Chromosomal localization of the human gene encoding c-myc promoter-binding protein (MPB1) to chromosome 1p35-pter.

Abstract:

:We report the mapping of the human gene MPB1 (c-myc promoter binding protein), a recently identified gene regulatory protein. MPB1 binds to the c-myc P2 promoter and exerts a negative regulatory role on c-myc transcription. Since exogenous expression from transfection of the MPB1 gene suppresses the tumorigenic property of breast cancer cells, there was interest in determining the chromosomal location of this gene. The human MPB1 gene was assigned to human chromosome 1p35-pter using Southern blot analyses of genomic DNAs from rodent-human somatic hybrid cell lines. A specific human genomic fragment was observed only in the somatic cell lines containing human chromosome 1 or the p35-pter region of the chromosome.

journal_name

Genomics

journal_title

Genomics

authors

White RA,Adkison LR,Dowler LL,Ray RB

doi

10.1006/geno.1996.4499

subject

Has Abstract

pub_date

1997-02-01 00:00:00

pages

406-8

issue

3

eissn

0888-7543

issn

1089-8646

pii

S0888-7543(96)94499-7

journal_volume

39

pub_type

杂志文章

相关文献

GENOMICS文献大全
  • Molecular cloning and characterization of a novel mouse epidermal differentiation gene and its promoter.

    abstract::The transcription factor E2F1 is an important regulator of cell proliferation, apoptosis, and differentiation. A novel mouse gene (Eig3) was originally identified as up-regulated in E2F1-overexpressing keratinocytes by the rapid analysis of gene expression technique. An apparently full-length cDNA and a 2.8-kb genomic...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2001.6518

    authors: Wang A,Johnson DG,MacLeod MC

    更新日期:2001-05-01 00:00:00

  • CLAN, a novel human CED-4-like gene.

    abstract::Proteins governing cell death form the basis of many normal processes and contribute to the pathogenesis of many diseases when dysregulated. Here we report the cloning of a novel human CED-4-like gene, CLAN, and several of its alternatively spliced isoforms. These caspase-associated recruitment domain (CARD)-containin...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2001.6579

    authors: Damiano JS,Stehlik C,Pio F,Godzik A,Reed JC

    更新日期:2001-07-01 00:00:00

  • Paralogy mapping: identification of a region in the human MHC triplicated onto human chromosomes 1 and 9 allows the prediction and isolation of novel PBX and NOTCH loci.

    abstract::The human genome contains a group of gene families whose members map within the same regions of chromosomes 1, 6, and 9. The number of gene families involved and their pronounced clustering to the same areas of the genome indicate that their mapping relationship is nonrandom. By combining mapping data and sequence inf...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0328

    authors: Katsanis N,Fitzgibbon J,Fisher EM

    更新日期:1996-07-01 00:00:00

  • Experimental and bioinformatic characterisation of the promoter region of the Marfan syndrome gene, FBN1.

    abstract::Mutations in the FBN1 gene, encoding the extracellular matrix protein fibrillin-1, result in the dominant connective tissue disease Marfan syndrome. Marfan syndrome has a variable phenotype, even within families carrying the same FBN1 mutation. Differences in gene expression resulting from sequence differences in the ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2009.06.005

    authors: Summers KM,Bokil NJ,Baisden JM,West MJ,Sweet MJ,Raggatt LJ,Hume DA

    更新日期:2009-10-01 00:00:00

  • Quantitative analysis of wobble splicing indicates that it is not tissue specific.

    abstract::Alternative splicing is an important mechanism mediating the function of genes in multicellular organisms. Recently, we discovered a new splicing-junction wobble mechanism that generates subtle alterations in mRNA by randomly selecting tandem 5' and 3' splicing-junction sites. Here we developed a sensitive approach to...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2006.07.004

    authors: Tsai KW,Lin WC

    更新日期:2006-12-01 00:00:00

  • Genomic features and copper biosorption potential of a new Alcanivorax sp. VBW004 isolated from the shallow hydrothermal vent (Azores, Portugal).

    abstract::A new Alcanivorax sp. VBW004 was isolated from a shallow hydrothermal vent in Azores Island, Portugal. In this study, we determined VBW004 was resistant to copper. This strain showed maximum tolerance of copper concentrations up to 600 μg/mL. Based on 16S rRNA gene sequencing and phylogeny revealed that this strain wa...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2020.06.015

    authors: Ramasamy KP,Rajasabapathy R,Lips I,Mohandass C,James RA

    更新日期:2020-09-01 00:00:00

  • Isolation and chromosomal localization of a novel FMS-like tyrosine kinase gene.

