Abstract:
:The European cultivated potato, Solanum tuberosum subsp. tuberosum, has 6 related cultivated species and more than 200 wild relatives. In Solanum spp., studies of cytoplasmic organelles have been mainly confined to the plastid DNA composition of cultivated and wild species. In this study, 53 genotypes of 30 potato species belonging to the subsections Estolonifera and Potatoe, 2 tomato species, and a black nightshade genotype were examined using PCR markers to evaluate mitochondrial DNA diversity and assess whether mtDNA variability was correlated with series classification, geographical origin, ploidy, and endosperm balance number (EBN). The markers used revealed interspecific mtDNA variability in Solanum spp. and identified 13 different haplotypes. Intraspecific variability was also observed in a few species and genomic regions. Cluster analysis allowed arrangement of the 13 haplotypes into 7 subgroups, and statistical association tests showed significant relationships between mitochondrial patterns detected by molecular analysis and ploidy, EBN, and geographical origin. On the whole, the evolutionary patterns for the genomic regions analyzed reflected the species relationships established on the basis of morphological and molecular (nuclear and plastidial DNA) data. The mtDNA variability shown is also important for better characterization of genetic resources for potato breeding.
journal_name
Genomejournal_title
Genomeauthors
Scotti N,Cozzolino S,Cardi Tdoi
10.1139/g07-042subject
Has Abstractpub_date
2007-08-01 00:00:00pages
706-13issue
8eissn
0831-2796issn
1480-3321pii
g07-042journal_volume
50pub_type
杂志文章相关文献
GENOME文献大全abstract::We examined the sequence of a 2214 base pair HindIII fragment from the mitochondrial genome of six rainbow trout. The fragment encodes four proteins and two tRNAs. Sequences for two fish from a single locality were identical. Those from separate localities differed by from 1 to 7 nucleotide substitutions. Of 13 variab...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g90-003
更新日期:1990-02-01 00:00:00
abstract::Spermatocytes at meiotic metaphase I and anaphase I have a characteristic centromeric filament in a variety of vertebrate organisms. This centromeric filament was first demonstrated on mouse spermatocytes and its presence is now extended to spermatocytes from the human, rat, golden hamster, bull, and chicken. The visu...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g91-136
更新日期:1991-12-01 00:00:00
abstract::Carrot (Daucus carota L.) chromosomes are small and poorly differentiated in size and morphology. Here we demonstrate that fluorescent in situ hybridization (FISH) signals derived from arbitrary PCR probes can be used for chromosome identification in carrot. To prepare probes, we searched for nonpolymorphic products a...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g2012-003
更新日期:2012-03-01 00:00:00
abstract::Polymorphic expressed sequence tag - simple sequence repeat (EST-SSR) markers derived from major cereal crops were used to assess the genetic diversity of the USDA temperate bamboo collection consisting of 92 accessions classified in 11 separate genera and 44 species. A total of 211 bands were detected with a mean num...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g05-022
更新日期:2005-08-01 00:00:00
abstract::A novel population consisted of a set of 99 near isogenic lines (NILs) and backcross recombinant inbred lines (BCRILs) derived from a cross between the cultivated tomato Lycopersicon esculentum cv. E6206 and L. hirsutum accession LA1777 is presented. Most of the lines contain a single defined introgression from L. hir...
