Simulated colon fiber metabolome regulates genes involved in cell cycle, apoptosis, and energy metabolism in human colon cancer cells.

Abstract:

:High level of dietary fiber has been epidemiologically linked to protection against the risk for developing colon cancer. The mechanisms of this protection are not clear. Fermentation of dietary fiber in the colon results in production of for example butyrate that has drawn attention as a chemopreventive agent. Polydextrose, a soluble fiber that is only partially fermented in colon, was fermented in an in vitro colon simulator, in which the conditions mimic the human proximal, ascending, transverse, and distal colon in sequence. The subsequent fermentation metabolomes were applied on colon cancer cells, and the gene expression changes studied. Polydextrose fermentation down-regulated gene ontology classes linked with cell cycle, and affected number of metabolically active cells. Furthermore, up-regulated effects on classes linked with apoptosis, with increased caspase 2 and 3 activity, implicate that polydextrose fermentation plays a role in induction of apoptosis in colon cancer cells. The up-regulated genes involved also key regulators of lipid metabolism, such as PPARα and PGC-1α. These results offer hypotheses for the mechanisms of two health benefits linked with consumption of dietary fiber, reducing risk of development of colon cancer, and dyslipidemia.

journal_name

Mol Cell Biochem

authors

Putaala H,Mäkivuokko H,Tiihonen K,Rautonen N

doi

10.1007/s11010-011-0894-2

subject

Has Abstract

pub_date

2011-11-01 00:00:00

pages

235-45

issue

1-2

eissn

0300-8177

issn

1573-4919

journal_volume

357

pub_type

杂志文章
  • Importance of LXR-alpha transcriptome in the modulation of innate immunity.

    abstract::Liver-X-Receptor alpha (LXR-alpha) that belongs to nuclear receptor/transcriptional factor family has been recognized to play crucial role in the regulation of lipid metabolism and inflammation. Consequently, the present study was addressed to explore the functional genomics of LXR-alpha within human blood immunomodul...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-006-9216-5

    authors: Kaul D,Gautam A,Sikand K

    更新日期:2006-11-01 00:00:00

  • Patch clamp analysis of chemically activated and modulated ionic channels in isolated mammalian cardiomyocytes.

    abstract::Techniques routinely utilized in this laboratory for recording currents through single ionic channels of isolated atrial and ventricular rat cardiomyocytes are described. Emphasis is placed in two main areas: first, on methods for obtaining a sufficient yield of Ca++-tolerant myocytes suitable for patch clamp experime...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF00231002

    authors: Vogel SM

    更新日期:1988-03-01 00:00:00

  • Synthesis, characterization and bioactivity studies of novel 1,3,4-oxadiazole small molecule that targets basic phospholipase A2 from Vipera russelli.

    abstract::Secretory phospholipase A2 (sPLA2) is a key enzyme participating in the inflammatory cascade followed by the action of cyclooxygenase-2 and lipoxygenases. Therefore, inhibitors of sPLA2 could be used as potent anti-inflammatory agents to treat the early phase of inflammation. In this study, we have prepared the fenopr...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-016-2888-6

    authors: Kameshwar VH,R KJ,Priya BS,Swamy SN

    更新日期:2017-02-01 00:00:00

  • CK2alpha/CK1alpha chimeras are sensitive to regulation by the CK2beta subunit.

    abstract::The effect of CK2beta on the activity of CK2alpha and other protein kinases that can bind this regulatory subunit is not fully understood. In an attempt to improve our understanding of this effect, chimeras of CK2alpha and CK1alpha have been constructed. These chimeras contain different portions of the CK2alpha amino ...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-008-9825-2

    authors: Jedlicki A,Allende CC,Allende JE

    更新日期:2008-09-01 00:00:00

  • Functional validation of ATF4 and GADD34 in Neuro2a cells by CRISPR/Cas9-mediated genome editing.

    abstract::Activating transcription factor 4 (ATF4), which is ubiquitously expressed, plays a crucial role in regulating various stress-responsive genes under pathophysiological conditions. Further, growth arrest and DNA damage-inducible gene 34 (GADD34), a downstream target of ATF4, has been reported to negatively regulate ATF4...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-017-3156-0

    authors: Oh-Hashi K,Sugiura N,Amaya F,Isobe KI,Hirata Y

    更新日期:2018-03-01 00:00:00

  • Involvement of nuclear factor-1 (NF1) binding motif in the regucalcin gene expression of rat kidney cortex: the expression is suppressed by cisplatin administration.

