Crystal structure and biochemical characterization of O-acetylhomoserine acetyltransferase from Mycobacterium smegmatis ATCC 19420.

Abstract:

:Mycobacterium smegmatis is a good model for studying the physiology and pathogenesis of Mycobacterium tuberculosis due to its genetic similarity. As methionine biosynthesis exists only in microorganisms, the enzymes involved in methionine biosynthesis can be a potential target for novel antibiotics. Homoserine O-acetyltransferase from M. smegmatis (MsHAT) catalyzes the transfer of acetyl-group from acetyl-CoA to homoserine. To investigate the molecular mechanism of MsHAT, we determined its crystal structure in apo-form and in complex with either CoA or homoserine and revealed the substrate binding mode of MsHAT. A structural comparison of MsHAT with other HATs suggests that the conformation of the α5 to α6 region might influence the shape of the dimer. In addition, the active site entrance shows an open or closed conformation and might determine the substrate binding affinity of HATs.

authors

Sagong HY,Hong J,Kim KJ

doi

10.1016/j.bbrc.2019.07.117

subject

Has Abstract

pub_date

2019-09-24 00:00:00

pages

399-406

issue

3

eissn

0006-291X

issn

1090-2104

pii

S0006-291X(19)31485-8

journal_volume

517

pub_type

杂志文章
  • Purification and properties of 4-hydroxyphenylacetic acid 3-hydroxylase from Pseudomonas putida.

    abstract::4-Hydroxyphenylacetic acid 3-hydroxylase is a key enzyme in the pathway for the microbial degradation of phenylalanine, tyrosine and many aromatic amines. This enzyme was purified to homogeneity from Pseudomonas putida by affinity chromatography. The protein had a molecular weight of 91,000 and was a dimer of identica...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/0006-291x(88)90173-8

    authors: Raju SG,Kamath AV,Vaidyanathan CS

    更新日期:1988-07-29 00:00:00

  • A test of the role of electrostatic interactions in determining the CO stretch frequency in carbonmonoxymyoglobin.

    abstract::The vibrational frequency of CO bound to myoglobin can be varied by up to 60 cm-1 by making site-specific mutations in the distal pocket. These changes may result from specific chemical interactions between distal amino acids and the CO or from changes in the electrostatic field of the distal pocket. In this paper, we...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1006/bbrc.1995.1950

    authors: Decatur SM,Boxer SG

    更新日期:1995-07-06 00:00:00

  • Lipoic acid entrains the hepatic circadian clock and lipid metabolic proteins that have been desynchronized with advanced age.

    abstract::It is well established that lipid metabolism is controlled, in part, by circadian clocks. However, circadian clocks lose temporal precision with age and correlates with elevated incidence in dyslipidemia and metabolic syndrome in older adults. Because our lab has shown that lipoic acid (LA) improves lipid homeostasis ...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2014.05.112

    authors: Keith D,Finlay L,Butler J,Gómez L,Smith E,Moreau R,Hagen T

    更新日期:2014-07-18 00:00:00

  • (+)cis-dioxolane stimulation of cytosolic calcium oscillations and phasic contractions of myometrial smooth muscle.

    abstract::These studies sought to determine the intracellular mechanisms underlying muscarinic receptor stimulated phasic contractions of myometrial smooth muscle. Utilizing cytosolic calcium imaging studies with Fura-2 loaded muscle strips, along with in vitro isometric contraction studies, we have demonstrated that phasic myo...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1006/bbrc.1997.6163

    authors: Phillippe M,Basa A

    更新日期:1997-02-24 00:00:00

  • Butyrate regulates glycosylation of the glycoprotein hormone alpha subunit secreted by "glucose-starved" human liver cells.

    abstract::The alpha-subunit secreted by Chang human liver cells was labeled in vitro with [35S]Met, [3H]GlcN, or [3H]Fuc, and the biosynthetic products were studied by SDS-PAGE. Cells labeled with [35S]Met secreted a homogeneous 23K-24K alpha. In contrast, alpha secreted from cells labeled with [3H]GlcN and [3H]Fuc in the absen...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/0006-291x(83)91805-3

    authors: Morrow JS,Weintraub BD,Rosen SW

    更新日期:1983-04-15 00:00:00

  • Characterization of a rat variant alpha-fetoprotein.

    abstract::The rat adult liver and hepatocyte lines express an 1.7-kb variant alpha-fetoprotein (AFP) mRNA which differs from the 2.2-kb fetal AFP transcript in sequence in the 5' region. Here we report the characterization of a variant AFP cDNA, ARFP9, which is 1349 bp in length and encodes a 325 amino acid polypeptide. Nucleot...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/0006-291x(92)91674-f

    authors: Watanabe T,Jimenez-Molina JL,Chou JY

    更新日期:1992-06-15 00:00:00

  • Melanosome degradation in epidermal keratinocytes related to lysosomal protease cathepsin V.

