Abstract:
:RING and U-box E3 ubiquitin ligases regulate diverse eukaryotic processes and have been implicated in numerous diseases, but targeting these enzymes remains a major challenge. We report the development of three ubiquitin variants (UbVs), each binding selectively to the RING or U-box domain of a distinct E3 ligase: monomeric UBE4B, phosphorylated active CBL, or dimeric XIAP. Structural and biochemical analyses revealed that UbVs specifically inhibited the activity of UBE4B or phosphorylated CBL by blocking the E2∼Ub binding site. Surprisingly, the UbV selective for dimeric XIAP formed a dimer to stimulate E3 activity by stabilizing the closed E2∼Ub conformation. We further verified the inhibitory and stimulatory functions of UbVs in cells. Our work provides a general strategy to inhibit or activate RING/U-box E3 ligases and provides a resource for the research community to modulate these enzymes.
journal_name
Mol Celljournal_title
Molecular cellauthors
Gabrielsen M,Buetow L,Nakasone MA,Ahmed SF,Sibbet GJ,Smith BO,Zhang W,Sidhu SS,Huang DTdoi
10.1016/j.molcel.2017.09.027subject
Has Abstractpub_date
2017-10-19 00:00:00pages
456-470.e10issue
2eissn
1097-2765issn
1097-4164pii
S1097-2765(17)30705-0journal_volume
68pub_type
杂志文章相关文献
MOLECULAR CELL文献大全abstract::Activation of NF-kappaB is regulated via numerous ubiquitin- and proteasome-mediated steps; an important one is processing of the precursor p105 to the p50 active subunit. The mechanisms involved are largely unknown, because this is an exceptional case where the ubiquitin system does not destroy its substrate complete...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2009.01.023
更新日期:2009-02-27 00:00:00
abstract::The recent paper by Stadlmann et al. (2017) provides a novel algorithm for glycoproteomics in which complex glycopeptides can be identified in complex mixtures to aid in characterizing both the site of glycosylation and the glycan structure. ...
journal_title:Molecular cell
pub_type: 评论,杂志文章
doi:10.1016/j.molcel.2017.11.024
更新日期:2017-12-07 00:00:00
abstract::Eukaryotic neurotransmitter:sodium symporters (NSSs), targets for antidepressants and psychostimulants, terminate neurotransmission by sodium-driven reuptake. The crystal structure of LeuT(Aa), a prokaryotic NSS homolog, revealed an occluded state in which one leucine and two Na(+) ions are bound, but provided limited...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2008.05.008
更新日期:2008-06-20 00:00:00
abstract::Allosteric communication between interacting molecules is fundamental to signal transduction and many other cellular processes. To better understand the relationship between nuclear receptor (NR) ligand positioning and the formation of the coactivator binding pocket, we investigated the determinants of ligand selectiv...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/s1097-2765(04)00054-1
更新日期:2004-02-13 00:00:00
abstract::It has been suspected that cell-cycle progression might be functionally coupled with RNA processing. However, little is known about the role of the precise splicing control in cell-cycle progression. Here, we report that SON, a large Ser/Arg (SR)-related protein, is a splicing cofactor contributing to efficient splici...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2011.03.014
更新日期:2011-04-22 00:00:00
abstract::Ubiquitination typically occurs through the sequential action of three enzymes catalyzing ubiquitin activation (E1), conjugation (E2), and ligation (E3) and regulates diverse eukaryotic cellular processes. Although monoubiquitination commonly confers nondegradative activities, mechanisms underlying its temporal and sp...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2016.04.022
更新日期:2016-06-16 00:00:00
abstract::Cell pattern in the ventral neural tube is organized by Sonic hedgehog (Shh) secreted by floor plate cells. To assay the range of direct Shh action, we developed a general method for blocking transduction of Hedgehog (Hh) signals through ectopic expression of a deleted form of the Hh receptor Patched (Ptc), termed Ptc...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/s1097-2765(01)00271-4
更新日期:2001-06-01 00:00:00
abstract::Multi-subunit SMC ATPases control chromosome superstructure and DNA topology, presumably by DNA translocation and loop extrusion. Chromosomal DNA is entrapped within the tripartite SMCkleisin ring. Juxtaposed SMC heads ("J heads") or engaged SMC heads ("E heads") split the SMCkleisin ring into "S" and "K" sub-compartm...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2019.05.001
更新日期:2019-07-25 00:00:00
abstract::The protective "cap" that assembles at chromosome ends recruits and controls an intricate network of biochemical activities, each one critical for telomere structure and the maintenance of genomic stability. Recent studies have uncovered the components of telomere caps and have started to define the pathways that lead...
