Metabolic engineering of Escherichia coli for 1-butanol biosynthesis through the inverted aerobic fatty acid β-oxidation pathway.

Abstract:

:The basic reactions of the clostridial 1-butanol biosynthesis pathway can be regarded to be the inverted reactions of the fatty acid β-oxidation pathway. A pathway for the biosynthesis of fuels and chemicals was recently engineered by combining enzymes from both aerobic and anaerobic fatty acid β-oxidation as well as enzymes from other metabolic pathways. In the current study, we demonstrate the inversion of the entire aerobic fatty acid β-oxidation cycle for 1-butanol biosynthesis. The constructed markerless and plasmidless Escherichia coli strain BOX-3 (MG1655 lacI(Q) attB-P(trc-ideal-4)-SD(φ10)-adhE(Glu568Lys) attB-P(trc-ideal-4)-SD(φ10)-atoB attB-P(trc-ideal-4)-SD(φ10)-fadB attB-P(trc-ideal-4)-SD(φ10)-fadE) synthesises 0.3-1 mg 1-butanol/l in the presence of the specific inducer. No 1-butanol production was detected in the absence of the inducer.

journal_name

Biotechnol Lett

journal_title

Biotechnology letters

authors

Gulevich AY,Skorokhodova AY,Sukhozhenko AV,Shakulov RS,Debabov VG

doi

10.1007/s10529-011-0797-z

subject

Has Abstract

pub_date

2012-03-01 00:00:00

pages

463-9

issue

3

eissn

0141-5492

issn

1573-6776

journal_volume

34

pub_type

杂志文章
  • Stress influenced the aerotolerance of Lactobacillus rhamnosus hsryfm 1301.

    abstract:OBJECTIVE:To investigate the aerotolerance of Lactobacillus rhamnosus hsryfm 1301 and its influencing factors. RESULTS:The growth rate of L. rhamnosus hsryfm 1301 weakened noticeably when the concentration of supplemented H2O2 reached 1 mM, and only 2% of all L. rhamnosus hsryfm 1301 cells survived in MRS broth supple...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-018-2523-6

    authors: Zhang C,Lu J,Yang D,Chen X,Huang Y,Gu R

    更新日期:2018-04-01 00:00:00

  • Heterologous expression of human interleukin-6 in Streptomyces lividans TK24 using novel secretory expression vectors.

    abstract::Streptomyces is an attractive host for heterologous protein secretion. To further optimize its expression capacity, better expression vectors will be helpful. Here, based on pSGL1, a high copy number plasmid present in Streptomyces globisporus C-1027, we constructed a series of novel E. coli-Streptomyces shuttle expre...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-010-0428-0

    authors: Zhu Y,Wang L,Du Y,Wang S,Yu T,Hong B

    更新日期:2011-02-01 00:00:00

  • Enrichment of marine manganese-oxidizing microorganisms using polycaprolactone as a solid organic substrate.

    abstract:OBJECTIVE:Heterotrophic manganese (Mn)-oxidizing microorganisms responsible for biogenic manganese oxide (Bio-MnOx) production are fastidious. Their enrichment is not easily accomplished by merely adding a soluble organic substrate to non-sterile mixed cultures. The objective of this study was to evaluate polycaprolact...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-021-03088-z

    authors: Aoki M,Miyashita Y,Tran PT,Okuno Y,Watari T,Yamaguchi T

    更新日期:2021-01-26 00:00:00

  • Cloning and upscale production of monoamine oxidase N (MAO-N D5) by Pichia pastoris.

    abstract:OBJECTIVE:To clone monoamine oxidase N, that catalyses the selective oxidative deamination or deracemisation of amines into imines, in Pichia pastoris and prove the importance of choosing the proper expression system for its recombinant production. RESULTS:Monoamine oxidase, originating from Aspergillus niger and subj...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-017-2450-y

    authors: Markošová K,Camattari A,Rosenberg M,Glieder A,Turner NJ,Rebroš M

    更新日期:2018-01-01 00:00:00

  • Utilization of nitrite as a nitrogen source by Botryococcus braunii.

