Microbial Base Editing: A Powerful Emerging Technology for Microbial Genome Engineering.

Abstract:

:Genome engineering is crucial for answering fundamental questions about, and exploring practical applications of, microorganisms. Various microbial genome-engineering tools, including CRISPR/Cas-enhanced homologous recombination (HR), have been developed, with ever-improving simplicity, efficiency, and applicability. Recently, a powerful emerging technology based on CRISPR/Cas-nucleobase deaminase fusions, known as base editing, opened new avenues for microbial genome engineering. Base editing enables nucleotide transition without inducing lethal double-stranded (ds)DNA cleavage, adding foreign donor DNA, or depending on inefficient HR. Here, we review ongoing efforts to develop and apply base editing to engineer industrially and clinically relevant microorganisms. We also summarize bioinformatics tools that would greatly facilitate guide (g)RNA design and sequencing data analysis and discuss the future challenges and prospects associated with this technology.

journal_name

Trends Biotechnol

journal_title

Trends in biotechnology

authors

Wang Y,Liu Y,Zheng P,Sun J,Wang M

doi

10.1016/j.tibtech.2020.06.010

subject

Has Abstract

pub_date

2021-02-01 00:00:00

pages

165-180

issue

2

eissn

0167-7799

issn

1879-3096

pii

S0167-7799(20)30174-8

journal_volume

39

pub_type

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