User Centric Genomics Infrastructure: trends and technologies.

abstract：:Elymus L. is the largest and most complex genus in the Triticeae tribe of grasses with approximately 150 polyploid perennial species occurring worldwide. We report here the first genetic linkage map for Elymus. Backcross mapping populations were created by crossing caespitose Elymus wawawaiensis (EW) (Snake River whea...

journal_title：Genome

authors： Mott IW,Larson SR,Jones TA,Robins JG,Jensen KB,Peel MD

更新日期：2011-10-01 00:00:00

abstract：:Electron microscopic examination of gonads of Drosophila melanogaster with different genotypes, including a metafemale 3X;2A and an intersex XXY;3A have revealed that the formation of synaptonemal complexes is controlled by the genic balance, i.e., the ratio of X chromosomes to autosomes. The Y chromosome is not invol...

journal_title：Genome

authors： Grishayeva TM,Bogdanov YF

更新日期：1988-04-01 00:00:00

abstract：:The theory of pivotal-differential evolution states that one genome of polyploid wheats remains stable (i.e., pivotal) during evolution, while the other genome or genomes may become modified (i.e., differential). A proposed mechanism for apparent modification of the differential genome is that different polyploid spec...

journal_title：Genome

authors： Chee PW,Lavin M,Talbert LE

更新日期：1995-04-01 00:00:00

abstract：:The evolution of karyotypically stabilized short-lived (SL) and long-lived (LL) cytoraces in the laboratory have been established and validated through our previous lifespan studies. In the present investigation, we examined the possible reason(s) for the differential longevity among selected members of SL and LL cyto...

journal_title：Genome

authors： Ranjini MS,Hosamani R,Muralidhara,Ramachandra NB

更新日期：2011-10-01 00:00:00

abstract：:Using pseudomolecules of assembled genomic sequence, we computed the frequencies of 6 to 24 bp oligonucleotide (oligo) "words" across the genome of rice (Oryza sativa L. subsp. japonica). All oligos of 10 or fewer basepairs were repeated at least 12 times in the genome. The percentage of unique (non-repeated) oligos r...

journal_title：Genome

authors： Liu S,Tinker NA,Mather DE

更新日期：2006-08-01 00:00:00

abstract：:A previous study of 100 karyotyped metaphase cells has demonstrated the utility of a graphic arts tool in deriving chromosome measurements for relative length determination. In the present study we utilize this same approach to address the question: "What are the average differences in relative lengths between apparen...

journal_title：Genome

authors： Mark HF,Wyandt HE,Pan T,Mark R Jr,Paramenter M,Campbell W,Mark Y

更新日期：1993-10-01 00:00:00

abstract：:We examined the sequence of a 2214 base pair HindIII fragment from the mitochondrial genome of six rainbow trout. The fragment encodes four proteins and two tRNAs. Sequences for two fish from a single locality were identical. Those from separate localities differed by from 1 to 7 nucleotide substitutions. Of 13 variab...

journal_title：Genome

authors： Beckenbach AT,Thomas WK,Sohrabi H

更新日期：1990-02-01 00:00:00

abstract：:Powdery mildew (caused by Microsphaera diffusa Cooke & Peck) is a common disease of soybean in many soybean-growing regions of the world and under greenhouse conditions. The previously reported Rmd locus of soybean for resistance to powdery mildew was mapped on soybean molecular linkage group J (chromosome 16). We hav...

journal_title：Genome

authors： Kang ST,Mian MA

更新日期：2010-05-01 00:00:00

abstract：:The length variability of the nontranscribed spacer (NTS) of the 5S rDNA repeats was analyzed in species of the genus Lens by means of PCR amplification. The NTS ranged from approximately 227 to approximately 952 bp. The polymorphism detected was higher than previous NTS polymorphisms described in this genus. Three NT...

journal_title：Genome

authors： Fernández M,Ruiz ML,Linares C,Fominaya A,Pérez de la Vega M

更新日期：2005-10-01 00:00:00

abstract：:Aegilops is a genus belonging to the family Poaceace, which have played an indispensible role in the evolution of bread wheat and continues to do so by transferring genes by wide hybridization. Being the secondary gene pool of wheat, gene transfer from Aegilops poses difficulties and segregation distortion is common. ...

