Genome-wide analysis of tunicamycin-induced endoplasmic reticulum stress response and the protective effect of endoplasmic reticulum inhibitors in neonatal rat cardiomyocytes.

Abstract:

:Tunicamycin (TM) is an inducer of endoplasmic reticulum (ER) stress. However, which genes related to ER stress was induced in cardiomyocytes on a genome-wide scale remains poorly understood. Salubrinal and its derivatives are ER stress inhibitors. However, the cellular protection mechanisms remain unresolved. Neonatal rat cardiomyocytes were cultured from ventricles of one-day-old Wistar rats. Cells were exposed to salubrinal, its derivatives (PP1-12, PP1-24) or vehicle followed by TM treatment at different times. Total RNA was isolated from cells for RNA-sequencing analysis. The expressions of 189, 182, 556, 860, and 1314 genes were changed in cells exposed to TM for 1, 3, 6, 12, and 24 h. Five well-known UPR genes (Hspa5, Hsp90b1, Calr, Ddit3, and Atf4) were significantly increased in a time-dependent manner. Six not well-known genes (Hyou1, Herpud1, Manf, Creld2, Sdf2l1, and Slc3a2) were highlighted to be involved in ER stress. Compared with TM-only treated cells, the expressions of 36 genes upregulated by TM and 74 genes downregulated by TM were reversed by salubrinal. In comparison, 121 genes upregulated by TM and 92 genes downregulated by TM were reversed by PP1-12. Most genes altered by salubrinal are in the category of transcription (1 h) and cell cycle (24 h). Most genes altered by PP1-12 are in the category of response to ER stress (3 h) and cell cycle (24 h). Our findings help elucidate the mechanism for TM treatment and may be useful for future drug screens involved in ER stress.

journal_name

Mol Cell Biochem

authors

Liu CL,Zhong W,He YY,Li X,Li S,He KL

doi

10.1007/s11010-015-2639-0

subject

Has Abstract

pub_date

2016-02-01 00:00:00

pages

57-67

issue

1-2

eissn

0300-8177

issn

1573-4919

pii

10.1007/s11010-015-2639-0

journal_volume

413

pub_type

杂志文章
  • Vitamin A inhibits lipoperoxidation ascorbate-Fe++ dependent of rat kidney microsomes and mitochondria.

    abstract::In the present study it was investigated if Vitamin A supplementation could protect rat kidney microsomes and mitochondria from in vitro lipoperoxidation. After incubation of rat kidney microsomes and mitochondria in an ascorbate-Fe+2 system, at 37 degrees C during 60 min, it was observed that the total cpm/mg protein...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF00229473

    authors: Piergiacomi VA,Palacios A,Catalá A

    更新日期:1996-12-20 00:00:00

  • Cytotoxicity of glucoevatromonoside alone and in combination with chemotherapy drugs and their effects on Na+,K+-ATPase and ion channels on lung cancer cells.

    abstract::Cardiac glycosides (CGs) are useful drugs to treat cardiac illnesses and have potent cytotoxic and anticancer effects in cultured cells and animal models. Their receptor is the Na+,K+ ATPase, but other plasma membrane proteins might bind CGs as well. Herein, we evaluated the short- and long-lasting cytotoxic effects o...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-020-04040-x

    authors: Schneider NFZ,Menegaz D,Dagostin ALA,Persich L,Rocha SC,Ramos ACP,Cortes VF,Fontes CFL,de Pádua RM,Munkert J,Kreis W,Braga FC,Barbosa LA,Silva FRMB,Simões CMO

    更新日期:2021-01-18 00:00:00

  • NAD hydrolysis: chemical and enzymatic mechanisms.

    abstract::The pyridine nucleotides have important non-redox activities as cellular effectors and metabolic regulators [1-3]. The enzyme-catalyzed cleavage of the nicotinamide-ribosyl bond of NAD+ and the attendant delivery of the ADPRibosyl moiety to acceptors is central to these many diverse biological activities. Included are...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章,评审

    doi:10.1007/BF00928468

    authors: Oppenheimer NJ

    更新日期:1994-09-01 00:00:00

  • Cell-cell and cell-matrix adhesion molecules in human heart and lung transplants.