journal_title:Molecular cell
pub_type: 杂志文章,评审
doi:10.1016/s1097-2765(03)00531-8
更新日期:2004-01-16 00:00:00
abstract::In mammalian cells, histone deacetylase (HDAC) and Sirtuin (SIRT) are two families responsible for removing acetyl groups from acetylated proteins. Here, we describe protein deacetylation coupled with deacetylimination as a function of lysyl oxidase (LOX) family members. LOX-like 3 (Loxl3) associates with Stat3 in the...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2016.12.002
更新日期:2017-01-19 00:00:00
abstract::Study of mutant phenotypes is a fundamental method for understanding gene function. The construction of a near-complete collection of yeast knockouts (YKO) and the unique molecular barcodes (or TAGs) that identify each strain has enabled quantitative functional profiling of Saccharomyces cerevisiae. By using these TAG...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2004.09.035
更新日期:2004-11-05 00:00:00
abstract::The bHLH factors HAND1 and HAND2 are required for heart, vascular, neuronal, limb, and extraembryonic development. Unlike most bHLH proteins, HAND factors exhibit promiscuous dimerization properties. We report that phosphorylation/dephosphorylation via PKA, PKC, and a specific heterotrimeric protein phosphatase 2A (PP...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/s1097-2765(03)00425-8
更新日期:2003-11-01 00:00:00
abstract::Mammalian target of rapamycin (mTOR) activity is regulated by assembly of two functionally distinct complexes, mTORC1 and mTORC2. In syndecan-4 (S4) null endothelial cells, mTORC2 activity is reduced, resulting in decreased Akt activation, while mTORC1 activity is increased. Levels of rictor, mLST8, and mSin-1 are unc...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2008.09.010
更新日期:2008-10-10 00:00:00
abstract::Mitochondrial crista structure partitions vital cellular reactions and is precisely regulated by diverse cellular signals. Here, we show that, in Drosophila, mitochondrial cristae undergo dynamic remodeling among distinct subcellular regions and the Parkinson's disease (PD)-linked Ser/Thr kinase PINK1 participates in ...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2018.01.026
更新日期:2018-03-01 00:00:00
abstract::Sen1 of S. cerevisiae is a known component of the NRD complex implicated in transcription termination of nonpolyadenylated as well as some polyadenylated RNA polymerase II transcripts. We now show that Sen1 helicase possesses a wider function by restricting the occurrence of RNA:DNA hybrids that may naturally form dur...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2010.12.007
更新日期:2011-01-07 00:00:00
abstract::Necroptosis is an important form of lytic cell death triggered by injury and infection, but whether mixed lineage kinase domain-like (MLKL) is sufficient to execute this pathway is unknown. In a genetic selection for human cell mutants defective for MLKL-dependent necroptosis, we identified mutations in IPMK and ITPK1...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2018.05.010
更新日期:2018-06-07 00:00:00
abstract::The methylcytosine oxidase TET proteins play important roles in DNA demethylation and development. However, it remains elusive how exactly they target substrates and execute oxidation. Interestingly, we found that, in mice, the full-length TET1 isoform (TET1e) is restricted to early embryos, embryonic stem cells (ESCs...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2016.10.030
更新日期:2016-12-15 00:00:00
abstract::Klein et al. (2020) demonstrate for the first time that small-molecule cancer therapeutics are selectively partitioned and concentrated within phase-separated nuclear condensates, providing new insights to drug efficacy and creating the opportunity for enhanced control of therapeutic targeting. ...
journal_title:Molecular cell
pub_type: 评论,杂志文章
doi:10.1016/j.molcel.2020.07.029
更新日期:2020-08-20 00:00:00
abstract::BRAF is an oncogenic protein kinase that drives cell growth and proliferation through the MEK-ERK signaling pathway. BRAF inhibitors have demonstrated antitumor efficacy in melanoma therapy but have also been found to be associated with the development of cutaneous squamous cell carcinomas (cSCCs) in certain patients....
