Abstract：
:Uridine diphosphate (UDP)-glycosyltransferases (UGTs) involved in many metabolic processes are ubiquitous in plants, animals, microorganisms and other organisms and are essential for their growth and development. Upland cotton contains a large number of UGT genes. In this study, we aimed to identify UGT family members in the genome of upland cotton (Gossypium hirsutum L.) and analyze their expression patterns. Bioinformatics methods were used to identify UGT genes from the whole genome of upland cotton (Gossypium hirsutum L. acc. TM-1). Phylogenetic analysis was conducted based on alignment of UGT proteins from upland cotton, and the gene structure, motif and chromosome localization were analyzed for the H subgroup of the UGT family. And the physical and chemical properties and expressions of the genes in the H subgroup of this family were also analyzed. A total of 274 UGT genes were identified from the whole genome of upland cotton and were divided into nine subgroups based on phylogenetic analyses. In subgroup H, 36 genes were distributed on 18 chromosomes. The subfamily genes were simple in the structure, 19 of its members contained two introns, and the others contained only one intron. The qRT-PCR results and transcriptomic data indicated that most of the genes had a wide range of tissue expression characteristics. And the phylogenetic analysis results and expression profiles of these genes revealed tissues and different UGT genes from this crop. Taking RNA-seq, RT-qPCR, and quantitative trait locus (QTL) mapping together, our results suggested that GhUGT6 and GhUGT105 in subgroup H of the GhUGT gene family could be potential candidate genes for cotton yield, and GhUGT16, GhUGT103 might play a vital role in fiber development.
journal_name
3 Biotechjournal_title
3 Biotechauthors
Xiao X,Lu Q,Liu R,Gong J,Gong W,Liu A,Ge Q,Li J,Shang H,Li P,Deng X,Li S,Zhang Q,Niu D,Chen Q,Shi Y,Zhang H,Yuan Ydoi
10.1007/s13205-019-1984-1subject
Has Abstractpub_date
2019-12-01 00:00:00pages
453issue
12eissn
2190-572Xissn
2190-5738pii
1984journal_volume
9pub_type
杂志文章相关文献
3 Biotech文献大全abstract：:This investigation demonstrates an efficient method of propagation, short-term conservation, and germplasm exchange for Plectranthus amboinicus (Lour.) Spreng. encapsulated propagules. In vitro-derived shoot apices (shoot tips and nodal segments) which showed 100% survival on MS medium supplemented with 0.4 mg/L 6-ben...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-019-1831-4
更新日期：2019-08-01 00:00:00
abstract：:Parasporal crystalline inclusion proteins of some Bacillus spp. are of paramount importance due to their insecticidal, nematocidal, and cancer cell killing capabilities. Here, we present a brief report of the complete genome sequence of Bacillus sp. BD59S, a bacterium that produced HeLa cell-killing parasporal crystal...
journal_title：3 Biotech
pub_type：
doi：10.1007/s13205-019-1849-7
更新日期：2019-09-01 00:00:00
abstract：:Selection of the raw material and its efficient utilization are the critical factors in economization of second generation (2G) ethanol production. Fermentation of the released sugars into ethanol by a suitable ethanol producing microorganism using cheap media ingredients is the cornerstone of the overall process. Thi...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-012-0098-9
更新日期：2013-10-01 00:00:00
abstract：:The domestic yak (Bos grunniens) from the Qinghai-Tibet Plateau is an important animal model in high-altitude adaptation studies. Here, we performed the genome-wide selective sweep analysis to identify the candidate copy number variation (CNV) for the high-altitude adaptation of yaks. A total of 531 autosomal CNVs wer...
journal_title：3 Biotech
pub_type：
doi：10.1007/s13205-020-02254-w
更新日期：2020-06-01 00:00:00
abstract：:Alkaline hydrogen peroxide (AHP) as a pretreatment effectively enhances the increasing enzymatic digestibility of oil palm trunk (OPT) for conversion to biofuels and bioproducts in the biorefinery processes. The effect of hydrogen peroxide concentration (1-5%), temperature (50-90 °C), and time (30-90 min) were studied...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-020-02169-6
更新日期：2020-04-01 00:00:00
abstract：:Environmental conditions during the in vitro stages of a micropropagation process can further affect the ex vitro plant performance. In this work, the behaviour of four blue cultivars of statice (Limonium sinuatum) was studied with respect to four distances (18.0, 12.5, 8.0, or 2.0 cm) between culture tubes and the li...