    abstract::The interaction of immune cells with endothelial and target cells and extracellular matrix in human organ transplants is regulated by a number of receptor-ligand molecules. The molecules mediating intercellular adhesion and activation are classified as integrin, immunoglobulin and selectin families. In the present stu...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF00944779

    authors: Steinhoff G,Haverich A

    更新日期:1995-06-07 00:00:00

  • Alterations of beta3-adrenoceptors expression and their myocardial functional effects in physiological model of chronic exercise-induced cardiac hypertrophy.

    abstract::Physical training induces cardiovascular autonomic nervous system regulation adaptations, which could result from beta adrenergic receptor (AR) modifications. Among them, beta(3 )AR alterations have been recently reported but their functional effect remained to discuss. To explain the beta(3) AR gene expression in rel...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-006-9370-9

    authors: Barbier J,Rannou-Bekono F,Marchais J,Tanguy S,Carré F

    更新日期:2007-06-01 00:00:00

  • Studies on the adrenal cortex of hypophysectomized rats: a model for abnormal cellular atrophy and death.

    abstract::Biochemical and ultrastructural studies indicate that the atrophy of adrenal cortex in hypoyhysectomized rats involves the following changes: (1) One to two days after hypophysectomy, there is loss of "template activity" resulting from cumulative DNA-damage and heterochromatinization. In vivo ACTH-administration led t...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF01793330

    authors: Tchen TT,Chan SW,Kuo TH,Mostafapour KM,Drzewiecki VH

    更新日期:1977-04-12 00:00:00

  • Modulation of the c-Jun N-terminal kinase activity in the embryonic heart in response to anoxia-reoxygenation: involvement of the Ca2+ and mitoKATP channels.

    abstract::Whether the response of the fetal heart to ischemia-reperfusion is associated with activation of the c-Jun N-terminal kinase (JNK) pathway is not known. In contrast, involvement of the sarcolemmal L-type Ca2+ channel (LCC) and the mitochondrial KATP (mitoKATP) channel has been established. This work aimed at investiga...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-008-9750-4

    authors: Sarre A,Gardier S,Maurer F,Bonny C,Raddatz E

    更新日期:2008-06-01 00:00:00

  • Radiation protection of HepG2 cells by Podophyllum hexandrum Royale.

    abstract::Radioprotection by an aqueous extract of Podophyllum hexandrum (RP-1) was investigated in HepG2 cells by evaluating colony forming efficacy (CFE), redox status of mitochondria, reactive oxygen species (ROS), generation of nitric oxide (NO), peroxidation of lipids and intracellular glutathione. Lower concentrations of ...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1023/a:1024925612233

    authors: Gupta D,Arora R,Garg AP,Goel HC

    更新日期:2003-08-01 00:00:00

  • Carnitine requirement of vascular endothelial and smooth muscle cells in imminent ischemia.

    abstract::Vascular endothelial and -smooth muscle cells have been shown to use fatty acids as substrates for oxidative phosphorylation. Endothelial cells are more vulnerable to oxidative stress than muscle cells and are prone to loose carnitine early during hypoperfusion. This has been suggested by two observations. The first i...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF01270579

    authors: Hülsmann WC,Dubelaar ML

    更新日期:1992-10-21 00:00:00

  • Release of ischemia in paced rat Langendorff hearts by supply of L-carnitine: role of endogenous long-chain acylcarnitine.

    abstract::Rat Langendorff hearts perfused with media that do not contain erythrocytes or fluorocarbon as oxygen carriers are borderline aerobic during 5 Hz pacing. This follows from the release of catabolic products measured: lactate, urate and Iysophosphatidyl-choline (IysoPC). Addition of L-carnitine to the perfusion medium r...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF00239323

    authors: Hulsmann WC,Peschechera A,Serafini F,Ferrari LE

    更新日期:1996-03-09 00:00:00

  • Molecular biology of protein kinase C signaling in cardiac myocytes.