    abstract::The cause of hyperpigmentation, such as solar lentigo and seborrheic keratosis, is the excessive accumulation of melanin pigments in the epidermal basal layer. Melanin pigments are synthesized in the melanosomes, which are specific organelles produced by melanocytes in the basal layer. Melanosomes containing melanin p...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2018.04.070

    authors: Homma T,Kageyama S,Nishikawa A,Nagata K

    更新日期:2018-06-02 00:00:00

  • Estimation of pyruvate decarboxylation in perfused rat skeletal muscle.

    abstract::By the determination of pyruvate dehydrogenase activity in tissue homogenates only limited information is gained on the actual metabolic flux. We therefore determined pyruvate decarboxylation in isolated rat hindlimbs non recirculating perfused with physiological (1-14C)pyruvate levels. On the basis of perfusate pyruv...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/0006-291x(83)90545-4

    authors: Schadewaldt P,Münch U,Prengel M,Staib W

    更新日期:1983-10-31 00:00:00

  • Functional role for glycosylated subtypes of rat endothelin receptors.

    abstract::Glycosylation of endothelin (ET) receptors was found to occur in rat cerebellar and atrial membranes. Specifically, we investigated whether the ETA and ETB receptor subtypes differed in their sensitivity to deglycosylation treatment and whether the two affinity states (nanomolar and picomolar) observed in each recepto...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1006/bbrc.1998.8646

    authors: Shraga-Levine Z,Sokolovsky M

    更新日期:1998-05-19 00:00:00

  • Interaction of estrogen receptor complexes with the promoter region of genes that are negatively regulated by estrogens: the alpha 2u-globulins.

    abstract::Since estrogens strongly suppress the expression of alpha 2u-globulin genes in the rat liver, we studied the binding of estrogen-receptor complexes to fragments derived from alpha 2u-globulin gene RAO 01 using a DNA-cellulose competition assay. Rat uterus cytosol labelled with [3H]estradiol was used as a source of the...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/s0006-291x(05)80127-5

    authors: Van Dijck P,Verhoeven G

    更新日期:1992-01-15 00:00:00

  • Down-regulation of connexin43 gap junction by serum deprivation in human endothelial cells was improved by (-)-Epigallocatechin gallate via ERK MAP kinase pathway.

    abstract::Intercellular communication through gap junctions (GJIC) plays an essential role in maintaining the functional integrity of vascular endothelium. Despite emerging evidence suggests that (-)-Epigallocatechin gallate (EGCG) may improve endothelial function. However, its effect on Cx43 gap junction in endothelial cells r...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2010.11.096

    authors: Zhao Y,Yu L,Xu S,Qiu F,Fan Y,Fu G

    更新日期:2011-01-07 00:00:00

  • Calcium-dependent activation of human neutrophils by a synthetic ionophore.

    abstract::Synthetic block copolymers composed of polyoxyethylene and poly-oxypropylene have been demonstrated to possess ionophore activity selective for monovalent cations and to cause histamine release from mouse mast cells and human basophils. We now report calcium-dependent release of granule contents from human neutrophils...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/0006-291x(89)92122-0

    authors: Atkinson P,Berkow RL

    更新日期:1989-08-30 00:00:00

  • Neonatal mortality and leanness in mice lacking the ARID transcription factor Mrf-2.

    abstract::Proteins containing the ARID (AT-rich interaction domain) DNA-binding motif regulate gene expression and differentiation in fungi, plants, and animals. This report describes phenotypes resulting from targeted disruption of the ARID gene Mrf-2. Homozygous loss of Mrf-2 resulted in a high rate of neonatal mortality that...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2003.11.026

    authors: Whitson RH,Tsark W,Huang TH,Itakura K

    更新日期:2003-12-26 00:00:00

  • Extracellular N-domain alone can mediate specific heterophilic adhesion between members of the carcinoembryonic antigen family, CEACAM6 and CEACAM8.

    abstract::The domain(s) responsible for the specific heterophilic adhesion between two members of the carcinoembryonic antigen (CEA) family, CEACAM6 and CEACAM8, both of which with three extracellular domains, were investigated using Chinese hamster ovary (CHO) transfectants expressing chimeric antigens. Using a chimeric antige...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1006/bbrc.2000.3858

    authors: Oikawa S,Sugiyama M,Kuroki M,Kuroki M,Nakazato H

    更新日期:2000-11-30 00:00:00

  • Endoplasmic reticulum calcium transport ATPase expression during differentiation of colon cancer and leukaemia cells.

