Commensal Bacteroides species induce colitis in host-genotype-specific fashion in a mouse model of inflammatory bowel disease.

Abstract:

:The intestinal microbiota is important for induction of inflammatory bowel disease (IBD). IBD is associated with complex shifts in microbiota composition, but it is unclear whether specific bacterial subsets induce IBD and, if so, whether their proportions in the microbiota are altered during disease. Here, we fulfilled Koch's postulates in host-genotype-specific fashion using a mouse model of IBD with human-relevant disease-susceptibility mutations. From screening experiments we isolated common commensal Bacteroides species, introduced them into antibiotic-pretreated mice, and quantitatively reisolated them in culture. The bacteria colonized IBD-susceptible and -nonsusceptible mice equivalently, but induced disease exclusively in susceptible animals. Conversely, commensal Enterobacteriaceae were >100-fold enriched during spontaneous disease, but an Enterobacteriaceae isolate failed to induce disease in antibiotic-pretreated mice despite robust colonization. We thus demonstrate that IBD-associated microbiota alterations do not necessarily reflect underlying disease etiology. These findings establish important experimental criteria and a conceptual framework for understanding microbial contributions to IBD.

journal_name

Cell Host Microbe

journal_title

Cell host & microbe

authors

Bloom SM,Bijanki VN,Nava GM,Sun L,Malvin NP,Donermeyer DL,Dunne WM Jr,Allen PM,Stappenbeck TS

doi

10.1016/j.chom.2011.04.009

subject

Has Abstract

pub_date

2011-05-19 00:00:00

pages

390-403

issue

5

eissn

1931-3128

issn

1934-6069

pii

S1931-3128(11)00131-4

journal_volume

9

pub_type

杂志文章
  • Conformational Plasticity in the HIV-1 Fusion Peptide Facilitates Recognition by Broadly Neutralizing Antibodies.

    abstract::The fusion peptide (FP) of HIV-1 envelope glycoprotein (Env) is essential for mediating viral entry. Detection of broadly neutralizing antibodies (bnAbs) that interact with the FP has revealed it as a site of vulnerability. We delineate X-ray and cryo-electron microscopy (cryo-EM) structures of bnAb ACS202, from an HI...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2019.04.011

    authors: Yuan M,Cottrell CA,Ozorowski G,van Gils MJ,Kumar S,Wu NC,Sarkar A,Torres JL,de Val N,Copps J,Moore JP,Sanders RW,Ward AB,Wilson IA

    更新日期:2019-06-12 00:00:00

  • A Connective Tissue Mast-Cell-Specific Receptor Detects Bacterial Quorum-Sensing Molecules and Mediates Antibacterial Immunity.

    abstract::Quorum-sensing molecules (QSMs) are secreted by bacteria to signal population density. Upon reaching a critical concentration, QSMs induce transcriptional alterations in bacteria, which enable virulence factor expression and biofilm formation. It is unclear whether mammalian hosts can recognize QSMs to trigger respons...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2019.06.003

    authors: Pundir P,Liu R,Vasavda C,Serhan N,Limjunyawong N,Yee R,Zhan Y,Dong X,Wu X,Zhang Y,Snyder SH,Gaudenzio N,Vidal JE,Dong X

    更新日期:2019-07-10 00:00:00

  • Shigella phagocytic vacuolar membrane remnants participate in the cellular response to pathogen invasion and are regulated by autophagy.

    abstract::Intracellular pathogens like Shigella flexneri enter host cells by phagocytosis. Once inside, the pathogen breaks the vacuolar membrane for cytosolic access. The fate and function of the vacuolar membrane remnants are not clear. Examining Shigella-infected nonmyeloid cells, we observed that proteins associated with va...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2009.07.005

    authors: Dupont N,Lacas-Gervais S,Bertout J,Paz I,Freche B,Van Nhieu GT,van der Goot FG,Sansonetti PJ,Lafont F

    更新日期:2009-08-20 00:00:00

  • Keeping viruses in Chk: DNA damage signaling puts the brakes on transformation.

    abstract::Oncogenic viruses infect many cells but rarely lead to tumorigenesis. In this issue of Cell Host & Microbe, Nikitin et al. describe how a protective DNA damage response acts to suppress transformation in the majority of cells latently infected with Epstein-Barr virus (EBV). ...