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2013.08.044
更新日期:2013-10-24 00:00:00
abstract::Molecular motors are the long-haul carriers of eukaryotic cells, moving cargos bidirectionally along microtubule tracks. In the December 12th issue of Cell, report that HDAC6, a tubulin deacetylase, functions as an adaptor that links cargos of aggregated protein to the minus end-directed motor, cytoplasmic dynein. ...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/s1097-2765(03)00498-2
更新日期:2003-12-01 00:00:00
abstract::Various experiments have demonstrated a collaborative action of Myc and Ras, both in normal cell growth control as well as during oncogenesis. We now show that Ras enhances the accumulation of Myc activity by stabilizing the Myc protein. Whereas Myc has a very short half-life when produced in the absence of mitogenic ...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/s1097-2765(00)80308-1
更新日期:1999-02-01 00:00:00
abstract::How eukaryotic chromosomes fold inside the nucleus is an age-old question that remains unanswered today. Early biochemical and microscopic studies revealed the existence of chromatin domains and loops as a pervasive feature of interphase chromosomes, but the biological implications of such organizational features were...
journal_title:Molecular cell
pub_type: 杂志文章,评审
doi:10.1016/j.molcel.2016.05.018
更新日期:2016-06-02 00:00:00
abstract::In eukaryotes, the 20S proteasome contains two chymotrypsin-like, two trypsin-like, and two active sites shown here to have caspase-like specificity. We report that certain sites allosterically regulate each other's activities. Substrates of a chymotrypsin-like site stimulate dramatically the caspase-like activity and...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/s1097-2765(00)80341-x
更新日期:1999-09-01 00:00:00
abstract::Prokaryotes use a mechanism called priming to update their CRISPR immunological memory to rapidly counter revisiting, mutated viruses, and plasmids. Here we have determined how new spacers are produced and selected for integration into the CRISPR array during priming. We show that Cas3 couples CRISPR interference to a...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2016.07.011
更新日期:2016-09-01 00:00:00
abstract::Heterochromatin is required to restrict aberrant expression of retrotransposons, but it remains poorly defined due to the underlying repeat-rich sequences. We dissected Suv39h-dependent histone H3 lysine 9 trimethylation (H3K9me3) by genome-wide ChIP sequencing in mouse embryonic stem cells (ESCs). Refined bioinformat...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2014.05.029
更新日期:2014-07-17 00:00:00
abstract::Clathrin-dependent endocytosis has long been presented as the only efficient mechanism by which transmembrane receptors are internalized. We selectively blocked this process using dominant-negative mutants of Eps15 and showed that clathrin-mediated endocytosis of transferrin was inhibited, while endocytosis of interle...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/s1097-2765(01)00212-x
更新日期:2001-03-01 00:00:00
abstract::Target site choice is a complex and poorly understood aspect of DNA transposition despite its importance in rational transposon-mediated gene delivery. Though most transposons choose target sites essentially randomly or with some slight sequence or structural preferences, insertion sequence IS608 from Helicobacter pyl...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2009.05.017
更新日期:2009-06-12 00:00:00
abstract::Copy-number changes generate phenotypic variability in health and disease. Whether organisms protect against copy-number changes is largely unknown. Here, we show that Saccharomyces cerevisiae monitors the copy number of its ribosomal DNA (rDNA) and rapidly responds to copy-number loss with the clonal amplification of...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2018.08.036
更新日期:2018-11-01 00:00:00
abstract::Oncogene-induced senescence (OIS) is a tumor-suppressive mechanism typified by stable proliferative arrest, a persistent DNA damage response, and the senescence-associated secretory phenotype (SASP), which helps to maintain the senescent state and triggers bystander senescence in a paracrine fashion. Here, we demonstr...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2015.07.011
更新日期:2015-09-03 00:00:00
abstract::The formation of mRNPs controls the interaction of the translation and degradation machinery with individual mRNAs. The yeast Scd6 protein and its orthologs regulate translation and mRNA degradation in yeast, C. elegans, D. melanogaster, and humans by an unknown mechanism. We demonstrate that Scd6 represses translatio...
journal_title:Molecular cell
pub_type: 杂志文章
doi:10.1016/j.molcel.2011.11.026
更新日期:2012-01-27 00:00:00