Solh, the mouse homologue of the Drosophila melanogaster small optic lobes gene: organization, chromosomal mapping, and localization of gene product to the olfactory bulb.

Abstract:

:The Drosophila melanogaster small optic lobes gene (sol) is required for normal development of the neuropiles of the medulla and lobula complexes of the adult optic lobes. The predicted protein products of sol and its human homologue SOLH contain zinc-finger-like repeats, a calpain-like protease domain, and a C-terminal domain of unknown function. Long-distance PCR was used to amplify genomic DNA for Solh, the mouse homologue of sol, following the identification of mouse Solh expressed sequence tags. The nucleotide sequence of the Solh coding region (6.0 kb) was determined. The predicted Solh protein of 1095 amino acid residues shows 89% identity (93% similarity) to the human homologue. Solh was localized by in situ hybridization to band A3.3 on mouse Chromosome 17, in a region of maintained homology with human 16p13.3. Antipeptide antibodies were prepared and verified by demonstration of specific reactivity with recombinant human SOLH protein prepared by in vitro transcription/translation and expression in insect cells using the baculovirus system. The antibodies were used to show that the Solh protein localizes to the olfactory bulb in mouse and rat brain, suggesting that it could have an analogous role in development of sensory system neurons in Drosophila and in mammals.

journal_name

Genomics

journal_title

Genomics

authors

Kamei M,Webb GC,Heydon K,Hendry IA,Young IG,Campbell HD

doi

10.1006/geno.1999.6098

subject

Has Abstract

pub_date

2000-02-15 00:00:00

pages

82-9

issue

1

eissn

0888-7543

issn

1089-8646

pii

S0888-7543(99)96098-6

journal_volume

64

pub_type

杂志文章

相关文献

GENOMICS文献大全
  • Characterization of the genomic structure and expression of the mouse Apex2 gene.

    abstract::We isolated a mouse cDNA encoding APEX2 protein and demonstrated that APEX2 binds to PCNA. The level of Apex2 mRNA was high in the thymus, bone marrow, spleen, and kidney in adult mice. Apex2 consists of six exons and is flanked on the 3' end by Alas2 on X chromosome 63.0. Furthermore, Apex2 is flanked on the 5' end b...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(02)00009-5

    authors: Ide Y,Tsuchimoto D,Tominaga Y,Iwamoto Y,Nakabeppu Y

    更新日期:2003-01-01 00:00:00

  • Localization of 14 functional J regions in the human T-cell receptor alpha-chain locus.

    abstract::Nearly 60 unique J alpha regions have been identified in human T-cell receptor (TCR) alpha chains to date, yet fewer than one-third of these have been localized within the alpha-chain locus. We report a rapid method for the mapping of productively rearranged J alpha regions using oligonucleotide probes and overlapping...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1172

    authors: Harvey RC,Showe LC

    更新日期:1993-04-01 00:00:00

  • Genetic manipulations in crops: Challenges and opportunities.

    abstract::An alarming increase in the human population necessitates doubling the world food production in the next few decades. Although a number of possible biotechnological measures are under consideration, central to these efforts is the development of transgenic crops to produce more food, and the traits with which plants c...

    journal_title:Genomics

    pub_type: 杂志文章,评审

    doi:10.1016/j.ygeno.2017.07.007

    authors: Ahmad N,Mukhtar Z

    更新日期:2017-10-01 00:00:00

  • Defective repair of radiation-induced DNA damage is complemented by a CHORI-230-65K18 BAC clone on rat chromosome 4.

    abstract::The Long Evans cinnamon (LEC) rat is highly susceptible to X-irradiation due to defective DNA repair and is thus a model for hepatocellular carcinogenesis. We constructed a bacterial artificial chromosome (BAC) contig of rat chromosome 4 completely covering the region associated with radiation susceptibility. We used ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2005.09.020

    authors: Tsuji AB,Sugyo A,Sudo H,Sagara M,Ishikawa A,Ohtsuki M,Kimura T,Ogiu T,Miyagishi M,Taira K,Imai T,Harada YN

