Distributed biological computation with multicellular engineered networks.

Abstract:

:Ongoing efforts within synthetic and systems biology have been directed towards the building of artificial computational devices using engineered biological units as basic building blocks. Such efforts, inspired in the standard design of electronic circuits, are limited by the difficulties arising from wiring the basic computational units (logic gates) through the appropriate connections, each one to be implemented by a different molecule. Here, we show that there is a logically different form of implementing complex Boolean logic computations that reduces wiring constraints thanks to a redundant distribution of the desired output among engineered cells. A practical implementation is presented using a library of engineered yeast cells, which can be combined in multiple ways. Each construct defines a logic function and combining cells and their connections allow building more complex synthetic devices. As a proof of principle, we have implemented many logic functions by using just a few engineered cells. Of note, small modifications and combination of those cells allowed for implementing more complex circuits such as a multiplexer or a 1-bit adder with carry, showing the great potential for re-utilization of small parts of the circuit. Our results support the approach of using cellular consortia as an efficient way of engineering complex tasks not easily solvable using single-cell implementations.

journal_name

Nature

journal_title

Nature

authors

Regot S,Macia J,Conde N,Furukawa K,Kjellén J,Peeters T,Hohmann S,de Nadal E,Posas F,Solé R

doi

10.1038/nature09679

subject

Has Abstract

pub_date

2011-01-13 00:00:00

pages

207-11

issue

7329

eissn

0028-0836

issn

1476-4687

pii

nature09679

journal_volume

469

pub_type

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