Exploiting the metabolism of PYC expressing HEK293 cells in fed-batch cultures.

Abstract:

:The expression of recombinant yeast pyruvate carboxylase (PYC) in animal cell lines was shown in previous studies to reduce significantly the formation of waste metabolites, although it has translated into mixed results in terms of improved cellular growth and productivity. In this work, we demonstrate that the unique phenotype of PYC expressing cells can be exploited through the application of a dynamic fed-batch strategy and lead to significant process enhancements. Metabolically engineered HEK293 cells stably producing human recombinant IFNα2b and expressing the PYC enzyme were cultured in batch and fed-batch modes. Compared to parental cells, the maximum cell density in batch was increased 1.5-fold and the culture duration was extended by 2.5 days, but the product yield was only marginally increased. Further improvements were achieved by developing and implementing a dynamic fed-batch strategy using a concentrated feed solution. The feeding was based on an automatic control-loop to maintain a constant glucose concentration. This strategy led to a further 2-fold increase in maximum cell density (up to 10.7×10(6)cells/ml) and a final product titer of 160mg/l, representing nearly a 3-fold yield increase compared to the batch process with the parental cell clone.

journal_name

J Biotechnol

journal_title

Journal of biotechnology

authors

Vallée C,Durocher Y,Henry O

doi

10.1016/j.jbiotec.2013.11.002

subject

Has Abstract

pub_date

2014-01-01 00:00:00

pages

63-70

eissn

0168-1656

issn

1873-4863

pii

S0168-1656(13)00485-9

journal_volume

169

pub_type

杂志文章
  • A comparative study of structure, stability and function of sc-tenecteplase in the presence of stabilizing osmolytes.

    abstract::The aim of the present study was to investigate the effect of three routine drug excipients, as osmolytes, in three different concentrations, on structure, thermal stability and the activity of single-chain (sc-) tenecteplase. To see the influence of trehalose, mannitol, and sucrose on the structure, stability and func...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2018.05.014

    authors: Bayat M,Gourabi H,Khammari A,Ahmad F,Saboury AA

    更新日期:2018-08-20 00:00:00

  • Expression of fungal pectin methylesterase in transgenic tobacco leads to alteration in cell wall metabolism and a dwarf phenotype.

    abstract::A transgenic tobacco plant (Nicotiana tabacum L.) expressing a fungal pectin methylesterase (PME; EC 3.1.1.11) gene derived from a black filamentous fungus, Aspergillus niger was created. Fungal PME should have a wider range of adaptability to substrate pectin compared with plant PME. As expected, the proportion of me...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2004.04.015

    authors: Hasunuma T,Fukusaki E,Kobayashi A

    更新日期:2004-08-05 00:00:00

  • Random amplified polymorphic DNA analysis of genetically modified organisms.

    abstract::Randomly amplified polymorphic DNA (RAPD) was used to analyzed 78 samples comprises of certified reference materials (soya and maize powder), raw seeds (soybean and maize), processed food and animal feed. Combination assay of two arbitrary primers in the RAPD analysis enable to distinguish genetically modified organis...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2006.06.001

    authors: Yoke-Kqueen C,Radu S

    更新日期:2006-12-15 00:00:00

  • Extracellular transglycosylase and glyceraldehyde-3-phosphate dehydrogenase attributed to the anti-staphylococcal activity of Lactobacillus plantarum USM8613.

    abstract::Increasing levels of antibiotic resistance in pathogens, including Staphylococcus aureus, remains a serious problem for public health, leading to the need for better alternative antimicrobial strategies. The antimicrobial proteins produced by Lactobacillus plantarum USM8613 attributed to its anti-staphylococcal activi...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2019.05.006

    authors: Ong JS,Taylor TD,Wong CB,Khoo BY,Sasidharan S,Choi SB,Ohno H,Liong MT

    更新日期:2019-07-20 00:00:00

  • Aqueous release and purification of poly(beta-hydroxybutyrate) from Escherichia coli.

    abstract::The poly(beta-hydroxybutyrate) (PHB) biosynthetic genes of Ralstonia eutropha that are organized in a single operon (phaCAB) have been cloned in Escherichia coli, where the expression of the genes in the wild-type pha operon from plasmid pTZ18U-PHB leads to the formation of 50-80% PHB/celldry mass when the cells are g...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/s0168-1656(98)00127-8

    authors: Resch S,Gruber K,Wanner G,Slater S,Dennis D,Lubitz W

    更新日期:1998-10-27 00:00:00

  • Production of eicosapentaenoic acid by Nannochloropsis oculata: Effects of carbon dioxide and glycerol.