journal_title:Genome
pub_type: 杂志文章
doi:
更新日期:2000-10-01 00:00:00
abstract::Brucella spp., facultative intracellular pathogens that can persistently colonize animal host cells and cause zoonosis, affect public health and safety. A Brucella strain was isolated from yak in Qinghai Province. To detect whether this isolate could cause an outbreak of brucellosis and to reveal its genetic character...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/gen-2019-0101
更新日期:2020-08-01 00:00:00
abstract::The Mpv17l protein has two isoforms, M-LPL and M-LPS, which both regulate the production of reactive oxygen species (ROS) and protect against mitochondrial oxidative stress and apoptosis. M-LPL is ubiquitously expressed, while M-LPS is expressed mostly in the kidney of aged animals. We identified a variety of transcri...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g09-061
更新日期:2009-11-01 00:00:00
abstract::Genetic mechanisms of the incompatibility between Erysiphe graminis f.sp. secalis and wheat cultivars were analyzed using F1 hybrids between E. graminis f.sp. secalis, Sk-1, and f.sp. tritici, Tk-1. The avirulence of Sk-1 on Triticum aestivum 'Norin 4', 'Chinese Spring', and 'Kokeshi-komugi' was controlled by a single...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g94-108
更新日期:1994-10-01 00:00:00
abstract::The isolation, physical, and genetic mapping of a group of wheat genes expressed in infected heads of Triticum aestivum 'Frontana' resistant to Fusarium head blight is reported. A cDNA library was built from heads of 'Frontana' through suppressive subtractive hybridization, to enrich for sequences induced by the patho...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g04-098
更新日期:2005-02-01 00:00:00
abstract::In this study we sequenced and analysed the complete mitochondrial (mt) genome of the Chilean predatory mite Phytoseiulus persimilis Athias-Henriot (Chelicerata: Acari: Mesostigmata: Phytoseiidae: Amblyseiinae). The 16 199 bp genome (79.8% AT) contains the standard set of 13 protein-coding and 24 RNA genes. Compared w...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g10-004
更新日期:2010-04-01 00:00:00
abstract::Changes in chromosome number have played an important role in the evolution of the genus Trifolium. Along with a few species of polyploid origin there are several cases of dysploidy as evidenced by the presence of four basic chromosome numbers (x = 8, 7, 6, 5). Trifolium subterraneum and Trifolium israeliticum are rel...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/gen-2013-0055
更新日期:2013-06-01 00:00:00
abstract::Copines are evolutionarily conserved calcium-dependent membrane-binding proteins with potentially critical biological functions. In plants, the function of these proteins has not been analyzed except for in Arabidopsis thaliana where they play critical roles in development and disease resistance. To facilitate functio...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/gen-2016-0015
更新日期:2016-08-01 00:00:00
abstract::Environmental DNA (eDNA) is emerging as a potentially powerful tool for inferring species' presence, and hence occupancy, from DNA that is shed into environmental samples such as water. Although eDNA screening has been used to detect DNA from a variety of taxonomic groups, it has not yet been used to identify DNA from...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/gen-2015-0196
更新日期:2016-12-01 00:00:00
abstract::Gene segregation at six protein loci was analysed in progeny from tetraploid males and females obtained by suppression of first mitosis. The triploid full-sib families from five tetraploid males and the diploid gynogenetic lines from four tetraploid females were examined. The proportions of heterozygous gametes (0.83 ...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g88-092
更新日期:1988-08-01 00:00:00
abstract::Two periods of the development of genetic research in the USSR with reference to its current trends of plant and animal genetics, cytogenetics, and molecular genetics are reviewed. A short list of priority areas is established: the maintenance and use of unique gene pools of plants and animals; the domestication of an...
journal_title:Genome
pub_type: 历史文章,杂志文章
doi:10.1139/g89-160
更新日期:1989-01-01 00:00:00
abstract::We sequenced the complete mitochondrial (mt) genome of Camponotus atrox (Hymenoptera: Formicidae), which is only distributed in Korea. The genome was 16 540 bp in size and contained typical sets of genes (13 protein-coding genes, 22 tRNAs, and 2 rRNAs). The C. atrox A+T-rich region, at 1402 bp, was the longest of all ...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/gen-2015-0080
更新日期:2016-01-01 00:00:00
abstract::The superoxide dismutases (SODs) protect oxygen-using cells against reactive oxygen species, the potentially toxic by-products of respiration, oxidative metabolism, and radiation. We have previously shown that genetic disruption of CuZn SOD (SOD1) in Drosophila imparts a recessive phenotype of reduced lifespan, infert...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g04-083
更新日期:2004-12-01 00:00:00
abstract::Three wheat sequences, shown to be homologous to pollen allergen encoding, DNA replication regulating, and DNA (cytosine-5)-methyltransferase genes were localized on chromosomes using nullisomic-tetrasomic wheat ('Chinese Spring') and wheat-rye ('Chinese Spring'/'Imperial') addition lines. Whereas the loci for the pol...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g96-154
更新日期:1996-12-01 00:00:00
abstract::The wheat homoeologous Group 5 chromosomes were characterized physically in terms of rice linkage blocks using a deletion mapping approach. All three chromosomes, 5A, 5B, and 5D, were shown to have a similar structure, apart from the 4A-5A translocation on the distal end of chromosome arm 5AL. The physical mapping of ...