    journal_title:Cell host & microbe

    pub_type: 评论,杂志文章

    doi:10.1016/j.chom.2010.11.010

    authors: Lilley CE,Weitzman MD

    更新日期:2010-12-16 00:00:00

  • HCV Broadly Neutralizing Antibodies Use a CDRH3 Disulfide Motif to Recognize an E2 Glycoprotein Site that Can Be Targeted for Vaccine Design.

    abstract::Hepatitis C virus (HCV) vaccine efforts are hampered by the extensive genetic diversity of HCV envelope glycoproteins E1 and E2. Structures of broadly neutralizing antibodies (bNAbs) (e.g., HEPC3, HEPC74) isolated from individuals who spontaneously cleared HCV infection facilitate immunogen design to elicit antibodies...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2018.10.009

    authors: Flyak AI,Ruiz S,Colbert MD,Luong T,Crowe JE Jr,Bailey JR,Bjorkman PJ

    更新日期:2018-11-14 00:00:00

  • Microbial-derived butyrate: an oncometabolite or tumor-suppressive metabolite?

    abstract::Dietary factors, microbial composition, and metabolism are intimately intertwined into a complex network whose activities influence important intestinal functions. In a recent issue of Cell, Belcheva et al. (2014) show that microbial-derived butyrate promotes proliferation of cancer-initiated intestinal epithelial cel...

    journal_title:Cell host & microbe

    pub_type: 评论,杂志文章

    doi:10.1016/j.chom.2014.07.011

    authors: Bultman SJ,Jobin C

    更新日期:2014-08-13 00:00:00

  • Transmission stages dominate trypanosome within-host dynamics during chronic infections.

    abstract::Sleeping sickness is characterized by waves of the extracellular parasite Trypanosoma brucei in host blood, with infections continuing for months or years until inevitable host death. These waves reflect the dynamic conflict between the outgrowth of a succession of parasite antigenic variants and their control by the ...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2011.03.013

    authors: MacGregor P,Savill NJ,Hall D,Matthews KR

    更新日期:2011-04-21 00:00:00

  • A PfRH5-based vaccine is efficacious against heterologous strain blood-stage Plasmodium falciparum infection in aotus monkeys.

    abstract::Antigenic diversity has posed a critical barrier to vaccine development against the pathogenic blood-stage infection of the human malaria parasite Plasmodium falciparum. To date, only strain-specific protection has been reported by trials of such vaccines in nonhuman primates. We recently showed that P. falciparum ret...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2014.11.017

    authors: Douglas AD,Baldeviano GC,Lucas CM,Lugo-Roman LA,Crosnier C,Bartholdson SJ,Diouf A,Miura K,Lambert LE,Ventocilla JA,Leiva KP,Milne KH,Illingworth JJ,Spencer AJ,Hjerrild KA,Alanine DG,Turner AV,Moorhead JT,Edgel KA,Wu

    更新日期:2015-01-14 00:00:00

  • Prevotella as a Hub for Vaginal Microbiota under the Influence of Host Genetics and Their Association with Obesity.

    abstract::While the vaginal ecosystem is maintained through mutualistic relationships between the host and the vaginal bacteria, the effect of host genetics on the vaginal microbiota has not been well characterized. We examined the heritability of vaginal microbiota and its association with obesity in 542 Korean females, includ...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2016.11.010

    authors: Si J,You HJ,Yu J,Sung J,Ko G

    更新日期:2017-01-11 00:00:00

  • Transient inability to manage proteobacteria promotes chronic gut inflammation in TLR5-deficient mice.

    abstract::Colitis results from breakdown of homeostasis between intestinal microbiota and the mucosal immune system, with both environmental and genetic influencing factors. Flagellin receptor TLR5-deficient mice (T5KO) display elevated intestinal proinflammatory gene expression and colitis with incomplete penetrance, providing...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2012.07.004

    authors: Carvalho FA,Koren O,Goodrich JK,Johansson ME,Nalbantoglu I,Aitken JD,Su Y,Chassaing B,Walters WA,González A,Clemente JC,Cullender TC,Barnich N,Darfeuille-Michaud A,Vijay-Kumar M,Knight R,Ley RE,Gewirtz AT

    更新日期:2012-08-16 00:00:00

  • Mammalian PGRPs also mind the fort.

    abstract::Peptidoglycan recognition proteins (PGRPs or Pglyrps) regulate antibacterial responses in Drosophila, yet their functions in humans remain unclear. In this issue of Cell Host & Microbe, Saha and colleagues report that mammalian PGRPs can prevent aberrant interferon-gamma--induced inflammatory damage in vivo by modulat...