    abstract::The calcium homeostasis of the endoplasmic reticulum (ER) is connected to a multitude of cell functions involved in intracellular signal transduction, control of proliferation, programmed cell death, or the synthesis of mature proteins. Calcium is accumulated in the ER by various biochemically distinct sarco/endoplasm...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章,评审

    doi:10.1016/j.bbrc.2004.08.030

    authors: Papp B,Brouland JP,Gélébart P,Kovàcs T,Chomienne C

    更新日期:2004-10-01 00:00:00

  • Adrenodoxin supports reactions catalyzed by microsomal steroidogenic cytochrome P450s.

    abstract::The interaction of adrenodoxin (Adx) and NADPH cytochrome P450 reductase (CPR) with human microsomal steroidogenic cytochrome P450s was studied. It is found that Adx, mitochondrial electron transfer protein, is able to support reactions catalyzed by human microsomal P450s: full length CYP17, truncated CYP17, and trunc...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2006.12.047

    authors: Pechurskaya TA,Harnastai IN,Grabovec IP,Gilep AA,Usanov SA

    更新日期:2007-02-16 00:00:00

  • Amyloid-beta and tau pathology following repetitive mild traumatic brain injury.

    abstract::Neurodegenerative diseases are characterized by distinctive neuropathological alterations, including the cerebral accumulation of misfolded protein aggregates, neuroinflammation, synaptic dysfunction, and neuronal loss, along with behavioral impairments. Traumatic brain injury (TBI) is believed to be an important risk...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章,评审

    doi:10.1016/j.bbrc.2016.07.123

    authors: Edwards G 3rd,Moreno-Gonzalez I,Soto C

    更新日期:2017-02-19 00:00:00

  • Trafficking of astrocytic vesicles in hippocampal slices.

    abstract::The increasingly appreciated role of astrocytes in neurophysiology dictates a thorough understanding of the mechanisms underlying the communication between astrocytes and neurons. In particular, the uptake and release of signaling substances into/from astrocytes is considered as crucial. The release of different gliot...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2009.10.119

    authors: Potokar M,Kreft M,Lee SY,Takano H,Haydon PG,Zorec R

    更新日期:2009-12-25 00:00:00

  • Structure-activity relationship of endothelin: importance of charged groups.

    abstract::Endothelin (ET)-related peptides including ET-1 (1-39) were synthesized, and their constricting activity in rat pulmonary artery rings and pressor activity in unanesthetized rat were measured to elucidate their structure-activity relationship. The vasoconstrictor activities of ET-2, ET-3 and sarafotoxin S6b were one-h...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/0006-291x(89)92153-0

    authors: Nakajima K,Kubo S,Kumagaye S,Nishio H,Tsunemi M,Inui T,Kuroda H,Chino N,Watanabe TX,Kimura T

    更新日期:1989-08-30 00:00:00

  • Altered localization of amyloid precursor protein under endoplasmic reticulum stress.

    abstract::Recent reports have shown that the endoplasmic reticulum (ER) stress is relevant to the pathogenesis of Alzheimer disease. Following the amyloid cascade hypothesis, we therefore attempted to investigate the effects of ER stress on amyloid-beta peptide (Abeta) generation. In this study, we found that ER stress altered ...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2006.03.173

    authors: Kudo T,Okumura M,Imaizumi K,Araki W,Morihara T,Tanimukai H,Kamagata E,Tabuchi N,Kimura R,Kanayama D,Fukumori A,Tagami S,Okochi M,Kubo M,Tanii H,Tohyama M,Tabira T,Takeda M

    更新日期:2006-06-02 00:00:00

  • Inflammatory effect of endosulfan via NF-kappaB activation in macrophages.

    abstract::Macrophages are essential for the inflammatory response process because they release a wide variety of proinflammatory mediators. Endosulfan is extremely toxic to invertebrates and has been implicated in various mammalian toxicities. However, its influence on production of cytokine or on the functions of macrophages i...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2007.01.062

    authors: Han EH,Hwang YP,Kim HG,Jeong HG

    更新日期:2007-04-20 00:00:00

  • Identification of PTE2, a human peroxisomal long-chain acyl-CoA thioesterase.

    abstract::Computer-based approaches identified PTE2 as a candidate human peroxisomal acyl-CoA thioesterase gene. The PTE2 gene product is highly similar to the rat cytosolic and mitochondrial thioesterases, CTE1 and MTE1, respectively, and terminates in a tripeptide sequence, serine-lysine-valine(COOH), that resembles the conse...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1006/bbrc.2000.3285

    authors: Jones JM,Gould SJ

    更新日期:2000-08-18 00:00:00

  • Newly expressed proteins of mouse embryonic fibroblasts irradiated to be inactive.