journal_title：Genome

authors： Niranjana M

更新日期：2017-08-01 00:00:00

abstract：:5S rDNA loci have been mapped on barley chromosomes by in situ hybridization using five reciprocal translocation lines. Two kinds of DNA probes covering either the 5S rDNA coding region or the 5S rDNA coding and flanking noncoding regions were used. They were prepared by direct cloning from interphase nuclei and simul...

journal_title：Genome

authors： Fukui K,Kamisugi Y,Sakai F

更新日期：1994-02-01 00:00:00

abstract：:Light-harvesting-like (LIL) proteins are low-molecular-mass membrane proteins related to the light-harvesting complexes, which form the dominant antenna system in most photosynthetic eukaryotes. To analyze the LIL protein family, we mined a number of publicly available databases to identify members of this family in a...

journal_title：Genome

authors： Neilson JA,Durnford DG

更新日期：2010-01-01 00:00:00

abstract：:Three wheat sequences, shown to be homologous to pollen allergen encoding, DNA replication regulating, and DNA (cytosine-5)-methyltransferase genes were localized on chromosomes using nullisomic-tetrasomic wheat ('Chinese Spring') and wheat-rye ('Chinese Spring'/'Imperial') addition lines. Whereas the loci for the pol...

journal_title：Genome

authors： Korzun V,Balzer HJ,Balzer A,Bäumlein H,Börner A

更新日期：1996-12-01 00:00:00

abstract：:Twenty-nine lines with deletions in the Lr19 ('Indis') translocated chromosome segment were used to physically map three Thinopyrum RFLP loci as well as the Sr25 and Sd1 loci. From the data, the relative locations of marker loci on the translocation were determined as: Sd1, Xpsr165, Xpsr105, Xps129, Lr19, Wsp-D1, Sr25...

journal_title：Genome

authors： Prins R,Marais GF,Marais AS,Janse BJ,Pretorius ZA

更新日期：1996-10-01 00:00:00

abstract：:Brachypodium distachyon has been proposed as a model plant for agriculturally important cereal crops such as wheat and barley. Seed coat colour change from brown-red to yellow was observed in a mutant line (142-3) of B. distachyon, which was induced by chronic gamma radiation. In addition, dwarf phenotypes were observ...

journal_title：Genome

authors： Lee MB,Kim DY,Seo YW

更新日期：2017-07-01 00:00:00

abstract：:A Robertsonian polymorphism resulting in diploid chromosome number ranging from 59 to 61 and constant chromosome arm number (fundamental number = 104) was observed in the albino rainbow trout (Oncorhynchus mykiss (Walbaum)) from the yellow color strain. In one individual, 90 mitotic chromosomes and 156 chromosome arms...

journal_title：Genome

authors： Ocalewicz K,Dobosz S

更新日期：2009-04-01 00:00:00

abstract：:Bacteria are essential components of natural environments. They contribute to ecosystem functioning through roles as mutualists and pathogens for larger species, and as key components of food webs and nutrient cycles. Bacterial communities respond to environmental disturbances, and the tracking of these communities ac...

journal_title：Genome

authors： Farrell MJ,Govender D,Hajibabaei M,van der Bank M,Davies TJ

更新日期：2019-03-01 00:00:00

abstract：:For molecular and cytogenetic studies, two partial bacterial artificial chromosome (BAC) libraries of the garlic cultivar Allium sativum L. 'Danyang' were constructed using high molecular weight (HMW) garlic DNA, the pBAC1-SACB1 vector, and the pIndigoBAC536 vector. The average insert size of the BAC library was about...

journal_title：Genome

authors： Lee HR,Eom EM,Lim YP,Bang JW,Lee DH

更新日期：2003-06-01 00:00:00

abstract：:Unequal utilization of synonymous codons is a well-known phenomenon among living organisms. This phenomenon plays a major role in the enhancement of the accuracy and efficiency of translation. Gymnosperms are rarely paid attention in this aspect. Understanding the degree of and determining the forces influencing codon...

journal_title：Genome

authors： Majeed A,Kaur H,Bhardwaj P

更新日期：2020-04-01 00:00:00

abstract：:A number of Triticeae species were tested for tiller production, shoot dry matter production, and root penetration in waterlogged soil, and Thinopyrum elongatum and Elytrigia repens were shown to have better tolerance than wheat using these criteria. Tests of a number of wheat-alien amphiploids showed that there was a...