    abstract::We have isolated and sequenced part of a new gene of the tyrosine kinase family. This gene, called FLT3, has strong sequence similarities with members of a group of genes encoding growth factor receptors: FMS, KIT, and PDGFR. We have localized the human FLT3 gene to chromosome 13, band q12, and its mouse homolog to ch...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(91)90270-o

    authors: Rosnet O,Matteï MG,Marchetto S,Birnbaum D

    更新日期:1991-02-01 00:00:00

  • Cloning and characterization of FAM13A1--a gene near a milk protein QTL on BTA6: evidence for population-wide linkage disequilibrium in Israeli Holsteins.

    abstract::A cluster of genes coding for proteins of the extracellular matrix (ECM) containing sequence motifs essential for integrin-receptor interactions is located on HSA4q21 and on BTA6, within the critical region of a quantitative trait locus (QTL) affecting milk protein production. Genes within this cluster are involved in...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2004.03.005

    authors: Cohen M,Reichenstein M,Everts-van der Wind A,Heon-Lee J,Shani M,Lewin HA,Weller JI,Ron M,Seroussi E

    更新日期:2004-08-01 00:00:00

  • Genomic structure of the EWS gene and its relationship to EWSR1, a site of tumor-associated chromosome translocation.

    abstract::The EWS gene has been identified based on its location at the chromosome 22 breakpoint of the t(11;22)(q24;q12) translocation that characterizes Ewing sarcoma and related neuroectodermal tumors. The EWS gene spans about 40 kb of DNA and is encoded by 17 exons. The nucleotide sequence of the exons is identical to that ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(05)80363-5

    authors: Plougastel B,Zucman J,Peter M,Thomas G,Delattre O

    更新日期:1993-12-01 00:00:00

  • Physical mapping studies on the human X chromosome in the region Xq27-Xqter.

    abstract::We have characterized three terminal deletions of the long arm of the X chromosome. Southern analysis using Xq27/q28 probes suggests that two of the deletions have breakpoints near the fragile site at Xq27.3. Flow karyotype analysis provides an estimate of 12 X 10(6) bp for the size of the deleted region. We have not ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(87)90028-0

    authors: Patterson M,Schwartz C,Bell M,Sauer S,Hofker M,Trask B,van den Engh G,Davies KE

    更新日期:1987-12-01 00:00:00

  • Cloning of the genomic locus of mouse SH2 containing inositol 5-phosphatase (SHIP) and a novel 110-kDa splice isoform, SHIPdelta.

    abstract::The SH2 domain containing inositol 5'-phosphatase (SHIP) was initially described as a 145-kDa protein phosphorylated on tyrosines upon growth factor and cytokine stimulation. It was shown to be phosphorylated after Fc and B cell receptor activation and plays a role in negative signaling. Different isoforms of the SHIP...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2000.6324

    authors: Wolf I,Lucas DM,Algate PA,Rohrschneider LR

    更新日期:2000-10-01 00:00:00

  • Linked markers flanking the gene for multiple endocrine neoplasia type 2A.

    abstract::The inherited cancer syndrome multiple endocrine neoplasia type 2A (MEN2A) has recently been mapped to chromosome 10. We have typed 29 families with this disorder with DNA markers from the pericentromeric region of chromosome 10. Two markers, RBP3 and MCK2, were tightly linked to the MEN2A gene at recombination fracti...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(89)90046-3

    authors: Nakamura Y,Mathew CG,Sobol H,Easton DF,Telenius H,Bragg T,Chin K,Clark J,Jones C,Lenoir GM

    更新日期:1989-08-01 00:00:00

  • A substitution mutation in the myosin binding protein C gene in ragdoll hypertrophic cardiomyopathy.

    abstract::Familial hypertrophic cardiomyopathy (HCM) is a primary myocardial disease with a prevalence of 1 in 500 in human beings. Causative mutations have been identified in several sarcomeric genes, including the cardiac myosin binding protein C (MYBPC3) gene. Heritable HCM also exists in a large-animal model, the cat, and w...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2007.04.007

    authors: Meurs KM,Norgard MM,Ederer MM,Hendrix KP,Kittleson MD

    更新日期:2007-08-01 00:00:00

  • "Major minisatellite loci" detected by minisatellite clones 33.6 and 33.15 correspond to the cognate loci D1S111 and D7S437.

    abstract::G. Chimini et al. (1989, Genomics 5: 316-324) have recently reported that the two multilocus DNA fingerprinting probes 33.6 and 33.15 each detect a single major site in the human genome, at 1q23 and 7q35-q36, respectively, and speculate that these sites represent particularly large loci homologous to these probes. How...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(90)90183-u

    authors: Jeffreys AJ,MacLeod A,Neumann R,Povey S,Royle NJ

    更新日期:1990-07-01 00:00:00

  • Sequence context analysis in the mouse genome: single nucleotide polymorphisms and CpG island sequences.