    abstract::Nitrite at 2 mM did not affect the growth of Botryococcus braunii and served as the sole nitrogen source giving a minimum biomass doubling time of 4.2 d, which was equal to that of the culture using 4 mM nitrate as nitrogen source. With nitrite at 4 mM, after a lag phase of about 10 d, the alga grew quickly, reaching ...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1023/b:bile.0000013722.45527.18

    authors: Yang S,Wang J,Cong W,Cai Z,Ouyang F

    更新日期:2004-02-01 00:00:00

  • Improvement of the CuZn-superoxide dismutase enzyme activity and stability as a therapeutic agent by modification with polysialic acids.

    abstract::The optimal process for the polysialylation reaction was as follows: polysialicacid (PSA) was activated by periodate oxidation, then coupled to CuZn superoxide dismutase (SOD) with a PSA:SOD molar ratio of 40:1 for 24 h. The resulting polysialylated protein contained 3.9 ± 0.3 mol PSA per mol SOD. SDS-PAGE and atomic ...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-010-0382-x

    authors: Wu JR,Lin Y,Zheng ZY,Lin CC,Zhan XB,Shen YQ

    更新日期:2010-12-01 00:00:00

  • lip2, a novel lipase gene cloned from Aspergillus niger exhibits enzymatic characteristics distinct from its previously identified family member.

    abstract::We have cloned a novel lipase gene, lip2, from Aspergillus niger and expressed it in Escherichia coli. Upon purification of the recombinant Lip2 protein, its properties were characterized. In comparison with a previously identified lipase Lip1, both enzymes are acid lipases (optimal pH <6.5), Ca(2+)-dependent and PMSF...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-010-0238-4

    authors: Yang J,Sun J,Yan Y

    更新日期:2010-07-01 00:00:00

  • Inhibition of Salmonella enteritidis biofilms by Salmonella invasion protein-targeting aptamer.

    abstract::The current study aimed to assess the inhibitory effect of a DNA aptamer (Apt17) which targeted Salmonella invasion proteinA (SipA). The effect of Apt17, on biofilm formation by two Salmonella enteritidis strains, was tested either separately or in combination with ampicillin at different Sub MIC concentrations. Maxim...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-020-02920-2

    authors: Shatila F,Yaşa İ,Yalçın HT

    更新日期:2020-10-01 00:00:00

  • Beneficial bacteria of agricultural importance.

    abstract::The rhizosphere is the soil-plant root interphase and in practice consists of the soil adhering to the root besides the loose soil surrounding it. Plant growth-promoting rhizobacteria (PGPR) are potential agents for the biological control of plant pathogens. A biocontrol strain should be able to protect the host plant...

    journal_title:Biotechnology letters

    pub_type: 杂志文章,评审

    doi:10.1007/s10529-010-0347-0

    authors: Babalola OO

    更新日期:2010-11-01 00:00:00

  • Non-small cell lung cancer: miR-30d suppresses tumor invasion and migration by directly targeting NFIB.

    abstract:OBJECTIVE:To evaluate the role and the molecular mechanism of miR-30d in non-small cell lung cancer (NSCLC). RESULTS:qRT-PCR was used to detect miR-30d expression in NSCLC tissues and cell lines. miR-30d was frequently down-regulated in NSCLC and its expression was associated with clinicopathological features of NSCLC...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-017-2428-9

    authors: Wu Y,Zhang J,Hou S,Cheng Z,Yuan M

    更新日期:2017-12-01 00:00:00

  • A novel assay system for the measurement of transketolase activity using xylulokinase from Saccharomyces cerevisiae.