journal_title:Genome
pub_type: 杂志文章
doi:
更新日期:2000-02-01 00:00:00
abstract::To gain insights into the structure and function of the wheat (Triticum aestivum L.) genomes, we identified 278 ESTs related to abiotic stress (cold, heat, drought, salinity, and aluminum) from 7671 ESTs previously mapped to wheat chromosomes. Of the 278 abiotic stress related ESTs, 259 (811 loci) were assigned to chr...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g06-094
更新日期:2006-10-01 00:00:00
abstract::The spectrum of resistance to isolates of Leptosphaeria maculans and the map location of a new blackleg resistance gene found in the canola cultivar Brassica napus 'Surpass 400' are described. Two blackleg resistance genes, LepR1 and LepR2, from B. rapa subsp. sylvestris and introgressed in B. napus were identified pr...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g07-103
更新日期:2008-01-01 00:00:00
abstract::Light-harvesting-like (LIL) proteins are low-molecular-mass membrane proteins related to the light-harvesting complexes, which form the dominant antenna system in most photosynthetic eukaryotes. To analyze the LIL protein family, we mined a number of publicly available databases to identify members of this family in a...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g09-081
更新日期:2010-01-01 00:00:00
abstract::We have developed 21 new microsatellites in the model diploid perennial species Fragaria vesca from an enriched genomic library developed using F. vesca 'Ruegen'. The transferability of the primer pairs to other Fragaria species was high; all 31 primer pairs produced amplicons in 3 accessions of the octoploid strawber...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g03-142
更新日期:2004-06-01 00:00:00
abstract::In order to map the genes conditioning the induction of embryos during our anther culture process, we evaluated F2 plants from three different crosses for their anther culture ability and also performed RFLP analysis on these plants. The results showed that six chromosomal regions appear to be associated with the abil...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g95-127
更新日期:1995-10-01 00:00:00
abstract::Genomics is both data and compute intensive discipline. The success of genomics depends on adequate informatics infrastructure that can address growing data demands and enable a diverse range of resource-intensive computational activities. Designing a suitable Infrastructure is a challenging task, and its success larg...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/gen-2020-0096
更新日期:2020-11-20 00:00:00
abstract::A new repetitive sequence that is extremely abundant and well dispersed in the Thinopyrum elongatum genome but present in low-copy number in wheat (Triticum aestivum L.) has been isolated. This repeat and a Th. elongatum repeat isolated in another laboratory were used to identify cosmid genomic clones containing the r...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g94-012
更新日期:1994-02-01 00:00:00
abstract::The RFLP locus Xglk605 identified by the probe Tag605 maps to a proximal position on the long arm of wheat chromosome 2B about 7 cM away from a gene conditioning resistance to cereal cyst nematode in the wheat line AUS10894. The clone Tag605 was partially sequenced and the PCR primer set AWP1 was designed. The 292-bp ...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g96-100
更新日期:1996-08-01 00:00:00
abstract::Ribosomal intergenic spacers (IGSs) of Odontophrynus americanus 2n and 4n were cloned, restriction mapped, and partially sequenced. Three distinct regions, namely alpha, beta, and delta, were identified in the IGSs. The alpha and beta regions flanked the 28S and 18S rRNA genes, respectively, conserving an identical re...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g01-134
更新日期:2002-02-01 00:00:00
abstract::The use of consensus chloroplast microsatellites primers for dicotyledonous chloroplast genomes revealed the existence of intra and interspecific length variation within the genus Vitis. Three chloroplast microsatellite loci were found to be polymorphic in samples of Vitis vinifera, Vitis berlandieri, Vitis riparia, a...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g02-087
更新日期:2002-12-01 00:00:00
abstract::A recent investigation, using a human genomic probe, has indicated that the 68,000 dalton neurofilament gene (NF68) is on the short arm of chromosome 8. We have used a murine cDNA probe on 65 metaphase spreads in situ to localize the human NF68 gene to 8p21 (20/370 grains; p less than 0.0001). In addition, we have fou...
journal_title:Genome
pub_type: 杂志文章
doi:10.1139/g88-083
更新日期:1988-08-01 00:00:00