    abstract::A genome-wide view of sequence mutability in mice is still limited, although biologists usually assume the same scenario for mice as for humans. In this study, we examined the sequence context in the local environment of 482,528 mouse single nucleotide polymorphisms (SNPs). We found that CpG-containing short sequences...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2005.09.012

    authors: Zhao Z,Zhang F

    更新日期:2006-01-01 00:00:00

  • Assignment of defensin gene(s) to human chromosome 8p23.

    abstract::A relatively abundant component of the polymorphonuclear leukocyte granulocytes has been recently isolated and called defensin. Defensins have antimicrobial activity against gram-positive and gram-negative bacteria and enveloped viruses. A cDNA insert for defensin HNP-1 (DEF1) has been used to map the gene(s) to human...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(89)90052-9

    authors: Sparkes RS,Kronenberg M,Heinzmann C,Daher KA,Klisak I,Ganz T,Mohandas T

    更新日期:1989-08-01 00:00:00

  • Syntenic assignments of visual transduction genes in cattle.

    abstract::To establish syntenic relationships of phototransduction genes, we have mapped the genes encoding the alpha-, beta-, and gamma-subunits of rod cGMP phosphodiesterase (PDE) (PDEA, PDEB, PDEG), the alpha'-subunit of cone PDE (PDEA2), and the rod cGMP-gated channel (CNCG) to bovine syntenic groups. The rod cGMP PDE alpha...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(05)80171-5

    authors: Gallagher DS Jr,Womack JE,Baehr W,Pittler SJ

    更新日期:1992-11-01 00:00:00

  • Developmental expression of p107 mRNA and evidence for alternative splicing of the p107 (RBL1) gene product.

    abstract::Expression of p107, a protein with homology to the retinoblastoma tumor suppressor (pRB), was monitored during murine development. Northern blot tissue surveys identified two transcripts of 4.9 and 2.4 kb that hybridized to a p107 cDNA clone. Expression of both transcripts was detected in fetal tissues, with particula...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.1184

    authors: Kim KK,Soonpaa MH,Wang H,Field LJ

    更新日期:1995-08-10 00:00:00

  • Structure of the gene for the testis-specific proprotein convertase 4 and of its alternate messenger RNA isoforms.

    abstract::Proprotein convertase 4 (PC4) is a mammalian secretory serine endoproteinase similar to the yeast KEX2 gene product and specifically expressed in testicular germs cells. PC4 mRNA isoforms that vary in size and 3' coding sequence have been reported (N. G. Seitah, R. Day, J. Hamelin, A. Gaspar, M. W. Collard, and M. Chr...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1158

    authors: Mbikay M,Raffin-Sanson ML,Tadros H,Sirois F,Seidah NG,Chretien M

    更新日期:1994-03-15 00:00:00

  • Solh, the mouse homologue of the Drosophila melanogaster small optic lobes gene: organization, chromosomal mapping, and localization of gene product to the olfactory bulb.

    abstract::The Drosophila melanogaster small optic lobes gene (sol) is required for normal development of the neuropiles of the medulla and lobula complexes of the adult optic lobes. The predicted protein products of sol and its human homologue SOLH contain zinc-finger-like repeats, a calpain-like protease domain, and a C-termin...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1999.6098

    authors: Kamei M,Webb GC,Heydon K,Hendry IA,Young IG,Campbell HD

    更新日期:2000-02-15 00:00:00

  • Chromosomal assignment of retinoic acid receptor (RAR) genes in the human, mouse, and rat genomes.

    abstract::The human genes encoding the alpha and beta forms of the retinoic acid receptor are known to be located on chromosomes 17 (band q21.1:RARA) and 3 (band p24:RARB). By in situ hybridization, we have now localized the gene for retinoic acid receptor gamma, RARG, on chromosome 12, band q13. We also mapped the three retino...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(91)90199-o

    authors: Mattei MG,Rivière M,Krust A,Ingvarsson S,Vennström B,Islam MQ,Levan G,Kautner P,Zelent A,Chambon P

    更新日期:1991-08-01 00:00:00

  • MetaCAA: A clustering-aided methodology for efficient assembly of metagenomic datasets.

    abstract::A key challenge in analyzing metagenomics data pertains to assembly of sequenced DNA fragments (i.e. reads) originating from various microbes in a given environmental sample. Several existing methodologies can assemble reads originating from a single genome. However, these methodologies cannot be applied for efficient...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2014.02.007

    authors: Reddy RM,Mohammed MH,Mande SS

    更新日期:2014-02-01 00:00:00

  • Temporal correlation between transcriptional changes and increased synthesis of hyaluronan in experimental cardiac hypertrophy.