    journal_title:Cell host & microbe

    pub_type: 评论,杂志文章

    doi:10.1016/j.chom.2010.07.010

    authors: Rubino S,Lee J,Girardin SE

    更新日期:2010-08-19 00:00:00

  • Increased expression of LDL receptor-related protein 1 during human cytomegalovirus infection reduces virion cholesterol and infectivity.

    abstract::In response to virus infection, cells can alter protein expression to modify cellular functions and limit viral replication. To examine host protein expression during infection with human cytomegalovirus (HCMV), an enveloped DNA virus, we performed a semiquantitative, temporal analysis of the cell surface proteome in ...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2012.05.012

    authors: Gudleski-O'Regan N,Greco TM,Cristea IM,Shenk T

    更新日期:2012-07-19 00:00:00

  • Gut Bacteria-Not for the Faint of Heart.

    abstract::The role of gut bacteria in complications of heart inflammation has previously not been fully understood. Gil-Cruz et al. (2019) demonstrate a commensal Bacteroides species that triggers a cross-immune response against a bacterial protein and heart epitope, causing cardiomyopathy. This study links commensal bacteria w...

    journal_title:Cell host & microbe

    pub_type: 评论,杂志文章

    doi:10.1016/j.chom.2019.12.011

    authors: Mandelbaum N,Gefen T,Geva-Zatorsky N

    更新日期:2020-01-08 00:00:00

  • Malaria pulls a FASt one.

    abstract::Cure of rodent malaria with the biocide triclosan highlighted the enzyme FabI as an antimalarial drug target. In this issue of Cell Host & Microbe, Yu et al. (2008) show that FabI is not the principle target of triclosan yet plays an important role specifically in malaria liver stage development. ...

    journal_title:Cell host & microbe

    pub_type: 评论,杂志文章

    doi:10.1016/j.chom.2008.11.006

    authors: Spalding MD,Prigge ST

    更新日期:2008-12-11 00:00:00

  • A Highly Pathogenic Avian H7N9 Influenza Virus Isolated from A Human Is Lethal in Some Ferrets Infected via Respiratory Droplets.

    abstract::Low pathogenic H7N9 influenza viruses have recently evolved to become highly pathogenic, raising concerns of a pandemic, particularly if these viruses acquire efficient human-to-human transmissibility. We compared a low pathogenic H7N9 virus with a highly pathogenic isolate, and two of its variants that represent neur...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2017.09.008

    authors: Imai M,Watanabe T,Kiso M,Nakajima N,Yamayoshi S,Iwatsuki-Horimoto K,Hatta M,Yamada S,Ito M,Sakai-Tagawa Y,Shirakura M,Takashita E,Fujisaki S,McBride R,Thompson AJ,Takahashi K,Maemura T,Mitake H,Chiba S,Zhong G,Fan

    更新日期:2017-11-08 00:00:00

  • Proteome-wide quantification and characterization of oxidation-sensitive cysteines in pathogenic bacteria.

    abstract::Thiol-group oxidation of active and allosteric cysteines is a widespread regulatory posttranslational protein modification. Pathogenic bacteria, including Pseudomonas aeruginosa and Staphylococcus aureus, use regulatory cysteine oxidation to respond to and overcome reactive oxygen species (ROS) encountered in the host...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2013.02.004

    authors: Deng X,Weerapana E,Ulanovskaya O,Sun F,Liang H,Ji Q,Ye Y,Fu Y,Zhou L,Li J,Zhang H,Wang C,Alvarez S,Hicks LM,Lan L,Wu M,Cravatt BF,He C

    更新日期:2013-03-13 00:00:00

  • Dyeing to learn more about the gut microbiota.

    abstract::The switch from culture-based enumeration to deep sequencing has enabled microbial community composition to be profiled en masse. In a new article, Maurice et al. (2013) report the use of fluorescence-activated cell sorting (FACS) to perform a high-throughput analysis of gut microbiota community function. ...

    journal_title:Cell host & microbe

    pub_type: 评论,杂志文章

    doi:10.1016/j.chom.2013.01.011

    authors: Donia MS,Fischbach MA

    更新日期:2013-02-13 00:00:00

  • Drosophila intestinal response to bacterial infection: activation of host defense and stem cell proliferation.