    更新日期:2006-02-01 00:00:00

  • Exonic SINE insertion in STK38L causes canine early retinal degeneration (erd).

    abstract::Fine mapping followed by candidate gene analysis of erd - a canine hereditary retinal degeneration characterized by aberrant photoreceptor development - established that the disease cosegregates with a SINE insertion in exon 4 of the canine STK38L/NDR2 gene. The mutation removes exon 4 from STK38L transcripts and is p...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2010.09.003

    authors: Goldstein O,Kukekova AV,Aguirre GD,Acland GM

    更新日期:2010-12-01 00:00:00

  • The 2p21 deletion syndrome: characterization of the transcription content.

    abstract::The vast majority of small-deletion syndromes are caused by haploinsufficiency of one or several genes and are transmitted as dominant traits. We have previously identified a homozygous deletion of 179,311 bp on chromosome 2p21 as the cause of a unique syndrome, inherited in a recessive mode, consisting of cystinuria,...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2005.04.001

    authors: Parvari R,Gonen Y,Alshafee I,Buriakovsky S,Regev K,Hershkovitz E

    更新日期:2005-08-01 00:00:00

  • Partial gene structure and assignment to chromosome 2q37 of the human inwardly rectifying K+ channel (Kir7.1) gene (KCNJ13).

    abstract::The novel weakly inward rectifying potassium channel Kir7.1 is a low-conductance channel that is predominantly expressed in epithelial cells. Here we describe a partial genomic characterization and the chromosomal assignment of the human Kir7.1 gene (KCNJ13). Analysis of the genomic structure using a PCR-based approac...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5598

    authors: Derst C,Döring F,Preisig-Müller R,Daut J,Karschin A,Jeck N,Weber S,Engel H,Grzeschik KH

    更新日期:1998-12-15 00:00:00

  • Human estrogen receptor-like 1 (ESRL1) gene: genomic organization, chromosomal localization, and promoter characterization.

    abstract::Estrogen receptor-like 1a (ESRL1a; same as estrogen receptor-related orphan receptors, ERR1) belongs to a subfamily of the nuclear receptor superfamily. We have previously shown that human ESRL1a modulates estrogen responsiveness of the lactoferrin gene promoter in transiently transfected endometrial carcinoma RL95-2 ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4850

    authors: Shi H,Shigeta H,Yang N,Fu K,O'Brian G,Teng CT

    更新日期:1997-08-15 00:00:00

  • Order and genomic distances among members of the carcinoembryonic antigen (CEA) gene family determined by fluorescence in situ hybridization.

    abstract::Fluorescence in situ hybridization was used to establish the order of, and to estimate genomic distances among, members of the carcinoembryonic antigen (CEA) and pregnancy-specific glycoprotein (PSG) subgroups on chromosome 19. Fluorescence in situ hybridization to metaphase chromosomes localized the PSG subgroup telo...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(92)90308-f

    authors: Brandriff BF,Gordon LA,Tynan KT,Olsen AS,Mohrenweiser HW,Fertitta A,Carrano AV,Trask BJ

    更新日期:1992-04-01 00:00:00

  • A 1-Mb physical map and PAC contig of the imprinted domain in 11p15.5 that contains TAPA1 and the BWSCR1/WT2 region.

    abstract::We have constructed a 1-Mb contig in human chromosomal band 11p15.5, a region implicated in the etiology of several embryonal tumors, including Wilms tumor, and in Beckwith-Wiedemann syndrome. Cosmid, P1, PAC, and BAC clones were characterized by NotI/SalI digestion and hybridized to a variety of probes to generate a ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4826

    authors: Reid LH,Davies C,Cooper PR,Crider-Miller SJ,Sait SN,Nowak NJ,Evans G,Stanbridge EJ,deJong P,Shows TB,Weissman BE,Higgins MJ