    abstract::The binding of nuclear factor on the promoter region of the regucalcin gene and the expression of regucalcin in the kidney cortex of rats was investigated. Nuclear extracts from kidney cortex were used for oligonucleotide competition gel mobility shift assay. An oligonucleotide between position -523 and -506 in the 5'...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1023/a:1011040805597

    authors: Misawa H,Yamaguchi M

    更新日期:2001-03-01 00:00:00

  • The utrophin-beta 2 syntrophin complex regulates adipocyte lipid droplet size independent of adipogenesis.

    abstract::Utrophin is a widely expressed cytoskeleton protein and is associated with lipid droplets (LDs) in adipocytes. The scaffold protein beta 2 syntrophin (SNTB2) controls signaling events by recruiting distinct membrane and cytoskeletal proteins, and binds to utrophin. Here we show that SNTB2 forms a complex with utrophin...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-018-3409-6

    authors: Krautbauer S,Neumeier M,Haberl EM,Pohl R,Feder S,Eisinger K,Rein-Fischboeck L,Buechler C

    更新日期:2019-02-01 00:00:00

  • Remote renal preconditioning-induced cardioprotection: a key role of hypoxia inducible factor-prolyl 4-hydroxylases.

    abstract::Remote preconditioning is a unique phenomenon in which brief episodes of ischemia and reperfusion to remote organ protect the target organ against sustained ischemia-reperfusion (I/R)-induced injury. Protective effects of remote renal preconditioning (RRPC) are well established in heart, but their mechanisms still rem...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-008-9717-5

    authors: Kant R,Diwan V,Jaggi AS,Singh N,Singh D

    更新日期:2008-05-01 00:00:00

  • Carbon monoxide and bilirubin from heme oxygenase-1 suppresses reactive oxygen species generation and plasminogen activator inhibitor-1 induction.

    abstract::Heme oxygenase-1 (HO-1) responds to a variety of oxidative stresses. We examined whether HO-1 expression influences pro-thrombotic processes, in which the involvement of oxidative stress has been reported. Since HO-1 knockout mice with a C57/BL6J background were not viable, embryonic cells from HO-1 deficient mice (E1...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-006-9190-y

    authors: Matsumoto H,Ishikawa K,Itabe H,Maruyama Y

    更新日期:2006-10-01 00:00:00

  • Modulation of fatty acid-binding capacity of heart fatty acid-binding protein by oxygen-derived free radicals.

    abstract::In this study, we examined the effects of exposure of heart fatty acid-binding protein (h-FABP) to chemically generated O2- or OH. with respect to its oleate binding and to its electrophoretic properties. Purified rat h-FABP at 40 microM scavenged as much as 30% O2- and 85% OH.. On the other hand, when 2 nmol (4 micro...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF00231380

    authors: Jones RM,Prasad MR,Das DK

    更新日期:1990-10-15 00:00:00

  • Association between coronary endothelial dysfunction and local inflammation of atherosclerotic coronary arteries.

    abstract::We have examined a possibility whether or not severity and extent of coronary atherosclerosis may associate with degree of local inflammation in relation to endothelial dysfunction as is indicated by reduced NO formation. Blood samples were obtained from aortic root (Ao) and coronary sinus (CS) of 39 patients who unde...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:

    authors: Matsubara T,Ishibashi T,Hori T,Ozaki K,Mezaki T,Tsuchida K,Nasuno A,Kubota K,Tanaka T,Miida T,Aizawa Y,Nishio M

    更新日期:2003-07-01 00:00:00

  • Novel frequenin-modulated Ca2+-signaling membrane guanylate cyclase (ROS-GC) transduction pathway in bovine hippocampus.

    abstract::Frequenin is a member of the neuronal Ca(2+) sensor protein family, implicated in being the modulator of the neurotransmitter release, potassium channels, phosphatidylinositol signaling pathway and the Ca(2+)-dependent exocytosis of dense-core granules in the PC12 cells. Frequenin exhibits these biological activities ...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-006-9215-6

    authors: Fik-Rymarkiewicz E,Duda T,Sharma RK

    更新日期:2006-10-01 00:00:00

  • Experimental evidence for the therapeutic potential of tempol in the treatment of acute liver injury.

    abstract::Oxidative stress is one of the mechanisms involved in the acute carbon tetrachloride (CCl4)-induced hepatotoxicity. Since 4-hydroxy-2,2,6,6-tetramethylpiperidin-1-oxyl, known as tempol, has powerful antioxidant properties, we investigated its potential hepatoprotective effects and the underlying mechanisms that may ad...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-015-2572-2

    authors: Abouzied MM,Eltahir HM,Taye A,Abdelrahman MS

    更新日期:2016-01-01 00:00:00

  • Heme oxygenase and antioxidant status in cultured aortic endothelial cells isolated from atherosclerosis-susceptible and -resistant Japanese quail.