    abstract::Although Drosophila systemic immunity is extensively studied, little is known about the fly's intestine-specific responses to bacterial infection. Global gene expression analysis of Drosophila intestinal tissue to oral infection with the Gram-negative bacterium Erwinia carotovora revealed that immune responses in the ...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2009.01.003

    authors: Buchon N,Broderick NA,Poidevin M,Pradervand S,Lemaitre B

    更新日期:2009-02-19 00:00:00

  • STEVOR is a Plasmodium falciparum erythrocyte binding protein that mediates merozoite invasion and rosetting.

    abstract::Variant surface antigens play an important role in Plasmodium falciparum malaria pathogenesis and in immune evasion by the parasite. Although most work to date has focused on P. falciparum Erythrocyte Membrane Protein 1 (PfEMP1), two other multigene families encoding STEVOR and RIFIN are expressed in invasive merozoit...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2014.06.004

    authors: Niang M,Bei AK,Madnani KG,Pelly S,Dankwa S,Kanjee U,Gunalan K,Amaladoss A,Yeo KP,Bob NS,Malleret B,Duraisingh MT,Preiser PR

    更新日期:2014-07-09 00:00:00

  • Intestinal Bile Acids Induce a Morphotype Switch in Vancomycin-Resistant Enterococcus that Facilitates Intestinal Colonization.

    abstract::Vancomycin-resistant Enterococcus (VRE) are highly antibiotic-resistant and readily transmissible pathogens that cause severe infections in hospitalized patients. We discovered that lithocholic acid (LCA), a secondary bile acid prevalent in the cecum and colon of mice and humans, impairs separation of growing VRE dipl...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2019.03.008

    authors: McKenney PT,Yan J,Vaubourgeix J,Becattini S,Lampen N,Motzer A,Larson PJ,Dannaoui D,Fujisawa S,Xavier JB,Pamer EG

    更新日期:2019-05-08 00:00:00

  • A Sialylated Voltage-Dependent Ca2+ Channel Binds Hemagglutinin and Mediates Influenza A Virus Entry into Mammalian Cells.

    abstract::Influenza A virus (IAV) infection is initiated by the attachment of the viral glycoprotein hemagglutinin (HA) to sialic acid on the host cell surface. However, the sialic acid-containing receptor crucial for IAV infection has remained unidentified. Here, we show that HA binds to the voltage-dependent Ca2+ channel Cav1...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2018.04.015

    authors: Fujioka Y,Nishide S,Ose T,Suzuki T,Kato I,Fukuhara H,Fujioka M,Horiuchi K,Satoh AO,Nepal P,Kashiwagi S,Wang J,Horiguchi M,Sato Y,Paudel S,Nanbo A,Miyazaki T,Hasegawa H,Maenaka K,Ohba Y

    更新日期:2018-06-13 00:00:00

  • A Ribose-Scavenging System Confers Colonization Fitness on the Human Gut Symbiont Bacteroides thetaiotaomicron in a Diet-Specific Manner.

    abstract::Efficient nutrient acquisition in the human gut is essential for microbial persistence. Although polysaccharides have been well-studied nutrients for the gut microbiome, other resources such as nucleic acids and nucleosides are less studied. We describe several ribose-utilization systems (RUSs) that are broadly repres...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2019.11.009

    authors: Glowacki RWP,Pudlo NA,Tuncil Y,Luis AS,Sajjakulnukit P,Terekhov AI,Lyssiotis CA,Hamaker BR,Martens EC

    更新日期:2020-01-08 00:00:00

  • Nutritional Support from the Intestinal Microbiota Improves Hematopoietic Reconstitution after Bone Marrow Transplantation in Mice.

    abstract::Bone marrow transplantation (BMT) offers curative potential for patients with high-risk hematologic malignancies, but the post-transplantation period is characterized by profound immunodeficiency. Recent studies indicate that the intestinal microbiota not only regulates mucosal immunity, but can also contribute to sys...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2018.03.002

    authors: Staffas A,Burgos da Silva M,Slingerland AE,Lazrak A,Bare CJ,Holman CD,Docampo MD,Shono Y,Durham B,Pickard AJ,Cross JR,Stein-Thoeringer C,Velardi E,Tsai JJ,Jahn L,Jay H,Lieberman S,Smith OM,Pamer EG,Peled JU,Cohen