    更新日期:1997-08-01 00:00:00

  • Identification and characterization of circular RNA in lactating mammary glands from two breeds of sheep with different milk production profiles using RNA-Seq.

    abstract::CircRNA is a specific type of non-coding RNA that has been shown to have an important role in mammary gland (MG) activity, but no study of MG circRNA activity in sheep so far. In this study, the expression profile of circRNAs was investigated using RNA-Seq in MG parenchyma at peak lactation from Small-Tailed Han sheep...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2019.12.014

    authors: Hao Z,Zhou H,Hickford JGH,Gong H,Wang J,Hu J,Liu X,Li S,Zhao M,Luo Y

    更新日期:2020-05-01 00:00:00

  • The human homologue of the Drosophila tailless gene (TLX): characterization and mapping to a region of common deletion in human lymphoid leukemia on chromosome 6q21.

    abstract::Deletion of the long arm of chromosome 6 (6q) is one of the most common chromosomal abnormalities in human hematological malignancies. Two distinct regions of minimal deletion have been identified by loss of heterozygosity studies at 6q25 to 6q27 (RMD-1) and at 6q21 to 6q23 (RMD-2), suggesting the presence of one or m...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5270

    authors: Jackson A,Panayiotidis P,Foroni L

    更新日期:1998-05-15 00:00:00

  • Differential expansion of the N-formylpeptide receptor gene cluster in human and mouse.

    abstract::The human formylpeptide receptor (FPR) gene cluster has three members: FPR1 and FPRL1, which are expressed in neutrophils and monocytes and encode seven-transmembrane-domain chemotactic receptors specific for N-formylpeptides, and FPRL2, whose function is unknown. The FPRL1 receptor is also a lipoxin A4 receptor. Usin...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5376

    authors: Gao JL,Chen H,Filie JD,Kozak CA,Murphy PM

    更新日期:1998-07-15 00:00:00

  • A primary genetic map of the pericentromeric region of the human X chromosome.

    abstract::We report a genetic linkage map of the pericentromeric region of the human X chromosome, extending from Xp11 to Xq13. Genetic analysis with five polymorphic markers, including centromeric alpha satellite DNA, spanned a distance of approximately 38 cM. Significant lod scores were obtained with linkage analysis in 26 fa...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(88)90017-1

    authors: Mahtani MM,Willard HF

    更新日期:1988-05-01 00:00:00

  • Fourteen novel human members of mitochondrial solute carrier family 25 (SLC25) widely expressed in the central nervous system.

    abstract::Members of the solute carrier family 25 (SLC25) are known to transport molecules over the mitochondrial membrane. In this paper we present 14 novel members of SLC25 family in human. These were provided with following gene symbols by the HGNC: SLC25A32, SLC25A33, SLC25A34, SLC25A35, SLC25A37, SLC25A38, SLC25A39, SLC25A...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2006.06.016

    authors: Haitina T,Lindblom J,Renström T,Fredriksson R

    更新日期:2006-12-01 00:00:00

  • CLONEPLACER: a software tool for simulating contig formation for ordered shotgun sequencing.

    abstract::This communication describes a software tool that enables one to simulate large-scale regional mapping using an ordered shotgun sequencing approach. The analysis routines that are provided yield an estimate of the depth of coverage of the physical map, the largest contig formed, and the number of gaps remaining at any...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(95)80057-s

    authors: Singh GB,Krawetz SA

    更新日期:1995-01-20 00:00:00

  • Characterization of a new mRNA species from the human histamine N-methyltransferase gene.

    abstract::Histamine N-methyltransferase (HNMT), a cytosolic histamine-metabolizing enzyme, is the only known product of the 50-kb human HNMT. Here, a detailed investigation of HNMT products revealed the existence of a new brain mRNA product of HNMT. This species, named HNMT-Short (HNMT-S), encodes a 126-amino-acid protein. Nort...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(03)00236-2

    authors: Barnes WG,Grinde E,Crawford DR,Herrick-Davis K,Hough LB

    更新日期:2004-01-01 00:00:00

  • The human lamin B receptor/sterol reductase multigene family.