journal_title：3 Biotech
pub_type：
doi：10.1007/s13205-018-1367-z
更新日期：2018-08-01 00:00:00
abstract：:Quorum sensing (QS) plays an important role in virulence of Pseudomonas aeruginosa, blocking of QS ability are viewed as viable antimicrobial chemotherapy and which may prove to be a safe anti-virulent drug. Bioactive components from Piper betle have been reported to possess antimicrobial ability. This study envisages...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-015-0348-8
更新日期：2016-06-01 00:00:00
abstract：:The wound healing process is characterized by varied biological and molecular cascades including inflammation, tissue proliferation, and remodeling phase. To augment and maintain these cascades, an all-natural matrix system is proposed. Biocompatible biopolymers, sodium alginate and gelatin, were employed to prepare m...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-020-02453-5
更新日期：2020-11-01 00:00:00
abstract：:In this overview, the authors have discussed the potential advantages of the association between mycorrhizae and plants, their mutual accelerated growth under favorable conditions and their role in nutrient supply. In addition, methods for isolating mycorrhizae are described and spore morphologies and their adaptation...
journal_title：3 Biotech
pub_type： 杂志文章,评审
doi：10.1007/s13205-020-02188-3
更新日期：2020-05-01 00:00:00
abstract：:Statistical experimental designs were used to optimize conditions for recombinant Burkholderia pyrrocinia feruloyl esterase (BpFae) production in bacteria under lactose induction. After optimization by single factor design, Plackett-Burman design, steepest ascent design and the response surface method, the optimal con...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-020-02198-1
更新日期：2020-05-01 00:00:00
abstract：:The capacity of two homoserine lactones to stimulate the marine bacteria Pseudoalteromonas ulvae (TC14 strain) for its capacity to form a biofilm when exposed to a potent antibiofilm compound AS162 is reported. Effective concentrations (EC50) of AS162 at 24 h, 48 h, and 72 h were, respectively, of 4.3, 4.4, and 6.0 µM...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-019-1866-6
更新日期：2019-09-01 00:00:00
abstract：:Pectin derived from plant waste sources is currently focused as an economical and eco-friendly approach. Optimization of pectin extraction from muskmelon peel by response surface methodology (RSM) was investigated in this study. Box-Behnken Design (BBD) was used to identify the optimal level of the extraction variable...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-017-0655-3
更新日期：2017-05-01 00:00:00
abstract：:Differential expression of transgenes in transgenic animals is one of the main drawbacks of pronuclear injection. To overwhelm this issue, the genetic constructs are equipped with insulators. In this study, the consensus of exerting chicken hypersensitive site-4 (cHS4) insulator was examined on the shield of phosphogl...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-019-1786-5
更新日期：2019-07-01 00:00:00
abstract：:Salmonella typhimurium (S. typhimurium) represents an important global public health problem and has the ability to survive under desiccation conditions in foods and food processing facilities for years. The aim of this study was to investigate the effects of Allium sativum (A. sativum) and Cuminum cyminum (C. cyminum...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-020-02286-2
更新日期：2020-07-01 00:00:00
abstract：:In this study, the endophytic capacity of B. bassiana was determined for two barley (Hordeum vulgare) varieties, Josefa and Esmeralda, inoculated with a seedling immersion at three different concentrations (1 × 106, 1 × 107 and 1 × 108 conidia/mL). Seedling length and chlorophyll content were found to be not affected ...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-018-1548-9
更新日期：2019-01-01 00:00:00
abstract：:Cassava is an important food for millions of people around the world. However, cassava is deficient in protein, iron, zinc, pro-vitamin A and vitamin E. Cassava biofortified with pro-vitamin A can help reduce Vitamin A Deficiency among the undernourished communities that rely upon it for sustenance. BioCassava Plus pr...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-014-0243-8
更新日期：2015-08-01 00:00:00
abstract：:The natural estrogen 17β-estradiol (17β-E2) is a major endocrine disruptor. Accordingly, due to their frequent presence in global surface waters, prolonged exposure to estrogen-contaminated water may disrupt sexual development in animals. It has adverse effects on wildlife and humans. To date, the most effective strat...