    abstract::It has been found that post-radiation mouse embryonic fibroblasts can well maintain the pluripotency in human embryonic stem cells. However, the molecular mechanism remains unclear. In the present study, the new protein expression profile of post-radiation mouse embryonic fibroblasts was analyzed by immobilized pH gra...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2004.01.089

    authors: Xie CQ,Lin G,Luo KL,Luo SW,Lu GX

    更新日期:2004-03-12 00:00:00

  • Involvement of lysosomal integral membrane protein-2 in the activation of autophagy.

    abstract::Lysosomal integral membrane protein-2 (LIMP-2) is a type III transmembrane protein that is highly glycosylated and mainly localized to the lysosomal membrane. The diverse functions of LIMP-2 are currently being uncovered; however, its participation in macroautophagy, usually described as autophagy, has not yet been we...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2020.09.114

    authors: Sakane H,Urabe J,Nakahira S,Hino K,Miyata N,Akasaki K

    更新日期:2020-12-17 00:00:00

  • Targeting of renal proximal tubule Na,K-ATPase by salt-inducible kinase.

    abstract::The renal proximal tubule (RPT) is a central locale for Na+ reabsorption, and blood pressure regulation. Na+ reabsorption in the RPT depends upon the Na,K-ATPase, which is controlled by a complex regulatory network, including Salt-Inducible Protein Kinase (SIK). SIKs are recently discovered members of the AMP-activate...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章,评审

    doi:10.1016/j.bbrc.2010.02.037

    authors: Taub M,Springate JE,Cutuli F

    更新日期:2010-03-12 00:00:00

  • Cloning and characterization of a novel RNA polymerase II C-terminal domain phosphatase.

    abstract::Reversible phosphorylation of RNA polymerase (RNAP) II's largest subunit C-terminal domain (CTD) is a key event during mRNA metabolism. The CTD phosphatase, FCP1, catalyzes the dephosphorylation of RNAP II and is thought to play a major role in polymerase recycling. In this study, we isolated a novel phosphatase gene ...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2005.04.065

    authors: Zheng H,Ji C,Gu S,Shi B,Wang J,Xie Y,Mao Y

    更新日期:2005-06-17 00:00:00

  • Growth inhibition of leukemia cell line CEM-C1 by farnesol: effects of phosphatidylcholine and diacylglycerol.

    abstract::Acute leukemia cells of the established line CEM-C1 were treated during growth in serum-free medium with various concentrations of trans-trans farnesol. At concentrations ranging from 9.0 to 31.5 microM, farnesol inhibited growth of these cells without causing cell lysis. This effect was preceded by very rapid inhibit...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/s0006-291x(05)80842-3

    authors: Melnykovych G,Haug JS,Goldner CM

    更新日期:1992-07-15 00:00:00

  • Induction of allergic contact dermatitis by astigmatid mite-derived monoterpene, alpha-acaridial.

    abstract::alpha-Acaridial [2(E)-(4-methyl-3-pentenyl)butenedial] is a novel monoterpene secreted from the house dust mites. Because of its molecular nature of a highly reactive, small lipidic compound, we addressed whether alpha-acaridial might function as a haptenic allergen that induced allergic contact dermatitis. Mice sensi...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2008.07.148

    authors: Sasai T,Hirano Y,Maeda S,Matsunaga I,Otsuka A,Morita D,Nishida R,Nakayama H,Kuwahara Y,Sugita M,Mori N

    更新日期:2008-10-24 00:00:00

  • Alpha-agglutinin expression in Saccharomyces cerevisiae.

    abstract::A polyclonal antiserum raised against purified alpha-agglutinin was made specific for alpha-agglutinin after adsorption with a cells. The adsorbed antiserum identified alpha-agglutinin peptides on Western blots and bound to cell surface alpha-agglutinin, inhibiting the binding of alpha cells to a cells. Using the anti...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/0006-291x(89)91557-x

    authors: Wojciechowicz D,Lipke PN

    更新日期:1989-05-30 00:00:00

  • Purification and characterization of proteins with associated tyrosine protein kinase activity from human B lymphocytes.

    abstract::Burkitt lymphoma cells and their counterpart of normal origin contain proteins with associated tyrosine protein, kinase activity. These proteins were isolated by affinity chromatography and Fast Pressure Liquid Chromatography. Proteins with enzyme activity had an app. M. W. of 47 KDa. This protein in extracts of Burki...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/0006-291x(89)92338-3

    authors: Semmel M,Biquard JM,Pavloff N,Hanania N,Gay F

    更新日期:1989-09-15 00:00:00