    abstract::The conventional method of transketolase (TKT) activity assay uses ribose 5-phosphate and xylulose 5-phosphate as substrates. However, a new method of TKT assay is currently required since xylulose 5-phosphate is no longer commercially available and is difficult to synthesize chemically. Although there are effective a...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-007-9616-y

    authors: Lee JY,Cheong DE,Kim GJ

    更新日期:2008-05-01 00:00:00

  • Self-cleaving fusion tags for recombinant protein production.

    abstract::Fusion expression is a common practice for recombinant protein production. Some fusion tags confer solubility on the target protein whereas others provide affinity handles that facilitate purification. However, the tag usually needs to be removed from the final product, which involves using expensive proteases or haza...

    journal_title:Biotechnology letters

    pub_type: 杂志文章,评审

    doi:10.1007/s10529-011-0533-8

    authors: Li Y

    更新日期:2011-05-01 00:00:00

  • Degradation of the phenolic β-ether lignin model dimer and dyes by dye-decolorizing peroxidase from Bacillus amyloliquefaciens.

    abstract:OBJECTIVE:The dye-decolorizing peroxidase from Bacillus amyloliquefaciens, BaDyP, was identified to be an efficient catalyst for the degradation of phenolic β-ether lignin model dimer guaiacylglycerol-β-guaiacyl ether (GGE) and dyes. RESULTS:Efeb gene encoding BaDyP from B. amyloliquefaciens MN-13 consisted of 1257 bp...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-019-02696-0

    authors: Yang J,Gao T,Zhang Y,Wang S,Li H,Li S,Wang S

    更新日期:2019-09-01 00:00:00

  • Recent advances in phosphate biosensors.

    abstract::A number of biosensors have been developed for phosphate analysis particularly, concerning its negative impact within the environmental and biological systems. Enzymatic biosensors comprising either a single or multiple enzymatic system have been extensively used for the direct and indirect analysis of phosphate ions....

    journal_title:Biotechnology letters

    pub_type: 杂志文章,评审

    doi:10.1007/s10529-015-1823-3

    authors: Upadhyay LS,Verma N

    更新日期:2015-07-01 00:00:00

  • Molecular cloning and characterization of the α-chain gene of goose immunoglobulin heavy chain.

    abstract::A novel gene encoding the α-chain of goose immunoglobulin heavy-chain (Igα) was cloned by reverse transcription-PCR. The cDNA had 1,760 bp and encompassed a partial V-D-J region of the heavy chain, a constant region (Cα) and 3'-untranslated region of α-chain. The Cα gene contains four constant region domains (CH1-CH4)...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-013-1415-z

    authors: Guo Y,Gao M,Luo X,Sheng Q,Ma B,Wang J

    更新日期:2014-04-01 00:00:00

  • 1,3-Propanediol production by Klebsiella pneumoniae under different aeration strategies.

    abstract::1,3-Propanediol production by Klebsiella pneumoniae was studied in batch cultures under N2 flow and four airflow systems. Different byproducts were formed under different aeration conditions. An anaerobic/aerobic combined fed-batch culture was developed giving 70 g 1,3-propanediol l(-1) and 16 g 2,3-butanediol l(-1) w...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1023/b:bile.0000025902.44458.f4

    authors: Cheng KK,Liu DH,Sun Y,Liu WB

    更新日期:2004-06-01 00:00:00

  • Applicability of Coriolopsis rigida for biodegradation of polycyclic aromatic hydrocarbons.

    abstract::Laccase was produced by Coriolopsis rigida using barley bran as substrate in solid-state fermentation (SSF) and also by submerged fermentation (SmF). The best results were obtained in SSF with twice the amount of laccase production. Laccase could be produced from repeated batch cultures of SSF over 30 days. The laccas...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-006-9039-1

    authors: Gómez J,Rodríguez Solar D,Pazos M,Sanromán MA

    更新日期:2006-07-01 00:00:00

  • A universal fixation method based on quaternary ammonium salts (RNAlater) for omics-technologies: Saccharomyces cerevisiae as a case study.