    abstract::We have investigated heme oxygenase (HO) and antioxidant status in the novel isolation and characterization of aortic endothelial cells (AECs) from a random bred wild-type strain (WILD) and selectively bred atherosclerosis-susceptible (SUS) and -resistant (RES) strains of Japanese quail. Cultured AECs expressed acetyl...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1023/a:1025555525661

    authors: Hoekstra KA,Godin DV,Kurtu J,Cheng KM

    更新日期:2003-10-01 00:00:00

  • Association of heat-shock proteins in various neurodegenerative disorders: is it a master key to open the therapeutic door?

    abstract::A number of acute and chronic neurodegenerative disorders are caused due to misfolding and aggregation of many intra- and extracellular proteins. Protein misfolding and aggregation processes in cells are strongly regulated by cellular molecular chaperones known as heat-shock proteins (Hsps) that include Hsp60, Hsp70, ...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章,评审

    doi:10.1007/s11010-013-1844-y

    authors: Paul S,Mahanta S

    更新日期:2014-01-01 00:00:00

  • Attenuation of age-related increase of protein carbonylation in the liver of mice by melatonin and curcumin.

    abstract::Protein carbonyls are formed as a consequence of the oxidative modification of proteins by reactive oxygen species and are commonly used as a marker of protein oxidation in cells and tissues. Melatonin has free radical scavenging ability besides its classical role as a hormonal signaling agent. Curcumin, a phytochemic...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-013-1668-9

    authors: Dkhar P,Sharma R

    更新日期:2013-08-01 00:00:00

  • Chemical and immunological properties of B. anthracis arginase and its metabolic involvement.

    abstract::An arginase isolated from a capsulated Bacillus anthracis strain was highly purified and crystallized. The chemical and immunological characteristics of this enzyme re described. Some very important properties differ from those of another bacterial arginase, i.e. Staphylococcus aureus arginase, described in a previous...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF00285642

    authors: Soru E

    更新日期:1983-01-01 00:00:00

  • The tyrosine kinase inhibitor genistein increases basal cAMP and potentiates forskolin-induced cAMP accumulation in A549 human airway epithelial cells.

    abstract::Genistein is often used as an inhibitor of tyrosine kinases. A less studied side effect of genistein is an inhibition of cyclic AMP-phosphodiesterase (cAMP-PDE) activity resulting in increased cAMP accumulation. The effect of genistein on intracellular cAMP-levels, basal and forskolin-induced, was studied in A549 huma...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1023/a:1020655724911

    authors: Burvall KM,Palmberg L,Larsson K

    更新日期:2002-11-01 00:00:00

  • Expression of rat L-FABP in mouse fibroblasts: role in fat absorption.

    abstract::Fatty acid-binding proteins (FABP) are abundant cytosolic proteins whose levels is responsive to nutritional, endocrine, and a variety of pathological states. Although FABPs have been investigated in vitro for several decades, little is known of their physiological function. Liver L-FABP binds both fatty acids and cho...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF01076477

    authors: Schroeder F,Jefferson JR,Powell D,Incerpi S,Woodford JK,Colles SM,Myers-Payne S,Emge T,Hubbell T,Moncecchi D

    更新日期:1993-06-09 00:00:00

  • Casein kinase II in signal transduction and cell cycle regulation.

    abstract::Casein kinase II is a protein serine/threonine kinase that is ubiquitously distributed in eukaryotes. Molecular cloning studies and protein sequence analysis of purified proteins have demonstrated the existence of two related, but distinct, isoenzymic forms of its catalytic subunit in mammals and birds. At present, th...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章,评审

    doi:10.1007/BF01076770

    authors: Litchfield DW,Lüscher B

    更新日期:1993-11-01 00:00:00

  • Advanced glycation end products attenuate the function of tumor necrosis factor-like weak inducer of apoptosis to regulate the inflammatory response.

    abstract::Advanced glycation end products (AGEs) are formed from the non-enzymatic glycation reaction of reducing sugars or their metabolites with the free amino groups of several biomolecules and are known to play pathophysiological roles in various inflammatory diseases. In an earlier study, it was suggested that tumor necros...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-017-3045-6

    authors: Watanabe M,Toyomura T,Wake H,Liu K,Teshigawara K,Takahashi H,Nishibori M,Mori S

    更新日期:2017-10-01 00:00:00

  • A unique surface membrane anchored purine-salvage enzyme is conserved among a group of primitive eukaryotic human pathogens.

    abstract::Previously, we isolated and characterized the gene encoding the 3'-Nucleotidase/Nuclease (Ld3'NT/NU) from the human pathogen, Leishmania donovani. This unique cell surface enzyme has been shown to be involved in the salvage of host-derived purines, which are essential for the survival of this important protozoan paras...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1023/a:1010809420104

    authors: Debrabant A,Bastien P,Dwyer DM

    更新日期:2001-04-01 00:00:00

  • Antioxidant properties of dehydrozingerone and curcumin in rat brain homogenates.