    abstract::LBR (lamin B receptor) is an integral protein of the inner nuclear membrane encoded by a gene on human chromosome 1q42.1. LBR has a nucleoplasmic, amino-terminal domain of approximately 200 amino acids followed by a carboxyl-terminal domain similar in sequence to yeast and plant sterol reductases. We have determined t...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5615

    authors: Holmer L,Pezhman A,Worman HJ

    更新日期:1998-12-15 00:00:00

  • DNA-methylation dependent regulation of embryo-specific 5S ribosomal DNA cluster transcription in adult tissues of sea urchin Paracentrotus lividus.

    abstract::We have previously reported a molecular and cytogenetic characterization of three different 5S rDNA clusters in the sea urchin Paracentrotus lividus and recently, demonstrated the presence of high heterogeneity in functional 5S rRNA. In this paper, we show some important distinctive data on 5S rRNA transcription for t...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2013.08.001

    authors: Bellavia D,Dimarco E,Naselli F,Caradonna F

    更新日期:2013-10-01 00:00:00

  • Neurturin, a novel neurotrophic factor, is localized to mouse chromosome 17 and human chromosome 19p13.3.

    abstract::Neurturin is a potent neurotrophic factor closely related to glial cell line-derived neurotrophic factor (GDNF, 40% amino acid sequence identity) and, like GDNF, can promote the survival of numerous neuronal populations including sympathetic, nodose, and dorsal root ganglion sensory neurons. Both neurturin and GDNF si...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4846

    authors: Heuckeroth RO,Kotzbauer P,Copeland NG,Gilbert DJ,Jenkins NA,Zimonjic DB,Popescu NC,Johnson EM Jr,Milbrandt J

    更新日期:1997-08-15 00:00:00

  • Characterization and chromosomal mapping of the gene encoding the cellular DNA binding protein ILF.

    abstract::Recently we isolated a cellular DNA binding protein, designated interleukin enhancer binding factor (ILF), that binds to purine-rich regulatory motifs in both the HIV-1 LTR and the IL2 promoter. Further analysis of the ILF gene reveals the existence of two mRNA species, both of which encode proteins containing the rec...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(92)90139-j

    authors: Li C,Lusis AJ,Sparkes R,Nirula A,Gaynor R

    更新日期:1992-07-01 00:00:00

  • Comparative transcriptome analysis of diploid and triploid hybrid groupers (Epinephelus coioides♀ × E. lanceolatus♂) reveals the mechanism of abnormal gonadal development in triploid hybrids.

    abstract::In our previous studies, diploid and triploid hybrids have been detected from the hybridization of Epinephelus coioides♀ × E. lanceolatus♂. The triploid groupers have been found to be delayed in gonadal development, but the mechanism remains poorly understood. In this study, we examined the gonadal development, assaye...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2018.11.010

    authors: Xiao L,Wang D,Guo Y,Tang Z,Liu Q,Li S,Zhang Y,Lin H

    更新日期:2019-05-01 00:00:00

  • Human type I pituitary adenylate cyclase activating polypeptide receptor (ADCYAP1R): localization to chromosome band 7p14 and integration into the cytogenetic, physical, and genetic map of chromosome 7.

    abstract::The gene encoding the human type I pituitary adenylate cyclase activating polypeptide receptor (ADCYAP1R1) was mapped to chromosome 7 by PCR analysis of genomic DNA from a human/rodent somatic cell hybrid mapping panel. This assignment was confirmed and the gene localized to chromosome band 7p14 by fluorescence in sit...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1560

    authors: Stoffel M,Espinosa R 3rd,Trabb JB,Le Beau MM,Bell GI

    更新日期:1994-10-01 00:00:00

  • Localized breakdown in linkage disequilibrium does not always predict sperm crossover hot spots in the human MHC class II region.