    abstract::Genomics, transcriptomics, proteomics and fluxomics are powerful omics-technologies that play a major role in today's research. For each of these techniques good sample quality is crucial. Major factors contributing to the quality of a sample is the actual sampling procedure itself and the way the sample is stored dir...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-013-1163-0

    authors: van Eijsden RG,Stassen C,Daenen L,Van Mulders SE,Bapat PM,Siewers V,Goossens KV,Nielsen J,Delvaux FR,Van Hummelen P,Devreese B,Willaert RG

    更新日期:2013-06-01 00:00:00

  • Biodegradation of polyvinyl alcohol by a brown-rot fungus, Fomitopsis pinicola.

    abstract::A brown-rot fungus, Fomitopsis pinicola, degraded polyvinyl alcohol (PVA) in quartz sand but not in liquid culture. From gel permeation chromatography analysis, the high-molecular-weight fraction of PVA was decreased by the action of F. pinicola but the coloration of the culture filtrate with I2 solution increased. Th...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-013-1281-8

    authors: Tsujiyama S,Okada A

    更新日期:2013-11-01 00:00:00

  • On-column refolding and purification of recombinant human interleukin-1 receptor antagonist (rHuIL-1ra) expressed as inclusion body in Escherichia coli.

    abstract::Recombinant human interleukin-1 receptor antagonist (rHuIL-1ra) was produced in E. coli as an inclusion body. rHuIL-1ra was purified to Over 98% purity by anion exchange chromatography after on-column refolding. The optimized processes produced more than 2 g pure refolded rHuIL-1ra per 1 l culture, corresponding to a ...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-005-8655-5

    authors: Tan H,Dan G,Gong H,Cao L

    更新日期:2005-08-01 00:00:00

  • Combinatorial evaluation of laccase-mediator system in the oxidation of veratryl alcohol.

    abstract::Laccases play an important role in the biological break down of lignin and have great potential in the deconstruction of lignocellulosic feedstocks. We examined 16 laccases, both commercially prepared and crude extracts, for their ability to oxidize veratryl alcohol in the presence of various solvents and mediators. S...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-012-1078-1

    authors: Larson TM,Anderson AM,Rich JO

    更新日期:2013-02-01 00:00:00

  • Therapeutic applications of CRISPR/Cas9 system in gene therapy.

    abstract::Gene therapy is based on the principle of the genetic manipulation of DNA or RNA for treating and preventing human diseases. The clustered regularly interspaced short palindromic repeats/CRISPR associated nuclease9 (CRISPR/Cas9) system, derived from the acquired immune system in bacteria and archaea, has provided a ne...

    journal_title:Biotechnology letters

    pub_type: 杂志文章,评审

    doi:10.1007/s10529-018-2555-y

    authors: Mollanoori H,Teimourian S

    更新日期:2018-06-01 00:00:00

  • Enzymatic synthesis of poly(ε-caprolactone) in monocationic and dicationic ionic liquids.

    abstract::Enzymatic polymerization can offer metal-free routes to polymer materials that could be used in biomedical applications. To take advantage of the unique properties of ionic liquids (ILs) for enzyme stability, monocationic ionic liquid (MIL) and dicationic ionic liquid (DIL) were used to promote the ring-opening polyme...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-013-1160-3

    authors: Wu C,Zhang Z,He F,Zhuo R

    更新日期:2013-06-01 00:00:00

  • Characterization of ribose-5-phosphate isomerase of Clostridium thermocellum producing D-allose from D-psicose.

    abstract::The rpiB gene, encoding ribose-5-phosphate isomerase (RpiB) from Clostridium thermocellum, was cloned and expressed in Escherichia coli. RpiB converted D-psicose into D-allose but it did not convert D-xylose, L-rhamnose, D-altrose or D-galactose. The production of D-allose by RpiB was maximal at pH 7.5 and 65 degrees ...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-007-9393-7

    authors: Park CS,Yeom SJ,Kim HJ,Lee SH,Lee JK,Kim SW,Oh DK

    更新日期:2007-09-01 00:00:00

  • Molecular and absorption properties of 12 soy isoflavones and their structure-activity relationship with selected biological activities.