journal_title：3 Biotech
pub_type：
doi：10.1007/s13205-020-2155-0
更新日期：2020-04-01 00:00:00
abstract：:The bacterial strain producing thermostable, alklophilic alpha-amylase was identified as Bacillus amyloliquefaciens KCP2 using 16S rDNA gene sequencing data (NCBI Accession No: KF112071). Medium components were optimized through the statistical approach for the synthesis of alpha-amylase by the organism under solid-st...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-014-0213-1
更新日期：2015-04-01 00:00:00
abstract：:Bacterial virulence is controlled by a cascade of genes influenced by quorum sensing alias bacterial signalling.The present study was intended to develop an effective module that could constrain bacterial communication without harming the host. Quorum quenching ability of Tribulus terrestris was screened upon chromoge...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-019-1695-7
更新日期：2019-04-01 00:00:00
abstract：:Several proteins and peptides of microbial origin are reported for their elicitor properties, which play a vital role in the development of local and systemic resistances in plants. In this study, the efficacy of total crude proteins (TCP) extracted from six different Trichoderma spp. (T. asperellum, T. harzianum, T. ...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-017-0816-4
更新日期：2017-07-01 00:00:00
abstract：:Only a few Impatiens spp. from South India (one of the five centers of diversity for Impatiens species) were included in the published datum of molecular phylogeny of the family Balsaminaceae. The present investigation is a novel attempt to reveal the phylogenetic association of Impatiens species of South India, by pl...
journal_title：3 Biotech
pub_type：
doi：10.1007/s13205-016-0574-8
更新日期：2016-12-01 00:00:00
abstract：:A soil bacterium, Bacillus subtilis, isolated from the rhizosphere of Chilli, showed high antagonistic activity against Colletotrichum gloeosporioides OGC1. A clear inhibition zone of 0.5-1 cm was observed in dual plate assay. Microscopic observations showed a clear hyphal lysis and degradation of fungal cell wall. In...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-013-0134-4
更新日期：2014-04-01 00:00:00
abstract：:This bibliometric-based review analyses the trends in 1010 published articles (1990 to mid-2018) on the high-value application of Chlorella, and illustrates the evolution and latest tendencies at a global level by the number of publications and their distribution, issuing institutions and countries or regions, the sou...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-020-2102-0
更新日期：2020-03-01 00:00:00
abstract：:Co-cultures of Bacillus subtilis and Kluyveromyces marxianus were investigated in submerged fermentation for xylanase production at shake-flask scale. Xylanase production markedly increased when arabinose, xylose, or hazelnut shells were used as the single carbon source. Maximal xylanase of 49.5 IU/mL was achieved wit...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-018-1315-y
更新日期：2018-07-01 00:00:00
abstract：:Viral diseases affecting sweetpotato are the most devastating and cause up to 98 % yield loss. In this paper, we report, meristem culture, graft transmission and virus indexing for management of viral pathogens in seven elite sweetpotato cultivars. Plantlets were developed in vitro from the apical meristematic dome wi...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-012-0080-6
更新日期：2013-04-01 00:00:00
abstract：:In the present study, an effort has been made to optimize various culture conditions for enhanced production of anthocyanin. Nutrient content of MS medium (ammonium to potassium nitrate ratio and phosphate concentration) had a profound influence on the cell biomass and anthocyanin accumulation in cell suspension cultu...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-018-1146-x
更新日期：2018-03-01 00:00:00
abstract：:Electroporation parameters can be optimized by coupling RC constant values with the amount of electrical power dissipation in the electroporation medium. Electroporation efficiency increases more steeply with power at low power values. ...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-012-0105-1
更新日期：2013-08-01 00:00:00
abstract：:Energy efficiency ratio is significant in completely estimating lignocellulosic biomass pretreatment. In this work, rice straw (RS) was pretreated by ultra-high pressure (UHP), ionic liquid microemulsion (ILM), and a combination of UHP and ILM (ILM + UHP) at mild temperature. The chemical composition, crystalline stru...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-018-1216-0
更新日期：2018-04-01 00:00:00
abstract：:Somatic embryogenesis is an important and wonderful biotechnological tool used to develop whole plant from a single or a group of somatic cells. The differentiated somatic cells become totipotent stem cells by drastic reprogramming of a wide range of cellular activities, leading to the acquisition of embryogenic compe...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-021-02649-3
更新日期：2021-02-01 00:00:00
abstract：:Five bacterial strains were isolated from the hemocoel of the greater wax moth larvae (Galleria mellonella) infected with the entomopathogenic nematodes: Heterorhabditis bacteriophora HP88, Heterorhabditis indicus RM1 and Heterorhabditis sp (S1), Steinernema abbasi and Steinernema sp. (S II). Strains were identified a...
journal_title：3 Biotech
pub_type： 杂志文章
doi：10.1007/s13205-016-0594-4
更新日期：2017-05-01 00:00:00