    abstract::To investigate the relationship between meiotic crossover hot spots and block-like linkage disequilibrium (LD), we have extended our high-resolution studies of the human MHC class II region to a 90-kb segment upstream of the HLA-DOA gene. LD blocks in this region are not as well defined as in the neighboring 210-kb DN...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2005.03.011

    authors: Kauppi L,Stumpf MP,Jeffreys AJ

    更新日期:2005-07-01 00:00:00

  • Construction of two YAC contigs in human Xp11.23-p11.22, one encompassing the loci OATL1, GATA, TFE3, and SYP, the other linking DXS255 to DXS146.

    abstract::We have constructed two YAC contigs in the Xp11.23-p11.22 interval of the human X chromosome, a region that was previously poorly characterized. One contig, of at least 1.4 Mb, links the pseudogene OATL1 to the genes GATA1, TFE3, and SYP and also contains loci implicated in Wiskott-Aldrich syndrome and synovial sarcom...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.9976

    authors: Fisher SE,Hatchwell E,Chand A,Ockenden N,Monaco AP,Craig IW

    更新日期:1995-09-20 00:00:00

  • Localization of eight additional genes in the human major histocompatibility complex, including the gene encoding the casein kinase II beta subunit (CSNK2B).

    abstract::A wide range of autoimmune and other diseases are known to be associated with the major histocompatibility complex. Many of these diseases are linked to the genes encoding the polymorphic histocompatibility antigens in the class I and class II regions, but some appear to be more strongly associated with genes in the c...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0459

    authors: Albertella MR,Jones H,Thomson W,Olavesen MG,Campbell RD

    更新日期:1996-09-01 00:00:00

  • Genome organization and polymorphism of the murine beta-glucuronidase region.

    abstract::Thirty-eight kilobases of mouse genomic DNA which surround and include the coding sequences for beta-glucuronidase has been mapped. Intron-exon arrangements were determined by hybridization of genomic sequences with cDNA clones, and minimum estimates of gene length (11-17 kb) and intron number were obtained. Only a si...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(88)90105-x

    authors: Moore KJ,Paigen K

    更新日期:1988-01-01 00:00:00

  • The L19 ribosomal protein gene (RPL19): gene organization, chromosomal mapping, and novel promoter region.

    abstract::The intron-containing genes encoding rat and human ribosomal protein L19 (RPL19) have been cloned. The DNA sequences of the entire rat RPL19 gene and the 5' end of the human RPL19 gene have been determined. Sequence comparison of corresponding regions of the two genes reveals a striking interspecies homology in the 5'...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(95)80036-l

    authors: Davies B,Fried M

    更新日期:1995-01-20 00:00:00

  • Pseudomonas putida modulates the expression of miRNAs and their target genes in response to drought and salt stresses in chickpea (Cicer arietinum L.).

    abstract::MicroRNAs are small non-coding regulatory RNA molecules that play an important role in the modulation of gene expression during various environmental stresses. Pseudomonas putida RA, a plant growth promoting rhizobacteria (PGPR) colonizes the root surface of plants improving their growth and development during abiotic...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2018.01.007

    authors: Jatan R,Chauhan PS,Lata C

    更新日期:2019-07-01 00:00:00

  • Characterization of a highly complex region in Xq13 and mapping of three isodicentric breakpoints associated with preleukemia.

    abstract::The chromosomal abnormality represented by an isodicentric X chromosome [idic(X)(q13)] is associated with a subset of acute myeloid leukemia (AML) and preleukemia observed in elderly females. A previous study localized the breakpoints of two acquired isodicentric X chromosomes associated with myelodysplasia to a 450-k...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2000.6128

    authors: McDonell N,Ramser J,Francis F,Vinet MC,Rider S,Sudbrak R,Riesselman L,Yaspo ML,Reinhardt R,Monaco AP,Ross F,Kahn A,Kearney L,Buckle V,Chelly J

    更新日期:2000-03-15 00:00:00