    abstract::Three biological activities of 12 soy isoflavones were investigated in terms of the structure-activity relationship. Seven molecular descriptors and one absorption predictor were significantly related to the inhibition of cytochrome P4501 activity in HepG2 cells by soy isoflavones, yielding water solubility [correlati...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-005-8457-9

    authors: Chun HS,Chang HJ,Choi EH,Kim HJ,Ku KH

    更新日期:2005-08-01 00:00:00

  • 4-Vinylphenol production from glucose using recombinant Streptomyces mobaraense expressing a tyrosine ammonia lyase from Rhodobacter sphaeroides.

    abstract:OBJECTIVES:To find a novel host for the production of 4-vinylphenol (4VPh) by screening Streptomyces species. RESULTS:The conversion of p-coumaric acid (pHCA) to 4VPh in Streptomyces mobaraense was evaluated using a medium containing pHCA. S. mobaraense readily assimilated pHCA after 24 h of cultivation to produce 4VP...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-016-2126-z

    authors: Fujiwara R,Noda S,Kawai Y,Tanaka T,Kondo A

    更新日期:2016-09-01 00:00:00

  • Design and expression of oligomeric fibronectin fusion protein: a strategy for enhancing cell adhesion activity.

    abstract::Cell adhesion to extracellular matrices, including fibronectin, results in clustering of integrins in focal adhesions. To promote the clustering of fibronectin and thus enhance its activity at the sites of focal adhesion formation, we have engineered a fusion protein containing recombinant fibronectin fragment (hFN) c...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-005-6101-3

    authors: Chung CP,Jang JH

    更新日期:2005-06-01 00:00:00

  • Identification of glycolaldehyde as the key inhibitor of bioethanol fermentation by yeast and genome-wide analysis of its toxicity.

    abstract::Degradation of lignocellulose with pressurised hot water is an efficient method of bioethanol production. However, the resultant solution inhibits ethanol fermentation by Saccharomyces cerevisiae. Here, we first report that glycolaldehyde, which is formed when lignocellulose is treated with pressurised hot water, inhi...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-010-0437-z

    authors: Jayakody LN,Hayashi N,Kitagaki H

    更新日期:2011-02-01 00:00:00

  • Involvement of polyamines in plant response to abiotic stress.

    abstract::Environmental stresses are the major cause of crop loss worldwide. Polyamines are involved in plant stress responses. However, the precise role(s) of polyamine metabolism in these processes remain ill-defined. Transgenic approaches demonstrate that polyamines play essential roles in stress tolerance and open up the po...

    journal_title:Biotechnology letters

    pub_type: 杂志文章,评审

    doi:10.1007/s10529-006-9179-3

    authors: Alcázar R,Marco F,Cuevas JC,Patron M,Ferrando A,Carrasco P,Tiburcio AF,Altabella T

    更新日期:2006-12-01 00:00:00

  • Induction of endophytic colonization in rice (Oryza sativa L.) tissue culture plants by Azorhizobium caulinodans.

    abstract::Endophytic colonization in rice was induced using rhizobia. Dehusked seeds of rice hybrid, CORH2, were used as explants for induction of calli. MS medium was modified with 2,4-D (2.5 mg l(-1)) and kinetin (0.2 mg l(-1)) for callus induction. Well-developed calli were inoculated with Azorhizobium caulinodans strains OR...

    journal_title:Biotechnology letters

    pub_type: 杂志文章

    doi:10.1007/s10529-008-9693-6

    authors: Senthilkumar M,Madhaiyan M,Sundaram SP,Sangeetha H,Kannaiyan S

    更新日期:2008-08-01 00:00:00