    abstract::The present study investigates the inhibition of lipid peroxidation by dehydrozingerone and curcumin in rat brain homogenates. Both the test compounds inhibited the formation of conjugated dienes and spontaneous lipid peroxidation. These compounds also inhibited lipid peroxidation induced by ferrous ions, ferric-ascor...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF00928368

    authors: Rajakumar DV,Rao MN

    更新日期:1994-11-09 00:00:00

  • Silencing USP22 by asymmetric structure of interfering RNA inhibits proliferation and induces cell cycle arrest in bladder cancer cells.

    abstract::The ubiquitin specific peptidase 22 (USP22) is a positive regulator of the growth of tumors. However, little is known about the impact of USP22 knockdown on the growth of human bladder cells. In the present study, we designed a series of asymmetric interfering RNAs (aiRNAs) and compared the efficacy of aiRNA and conve...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-010-0585-4

    authors: Lv L,Xiao XY,Gu ZH,Zeng FQ,Huang LQ,Jiang GS

    更新日期:2011-01-01 00:00:00

  • Comparative binding study of rat natriuretic peptide receptor-A.

    abstract::The natriuretic peptide receptor-A (NPR-A) is involved in blood pressure and body fluid regulation in order to help maintain cardiovascular homeostasis. It has been shown that these biological effects are mediated through the natriuretic peptide family of hormones, which bind NPR-A according to the rank order ANP>BNP>...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1023/a:1006835808554

    authors: Marquis M,Fenrick R,Pedro L,Bouvier M,De Léan A

    更新日期:1999-04-01 00:00:00

  • Morphological study of TNPO3 and SRSF1 interaction during myogenesis by combining confocal, structured illumination and electron microscopy analysis.

    abstract::Transportin3 (TNPO3) shuttles the SR proteins from the cytoplasm to the nucleus. The SR family includes essential splicing factors, such as SRSF1, that influence alternative splicing, controlling protein diversity in muscle and satellite cell differentiation. Given the importance of alternative splicing in the myogeni...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-020-04023-y

    authors: Costa R,Rodia MT,Zini N,Pegoraro V,Marozzo R,Capanni C,Angelini C,Lattanzi G,Santi S,Cenacchi G

    更新日期:2021-01-15 00:00:00

  • PP2A and DUSP6 are involved in sphingosylphosphorylcholine-induced hypopigmentation.

    abstract::Activation of extracellular signal-related kinase (ERK) is involved in decreased melanogenesis by sphingosylphosphorylcholine (SPC). In the present study, we confirmed that SPC activated ERK and that a specific inhibitor of the ERK pathway (PD98059) recovered SPC-induced hypopigmentation. Moreover, we found that SPC s...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-012-1317-8

    authors: Jeong HS,Park KC,Kim DS

    更新日期:2012-08-01 00:00:00

  • Purinergic system as a potential target for inflammation and toxicity induced by thymol in immune cells and tissues.

    abstract::Thymol is a phytochemical component present in many plants used as food additive in order to promote animal growth due to its several biological properties. However, possible side effects of thymol remain poorly known limited to few reports. In this sense, we evaluated the enzymes of the purinergic signaling such as, ...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-018-3416-7

    authors: Baldissera MD,Souza CF,De Matos AFIM,Baldisserotto B,Stefani LM,da Silva AS

    更新日期:2019-02-01 00:00:00

  • Vanillin as an antioxidant in rat liver mitochondria: inhibition of protein oxidation and lipid peroxidation induced by photosensitization.

    abstract::Using rat liver mitochondria, as model systems, we have examined the ability of the natural compound and the food-flavoring agent, vanillin to protect membranes against oxidative damage induced by photosensitization at concentrations normally used in food preparations. Vanillin, at a concentration of 2.5 mmol/L, has a...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1023/a:1007048313556

    authors: Kamat JP,Ghosh A,Devasagayam TP

    更新日期:2000-06-01 00:00:00

  • The dependence of enhanced lysosomal activity on the cellular aging of bovine aortic endothelial cells.

    abstract::Lysosomes are a cell organelle type processing antimicrobial activity. Here, we investigate the lysosomal activity in a primary cell line, bovine aortic endothelial cells (BAECs), during cellular aging, based on the antimicrobial activity of lysosomes isolated from BAECs at cell passages 4, 6, 8, and 10. Cytochemical ...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-010-0415-8

    authors: Yoon J,Kim KJ,Choi YW,Shin HS,Kim YH,Min J

    更新日期:2010-07-01 00:00:00