journal_title：Genome

authors： Taeb M,Koebner RM,Forster BP

更新日期：1993-10-01 00:00:00

abstract：:Fusarium head blight (FHB) is one of the most important fungal wheat diseases worldwide. Understanding the genetics of FHB resistance is the key to facilitating the introgression of different FHB resistance genes into adapted wheat. The objectives of the present study were to detect and map quantitative trait loci (QT...

journal_title：Genome

authors： Yang Z,Gilbert J,Fedak G,Somers DJ

更新日期：2005-04-01 00:00:00

abstract：:Unisexual Ambystoma are the oldest known unisexual vertebrates and comprise a lineage of eastern North American all female salamanders that reproduce by stealing sperm from as many as five normally bisexual congeneric species. The sperm may be used to only stimulate egg development by gynogenesis but can be incorporat...

journal_title：Genome

authors： Bogart JP

更新日期：2019-08-01 00:00:00

abstract：:Septoria speckled leaf blotch (SSLB), caused by Septoria passerinii, is one of the most important foliar diseases of barley (Hordeum vulgare L.) in North America. The primary problem caused by this disease is substantial yield loss. The objective of this study was to determine the chromosomal location of SSLB resistan...

journal_title：Genome

authors： Yu GT,Franckowiak JD,Lee SH,Horsley RD,Neate SM

更新日期：2010-08-01 00:00:00

abstract：:The genomic content of the subtelomeric repeated sequences Spelt1 and Spelt52 was studied by dot, Southern, and in situ hybridization in 11 newly synthesized amphiploids of Aegilops and Triticum, and data were compared with the parental plants. Spelt1 had reduced copy numbers in the first generation of three synthetic...

journal_title：Genome

authors： Salina EA,Numerova OM,Ozkan H,Feldman M

更新日期：2004-10-01 00:00:00

abstract：:We have used immunocytochemistry and molecular cloning methods to identify and characterize structural polypeptides of the centromere. These studies permit us to resolve two distinct regions: the inner and outer centromere. (i) Components of the outer centromere: autoantibodies from certain patients with rheumatic dis...

journal_title：Genome

authors： Earnshaw WC,Cooke CA

更新日期：1989-01-01 00:00:00

abstract：:Cadmium (Cd) is a nonessential heavy metal that is highly toxic to living cells at very low concentrations. Most of the Cd in plants derives from soils. Owing to the large amounts consumed, cereals are the major source of dietary Cd, and Cd content in oat can exceed accepted limits. Plants have a set of mechanisms tha...

journal_title：Genome

authors： Tanhuanpää P,Kalendar R,Schulman AH,Kiviharju E

更新日期：2007-06-01 00:00:00

abstract：:Striga gesnerioides is a root hemiparasite that primarily parasitizes dicotyledonous species, including cowpea (Vigna unguiculata L.) and other legumes. Based on the differential resistance response of various cultivars, landraces, and breeding lines, it has been proposed that several distinct races of cowpea-parasiti...

journal_title：Genome

authors： Botanga CJ,Timko MP

更新日期：2006-11-01 00:00:00

abstract：:The first SSR-based genetic linkage map of Cucurbita moschata was created by integrating the maps of two F2 populations with one common parent developed from the crosses Waltham Butternut (WB) x Nigerian Local (NL) and ZHOU (a hull-less type) x WB. The integrated C. moschata map comprises 205 SSR markers and two morph...

journal_title：Genome

authors： Gong L,Pachner M,Kalai K,Lelley T

更新日期：2008-11-01 00:00:00

abstract：:Carrot (Daucus carota L.) chromosomes are small and poorly differentiated in size and morphology. Here we demonstrate that fluorescent in situ hybridization (FISH) signals derived from arbitrary PCR probes can be used for chromosome identification in carrot. To prepare probes, we searched for nonpolymorphic products a...

journal_title：Genome

authors： Nowicka A,Grzebelus E,Grzebelus D

更新日期：2012-03-01 00:00:00

abstract：:Owing to its high nutritive, economic, and medicinal values, Akebia trifoliata has received increased attention, making worthy of being used as a new fruit crop for further domestication and commercialization in China. However, molecular research of A. trifoliata has lagged as investigations of its genomic resources a...

journal_title：Genome

authors： Niu J,Wang Y,Shi Y,Wang X,Sun Z,Huang K,Gong C,Luan M,Chen J

更新日期：2019-12-01 00:00:00