    abstract::The PKC family of serine/threonine kinases have been implicated in a diverse array of cellular responses. Adult cardiac myocytes express multiple PKC isozymes, which participate in the response of muscle cells to extracellular stimuli, modulate contractile properties, and promote cell growth and survival. Recently, th...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章,评审

    doi:10.1023/a:1012261903611

    authors: Malhotra A,Kang BP,Opawumi D,Belizaire W,Meggs LG

    更新日期:2001-09-01 00:00:00

  • Preischemic infusion of alpha-human atrial natriuretic peptide elicits myoprotective effects against ischemia reperfusion in isolated rat hearts.

    abstract::Carperitide, a synthetic alpha-human atrial natriuretic peptide (ANP) is a newly developed drug for the treatment of heart failure. However, effects of carperitide on susceptibility to ischemia reperfusion injury are left to be determined. Isolated rat hearts were subjected to Langendorff perfusion. Six hearts receive...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1023/a:1024148621505

    authors: Okawa H,Horimoto H,Mieno S,Nomura Y,Yoshida M,Shinjiro S

    更新日期:2003-06-01 00:00:00

  • Cell swelling, impulse conduction, and cardiac arrhythmias in the failing heart. Opposite effects of angiotensin II and angiotensin (1-7) on cell volume regulation.

    abstract::The influence of hypotonic solution on cell volume and electrophysiology properties of the failing heart of cardiomyopathic hamsters (TO-2) was investigated. The results showed an increase in cell volume of quiescent isolated ventricular myocytes by 66% within 30 min. Angiotensin (1-7) [Ang (1-7)] (10(-8) M) administe...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-009-0135-0

    authors: De Mello WC

    更新日期:2009-10-01 00:00:00

  • Heparin releasable and nonreleasable forms of heparan sulfate proteoglycan are found on the surfaces of cultured porcine aortic endothelial cells.

    abstract::Evidence suggests that endothelial cell layer heparan sulfate proteoglycans include a variety of different sized molecules which most likely contain different protein cores. In the present report, approximately half of endothelial cell surface associated heparan sulfate proteoglycan is shown to be releasable with solu...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF00230873

    authors: Lowe-Krentz LJ,Thompson K,Patton WA 2nd

    更新日期:1992-01-15 00:00:00

  • Remote renal preconditioning-induced cardioprotection: a key role of hypoxia inducible factor-prolyl 4-hydroxylases.

    abstract::Remote preconditioning is a unique phenomenon in which brief episodes of ischemia and reperfusion to remote organ protect the target organ against sustained ischemia-reperfusion (I/R)-induced injury. Protective effects of remote renal preconditioning (RRPC) are well established in heart, but their mechanisms still rem...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-008-9717-5

    authors: Kant R,Diwan V,Jaggi AS,Singh N,Singh D

    更新日期:2008-05-01 00:00:00

  • Porphyrin biosynthesis from prophobilinogen by duck blood hemolysate.

    abstract::The formation of porphyrins from porphobilinogen by a duck blood hemolysate was examined. The system was found to form mainly protoporphyrin IX and hemin, and accumulated lesser amounts of uroporphyrins, hepatacarboxylic porphyrin, and coproporphyrins. By storage at -20 degrees the accumulation of uroporphyrins and he...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF01732060

    authors: Frydman RB,Frydman B,Feinstein G

    更新日期:1977-07-05 00:00:00

  • On the cell-free system of protein synthesis from mammalian mitochondria.

    abstract::Some properties of a submitochondrial cell-free system for protein synthesis are described. The system was prepared from rat liver mitochondria lysed with Triton X-100, and the lysate was characterized by a linear rate of [14C]amino acid incorporation for 15-20 min with subsequent decline in activity. The incorporatio...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF01734170

    authors: Kisselev OI,Gaitskhoki VS,Neifakh SA

    更新日期:1977-02-04 00:00:00

  • The significance of aryl acylamidase activity of acetylcholinesterase in osteoblast differentiation and mineralization.