    更新日期:2018-04-11 00:00:00

  • Polyclonal and specific antibodies mediate protective immunity against enteric helminth infection.

    abstract::Anti-helminth immunity involves CD4+ T cells, yet the precise effector mechanisms responsible for parasite killing or expulsion remain elusive. We now report an essential role for antibodies in mediating immunity against the enteric helminth Heligmosomoides polygyrus (Hp), a natural murine parasite that establishes ch...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2008.08.014

    authors: McCoy KD,Stoel M,Stettler R,Merky P,Fink K,Senn BM,Schaer C,Massacand J,Odermatt B,Oettgen HC,Zinkernagel RM,Bos NA,Hengartner H,Macpherson AJ,Harris NL

    更新日期:2008-10-16 00:00:00

  • Host cell subversion by Toxoplasma GRA16, an exported dense granule protein that targets the host cell nucleus and alters gene expression.

    abstract::After invading host cells, Toxoplasma gondii multiplies within a parasitophorous vacuole (PV) that is maintained by parasite proteins secreted from organelles called dense granules. Most dense granule proteins remain within the PV, and few are known to access the host cell cytosol. We identify GRA16 as a dense granule...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2013.03.002

    authors: Bougdour A,Durandau E,Brenier-Pinchart MP,Ortet P,Barakat M,Kieffer S,Curt-Varesano A,Curt-Bertini RL,Bastien O,Coute Y,Pelloux H,Hakimi MA

    更新日期:2013-04-17 00:00:00

  • F11L-mediated inhibition of RhoA-mDia signaling stimulates microtubule dynamics during vaccinia virus infection.

    abstract::Microtubules play an important role in the transport of viral pathogens during the establishment of their infection cycles. The microtubule cytoskeleton also facilitates efficient release of newly assembled progeny at later stages of infection. However, the precise effects of viral infection on microtubule dynamics ar...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2007.04.007

    authors: Arakawa Y,Cordeiro JV,Way M

    更新日期:2007-05-17 00:00:00

  • Adenovirus evasion of interferon-mediated innate immunity by direct antagonism of a cellular histone posttranslational modification.

    abstract::Overcoming the cellular type I interferon (IFN) host defense response is critical for a virus to ensure successful infection. Investigating the effects of human adenovirus (HAdV) infection on global cellular histone posttranslational modification (hPTM), we discovered that virus infection-induced activation of IFN sig...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2012.05.005

    authors: Fonseca GJ,Thillainadesan G,Yousef AF,Ablack JN,Mossman KL,Torchia J,Mymryk JS

    更新日期:2012-06-14 00:00:00

  • A Large Polysaccharide Produced by Helicobacter hepaticus Induces an Anti-inflammatory Gene Signature in Macrophages.

    abstract::Interactions between the host and its microbiota are of mutual benefit and promote health. Complex molecular pathways underlie this dialog, but the identity of microbe-derived molecules that mediate the mutualistic state remains elusive. Helicobacter hepaticus is a member of the mouse intestinal microbiota that is tol...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2017.11.002

    authors: Danne C,Ryzhakov G,Martínez-López M,Ilott NE,Franchini F,Cuskin F,Lowe EC,Bullers SJ,Arthur JSC,Powrie F

    更新日期:2017-12-13 00:00:00

  • Infection-Induced Peroxisome Biogenesis Is a Metabolic Strategy for Herpesvirus Replication.

    abstract::Viral proteins have evolved to target cellular organelles and usurp their functions for virus replication. Despite the knowledge of these critical functions for several organelles, little is known about peroxisomes during infection. Peroxisomes are primarily metabolic organelles with important functions in lipid metab...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2018.09.002

    authors: Jean Beltran PM,Cook KC,Hashimoto Y,Galitzine C,Murray LA,Vitek O,Cristea IM

    更新日期:2018-10-10 00:00:00

  • Bacteria Tell Us How to Protect Our Intestine.

    abstract::The inner colon mucus layer capacity to separate bacteria from the epithelium is dependent on bacterial colonizers signaling to the host epithelium. In this issue of Cell Host & Microbe, Wlodarska et al. (2017) demonstrate that the mucin-utilizing Peptostreptococcus russellii protects the host from inflammatory diseas...

    journal_title:Cell host & microbe

    pub_type: 杂志文章

    doi:10.1016/j.chom.2017.06.011

    authors: Birchenough G,Hansson GC

    更新日期:2017-07-12 00:00:00