-01 00:00:00

  • Characterization of the porcine acyl-CoA synthetase long-chain 4 gene and its association with growth and meat quality traits.

    abstract::Summary Long-chain acyl-CoA synthetase (ACSL) catalyses the formation of long-chain acyl-CoA from fatty acid, ATP and CoA, activating fatty acids for subsequent reactions. Long-chain acyl-CoA synthetase thus plays an essential role in both lipid biosynthesis and fatty acid degradation. The ACSL4 gene was evaluated as ...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Mercadé A,Estellé J,Pérez-Enciso M,Varona L,Silió L,Noguera JL,Sánchez A,Folch JM

    更新日期:2006-06-01 00:00:00

  • Genetic polymorphism of the sixth component of complement (C6) in dogs.

    abstract::Using agarose gel isoelectric focusing and immunoblotting with rabbit anti-rabbit C6, a genetic polymorphism was found in the sixth component of complement (C6) in 18 Asian native breeds or populations and three European breeds of dog. The C6 locus was highly polymorphic. The phenotype distribution data indicated that...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Shibata T,Abe T,Tanabe Y

    更新日期:1995-04-01 00:00:00

  • Extending the chicken-human comparative map by placing 15 genes on the chicken linkage map.

    abstract::To increase the number of type I loci on the chicken linkage map, chicken genes containing microsatellite sequences (TAn, CAn, GAn, An) were selected from the nucleotide sequence database and primers were developed to amplify the repeats. Initially, 40 different microsatellites located within genes were tested on a pa...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Groenen MA,Crooijmans RP,Dijkhof RJ,Acar R,van der Poel JJ

    更新日期:1999-12-01 00:00:00

  • Genetic characterization of biodiversity in highly inbred chicken lines by microsatellite markers.

    abstract::Forty-two microsatellite loci were analysed in 23 highly inbred chicken lines derived from Leghorn, Jungle Fowl, Fayoumi and Spanish breeds. Line-specific alleles among breeds and lines were detected. The band-sharing (BS) values were calculated and the proportion of shared alleles distances (Dps) were estimated. The ...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Zhou H,Lamont SJ

    更新日期:1999-08-01 00:00:00

  • Genetic variation in the blood of llamas, Llama glama, and alpacas, Llama pacos.

    abstract::Blood samples of llamas and alpacas were typed using haemolytic, electrophoretic and isoelectric focusing procedures to assay polymorphism at 13 loci. Blood group variation was assessed using six antibody specificities produced by allo- and heteroimmunizations. Two red cell factors (A and B) behave as autosomal, codom...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Penedo MC,Fowler ME,Bowling AT,Anderson DL,Gordon L

    更新日期:1988-01-01 00:00:00

  • A candidate-SNP retrospective cohort study for fracture risk in Japanese Thoroughbred racehorses.

    abstract::Fractures are medical conditions that compromise the athletic potential of horses and/or the safety of jockeys. Therefore, the reduction of fracture risk is an important horse and human welfare issue. The present study used molecular genetic approaches to determine the effect of genetic risk for fracture at four candi...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Tozaki T,Kusano K,Ishikawa Y,Kushiro A,Nomura M,Kikuchi M,Kakoi H,Hirota K,Miyake T,Hill EW,Nagata S

    更新日期:2020-02-01 00:00:00

  • Intrageneric amplification of horse microsatellite markers with emphasis on the Przewalski's horse (E. przewalskii).

    abstract::Primer sequences flanking 13 microsatellite loci isolated from the domestic horse (E. caballus) were successfully used to amplify homologous loci in the Przewalski's horse (E. przewalskii). The results demonstrate that the level of polymorphism at all 13 loci in the Przewalski's horse was comparable to that in the dom...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Breen M,Downs P,Irvin Z,Bell K

    更新日期:1994-12-01 00:00:00

  • A genome-wide association study reveals a QTL influencing caudal supernumerary teats in Holstein cattle.

    abstract::Supernumerary teats represent a common abnormality of the bovine udder. A genome-wide association study was performed based on the proportion of the occurrence of supernumerary teats in the daughters of 1097 Holstein bulls. The heritability of caudal supernumerary teats without mammary gland in this study was 0.604. T...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Joerg H,Meili C,Ruprecht O,Bangerter E,Burren A,Bigler A

    更新日期:2014-12-01 00:00:00

  • Current knowledge of microRNA characterization in agricultural animals.

    abstract::MicroRNA (miRNA) is a class of single-stranded small (19-24nt) regulatory RNA that silences gene expression post-transcriptionally. miRNAs regulate a wide range of biological processes through the recognition of complementary sequences between miRNAs and their target genes. Profiling studies in livestock have revealed...

    journal_title:Animal genetics

    pub_type: 杂志文章,评审


    authors: Liu HC,Hicks JA,Trakooljul N,Zhao SH

    更新日期:2010-06-01 00:00:00

  • Runs of homozygosity: current knowledge and applications in livestock.

    abstract::This review presents a broader approach to the implementation and study of runs of homozygosity (ROH) in animal populations, focusing on identifying and characterizing ROH and their practical implications. ROH are continuous homozygous segments that are common in individuals and populations. The ability of these homoz...

    journal_title:Animal genetics

    pub_type: 杂志文章,评审


    authors: Peripolli E,Munari DP,Silva MVGB,Lima ALF,Irgang R,Baldi F

    更新日期:2017-06-01 00:00:00

  • A high-resolution radiation hybrid map of porcine chromosome 6.

    abstract::A high-resolution comprehensive map was constructed for porcine chromosome (SSC) 6, where quantitative trait loci (QTL) for reproduction and meat quality traits have been reported to exist. A radiation hybrid (RH) map containing 105 gene-based markers and 15 microsatellite markers was constructed for this chromosome u...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Cao H,Robinson JA,Jiang Z,Melville JS,Golovan SP,Jones MW,Verrinder Gibbins AM

    更新日期:2004-10-01 00:00:00

  • Caecal transcriptome analysis of colonized and non-colonized chickens within two genetic lines that differ in caecal colonization by Campylobacter jejuni.

    abstract::Campylobacter jejuni is one of the most common causes of human bacterial enteritis worldwide. The molecular mechanisms of the host responses of chickens to C. jejuni colonization are not well understood. We have previously found differences in C. jejuni colonization at 7-days post-inoculation (pi) between two genetic ...

    journal_title:Animal genetics

    pub_type: 杂志文章


    authors: Li XY,Swaggerty CL,Kogut MH,Chiang HI,Wang Y,Genovese KJ,He H,Pevzner IY,Zhou HJ

    更新日期:2011-10-01 00:00:00