    abstract::Osteoblast differentiation is an essential event in the developmental process, which is favoured by the production of extra cellular matrix proteins and various enzymes including discrete ones like acetylcholinesterase (AChE). Despite the fact that AChE facilitates osteoblast differentiation, the significance of its c...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-017-3167-x

    authors: Chinnadurai RK,Saravanaraman P,Boopathy R

    更新日期:2018-03-01 00:00:00

  • Secretion of MCP-1 and IL-6 by cytokine stimulated production of reactive oxygen species in endothelial cells.

    abstract::Endothelial cells are known to produce reactive oxygen species by several mechanisms. Functional consequences of increased production of reactive oxygen species were investigated in vitro after stimulation with several proinflammatory cytokines. Time dependent increases in DCF-fluorescence as a measure of reactive oxy...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1023/a:1007059616914

    authors: Volk T,Hensel M,Schuster H,Kox WJ

    更新日期:2000-03-01 00:00:00

  • BNIP3 induces IL6 and calcineurin/NFAT3 hypertrophic-related pathways in H9c2 cardiomyoblast cells.

    abstract::Ischemia/reperfusion injury causes cardiomyocyte apoptosis, ventricular remodeling, leading to a dilated heart. Hypoxia is one of the causes involved in ischemia damage, and BNIP3 is a hypoxia-inducible marker and also a sensor to induce mitochondria-dependent apoptosis. Recent reports discussed ablating BNIP3 can res...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-010-0578-3

    authors: Weng YJ,Kuo WW,Kuo CH,Tung KC,Tsai CH,Lin JA,Tsai FJ,Hsieh DJ,Huang CY,Hwang JM

    更新日期:2010-12-01 00:00:00

  • Dissociation and unfolding of inducible nitric oxide synthase oxygenase domain identifies structural role of tetrahydrobiopterin in modulating the heme environment.

    abstract::The oxygenase domain of the inducible nitric oxide synthase, Delta65 iNOSox is a dimer that binds heme, L-Arginine (L-Arg), and tetrahydrobiopterin (H(4)B) and is the site for NO synthesis. The role of H(4)B in iNOS structure-function is complex and its exact structural role is presently unknown. The present paper pro...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-005-9027-0

    authors: Sengupta R,Sahoo R,Ray SS,Dutta T,Dasgupta A,Ghosh S

    更新日期:2006-03-01 00:00:00

  • Typical phenotypic spectrum of velocardiofacial syndrome occurs independently of deletion size in chromosome 22q11.2.

    abstract::Velocardiofacial syndrome (VCFS) is a relatively common developmental disorder characterized by craniofacial anomalies and conotruncal heart defects. Many VCFS patients present hemizygous deletions on part of chromosome 22q11.2; suggestive that haploinsufficiency in this region is responsible for this etiology. Most 2...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-007-9450-5

    authors: Sandrin-Garcia P,Abramides DV,Martelli LR,Ramos ES,Richieri-Costa A,Passos GA

    更新日期:2007-09-01 00:00:00

  • Erythrocyte-mediated microinjection of horseradish peroxidase into BHK cells. Subcellular localization by light and electron microscopy.

    abstract::In order to establish the distribution with time of proteins microinjected into mammalian cells, horseradish peroxidase (HRP) was microinjected into baby hamster kidney (BHK) cells using chicken erythrocyte ghosts. At time intervals following initiation of fusion between ghosts and target cells, samples were fixed wit...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF00229372

    authors: McClung JK,Ulrich RG,Kletzien RF

    更新日期:1987-01-01 00:00:00

  • Biomarker study of the biological parameter and neurotransmitter levels in autistics.

    abstract::Autism is a prevalent developmental disorder that combines repetitive behaviours, social deficits and language abnormalities. The present study aims to assess the autistic subjects using DSM IV-TR criteria followed with the analysis of neurotransmitters, biochemical parameters, oxidative stress and its ions in two gro...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-020-03851-2

    authors: Meyyazhagan A,Balasubramanian B,Easwaran M,Alagamuthu KK,Shanmugam S,Kuchi Bhotla H,Pappusamy M,Arumugam VA,Thangaraj A,Kaul T,Keshavarao S,Cacabelos R