    abstract::The role of hyaluronan in cardiac growth has become evident, previously shown by increased myocardial levels of hyaluronan in a rat model of cardiac hypertrophy. To further investigate the role of hyaluronan and regulation of its synthesis in cardiac hypertrophy, quantitative measurements of myocardial hyaluronan conc...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2010.04.003

    authors: Hellman U,Mörner S,Engström-Laurent A,Samuel JL,Waldenström A

    更新日期:2010-08-01 00:00:00

  • Exploring the multi-drug resistance in Escherichia coli O157:H7 by gene interaction network: A systems biology approach.

    abstract::In the present study, we have constructed an interaction network of 29 antibiotic resistant genes along with 777 interactions in E. coli O157:H7. Gene ontology analysis reveals that 94, 89 and 67 genes have roles in the cellular process, biological process and molecular function respectively. Gene complexes related to...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2018.06.002

    authors: Miryala SK,Ramaiah S

    更新日期:2019-07-01 00:00:00

  • Characterization of MAD2B and other mitotic spindle checkpoint genes.

    abstract::Aneuploidy is a characteristic of the majority of human cancers, and recent work has suggested that mitotic checkpoint defects play a role in its development. To further explore this issue, we isolated a novel human gene, MAD2B (MAD2L2), which is homologous to the spindle checkpoint gene MAD2 (MAD2L1). We determined t...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1999.5831

    authors: Cahill DP,da Costa LT,Carson-Walter EB,Kinzler KW,Vogelstein B,Lengauer C

    更新日期:1999-06-01 00:00:00

  • Molecular cloning and mapping of a human cDNA for cytosolic malate dehydrogenase (MDH1).

    abstract::We have isolated a human cDNA encoding a protein of 334 amino acids that shows 96% identity in amino acid sequence to murine cytosolic malate dehydrogenase. Heart and skeletal muscle expressed this gene most highly among the adult human tissues examined by Northern blot analysis. By fluorescence in situ hybridization,...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0087

    authors: Tanaka T,Inazawa J,Nakamura Y

    更新日期:1996-02-15 00:00:00

  • Rapid restriction mapping of cosmids by sequence-specific triple-helix-mediated affinity capture.

    abstract::A simple and rapid strategy for restriction mapping based on sequence-specific triple-helix affinity capture (TAC) was developed. The strategy was applied to the analysis of cosmid clones by the construction of a new cosmid vector, ScosTriplex-II, containing two different triple-helix-forming sequences flanking the cl...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0030

    authors: Ji H,Francisco T,Smith LM,Guilfoyle RA

    更新日期:1996-01-15 00:00:00

  • Rapid isolation of DNA probes within specific chromosome regions by interspersed repetitive sequence polymerase chain reaction.

    abstract::A method was recently developed for the specific amplification of human DNA sequences from interspecific somatic cell hybrids by the polymerase chain reaction (PCR) using primers directed to Alu, a short interspersed repeat element (SINE). We now show human-specific amplification using a primer to the 3' end of the hu...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(90)90477-c

    authors: Ledbetter SA,Nelson DL,Warren ST,Ledbetter DH

    更新日期:1990-03-01 00:00:00

  • Polymorphisms in lipogenic genes and milk fatty acid composition in Holstein dairy cattle.

    abstract::Changing bovine milk fatty acid (FA) composition through selection can decrease saturated FA (SFA) consumption, improve human health and provide a means for manipulating processing properties of milk. Our study determined associations between milk FA composition and genes from triacylglycerol (TAG) biosynthesis pathwa...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2014.10.001

    authors: Nafikov RA,Schoonmaker JP,Korn KT,Noack K,Garrick DJ,Koehler KJ,Minick-Bormann J,Reecy JM,Spurlock DE,Beitz DC

    更新日期:2014-12-01 00:00:00

  • Identification of a doublet missense substitution in the bovine LRP4 gene as a candidate causal mutation for syndactyly in Holstein cattle.

    abstract::Syndactyly in Holstein cattle is an autosomal recessive abnormality characterized by the fusion of the functional digits. This disorder has been previously mapped to the telomeric part of bovine chromosome 15. Here, we describe the fine-mapping of syndactyly in Holstein cattle to a 3.5-Mb critical interval using a com...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2006.05.007

    authors: Duchesne A,Gautier M,Chadi S,Grohs C,Floriot S,Gallard Y,Caste G,Ducos A,Eggen A

    更新日期:2006-11-01 00:00:00