    更新日期:2020-11-01 00:00:00

  • Conference overview: molecular mechanisms of metal toxicity and carcinogenesis.

    abstract::Chronic exposure to many heavy metals and metal-derivatives is associated with an increased risk of cancer, although the mechanisms of tumorigenesis are largely unknown. Approximately 125 scientists attended the 3rd Conference on Molecular Mechanisms of Metal Toxicity and Carcinogenesis and presented the latest resear...

    journal_title:Molecular and cellular biochemistry

    pub_type:

    doi:10.1007/s11010-005-8210-7

    authors: Bower JJ,Leonard SS,Shi X

    更新日期:2005-11-01 00:00:00

  • Protective effects of N-acetylcysteine against hyperoxaluria induced mitochondrial dysfunction in male wistar rats.

    abstract::The purpose of the present study was to evaluate the nephro-protective potential of N-acetylcysteine against hyperoxaluria-induced renal mitochondrial dysfunction in rats. Nine days dosing of 0.4 % ethylene glycol +1 % ammonium chloride, developed hyperoxaluria in male wistar rats which resulted in renal injury and dy...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-015-2402-6

    authors: Sharma M,Kaur T,Singla SK

    更新日期:2015-07-01 00:00:00

  • Epigenetic regulation of cardiac muscle-specific genes in H9c2 cells by Interleukin-18 and histone deacetylase inhibitor m-carboxycinnamic acid bis-hydroxamide.

    abstract::Interleukin-18 (IL-18) elicited a robust hypertrophy response in H9c2 cardiomyocytes as judged by their accelerated rates of protein synthesis and increased cell size. Evidently, IL-18 treatment also induced a cardiac hypertrophy-specific program of gene expression in H9c2 cardiomyocytes since they elicited enhanced e...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-008-9720-x

    authors: Majumdar G,Johnson IM,Kale S,Raghow R

    更新日期:2008-05-01 00:00:00

  • Simulated colon fiber metabolome regulates genes involved in cell cycle, apoptosis, and energy metabolism in human colon cancer cells.

    abstract::High level of dietary fiber has been epidemiologically linked to protection against the risk for developing colon cancer. The mechanisms of this protection are not clear. Fermentation of dietary fiber in the colon results in production of for example butyrate that has drawn attention as a chemopreventive agent. Polyde...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-011-0894-2

    authors: Putaala H,Mäkivuokko H,Tiihonen K,Rautonen N

    更新日期:2011-11-01 00:00:00

  • Noradrenaline and its end metabolite 3-methoxy-4-hydroxyphenylglycol inhibit lymphocyte chemotaxis: role of alpha- and beta-adrenoreceptors.

    abstract::The capacity of noradrenaline (NA) and its end metabolite 3-methoxy-4-hydroxyphenylglycol (MHPG) to modulate the chemotaxis of lymphocytes from a primary immunocompetent organ (thymus) and a secondary one (spleen) was investigated over a range of concentrations from 10(-12) M to 10(-5) M. Lymphocyte chemotaxis was eva...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1023/a:1027349904589

    authors: García JJ,del Carmen Sáez M,De la Fuente M,Ortega E

    更新日期:2003-12-01 00:00:00

  • Purification and properties of a membrane-bound L-asparaginase of Tetrahymena pyriformis.

    abstract::L-Asparaginase activity reaches maximal values at the stationary phase of growth of Tetrahymena pyriformis and fluctuates upon the growth conditions and the composition of the medium. Most of the L-asparaginase activity (80%) is associated with the endoplasmic reticulum, and the remaining with the pellicles. Detergent...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF00225652

    authors: Triantafillou DJ,Georgatsos JG,Kyriakidis DA

    更新日期:1988-05-01 00:00:00