    abstract::The marine microalga Nannochloropsis oculata is a potential source of eicosapentaenoic acid (EPA, C20:5n3) and carotenoids for use in functional foods and nutraceuticals. Mixotrophic culture of N. oculata using glycerol was examined as a possible way of increasing the biomass and metabolite productivity relative to a ...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2016.10.006

    authors: Shene C,Chisti Y,Vergara D,Burgos-Díaz C,Rubilar M,Bustamante M

    更新日期:2016-12-10 00:00:00

  • Markerless genome editing in Clostridium beijerinckii using the CRISPR-Cpf1 system.

    abstract::CRISPR-Cpf1 is a type V CRISPR system that has recently been exploited for genome engineering purposes. Compared to the well-known Streptococcus pyogenes CRISPR-Cas9 system, the effector protein Cpf1 recognizes T-rich protospacer-adjacent motif (PAM) instead of G-rich PAM (used by CRISPR-Cas9), which could offer a sub...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2018.07.040

    authors: Zhang J,Hong W,Zong W,Wang P,Wang Y

    更新日期:2018-10-20 00:00:00

  • A game with many players: control of gdh transcription in Corynebacterium glutamicum.

    abstract::Glutamate dehydrogenase is a central enzyme connecting nitrogen and carbon metabolism via its precursors ammonium and oxoglutarate and its product glutamate. In Corynebacterium glutamicum glutamate dehydrogenase is especially important, since it is a key enzyme for the biotechnological production of the flavour enhanc...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2009.04.007

    authors: Hänssler E,Müller T,Palumbo K,Patek M,Brocker M,Krämer R,Burkovski A

    更新日期:2009-06-15 00:00:00

  • The C-terminal region controls correct folding of genus Trametes pyranose 2-oxidases.

    abstract::The pyranose 2-oxidases from Trametes ochracea and Trametes pubescens share markedly similar amino acid sequences with identity of 93.4%. When expressed from the recombinant plasmids based on the same vector in the Escherichia coli host strain BL21(DE3) at higher growth temperatures, they differ strikingly in the form...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2007.04.023

    authors: Maresová H,Palyzová A,Kyslík P

    更新日期:2007-06-30 00:00:00

  • Bacterial ghosts: non-living candidate vaccines.

    abstract::Expression of cloned PhiX174 gene E in bacteria results in lysis of bacteria. It is unique among phage lysis systems as it introduces a transmembrane tunnel structure through the cell envelope complex of Gram-negative bacteria. The resulting bacterial ghosts have intact envelope structures devoid of cytoplasmic conten...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/0168-1656(95)00123-9

    authors: Szostak MP,Hensel A,Eko FO,Klein R,Auer T,Mader H,Haslberger A,Bunka S,Wanner G,Lubitz W

    更新日期:1996-01-26 00:00:00

  • Innovative use of Mucuna monosperma (Wight) callus cultures for continuous production of melanin by using statistically optimized biotransformation medium.

    abstract::Melanins are predominantly indolic polymers which are having extensive applications in cosmetics, agriculture and medicine. In the present study, optimization of nutritional parameters influencing melanin production by Mucuna monosperma callus cultures was attempted using the response surface methodology (RSM). Standa...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2013.11.012

    authors: Inamdar S,Joshi S,Bapat V,Jadhav J

    更新日期:2014-01-20 00:00:00

  • A type 2 diacylglycerol acyltransferase accelerates the triacylglycerol biosynthesis in heterokont oleaginous microalga Nannochloropsis oceanica.

    abstract::Oleaginous microalgae have received a considerable attention as potential biofuel feedstock. However, lack of industry-suitable strain with lipid rich biomass limits its commercial applications. Targeted engineering of lipogenic pathways represents a promising strategy to enhance the efficacy of microalgal oil product...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2016.05.005

    authors: Li DW,Cen SY,Liu YH,Balamurugan S,Zheng XY,Alimujiang A,Yang WD,Liu JS,Li HY

    更新日期:2016-07-10 00:00:00

  • Purification and characterization of a new bioscouring pectate lyase from Bacillus pumilus BK2.

    abstract::An alkalophilic bacterium was isolated based on the potential of extra-cellular enzymes for bioscouring. The bacterium was identified as a new strain of Bacillus pumilus BK2 producing an extra-cellular endo-pectate lyase PL (EC 4.2.2.2). PL was purified to homogeneity in three steps and has a molecular mass of 37.3+/-...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2005.07.019

    authors: Klug-Santner BG,Schnitzhofer W,Vrsanská M,Weber J,Agrawal PB,Nierstrasz VA,Guebitz GM

    更新日期:2006-02-10 00:00:00

  • Antifungal and antibacterial activity of extracts produced from Diaporthe schini.

    abstract::The aim of this work was the production of bioactive metabolites by submerged fermentation from the fungus Diaporthe schini, followed by their extraction, separation and characterization. Different solvents (methanol, dichloromethane and hexane) were used for the extraction of metabolites from the fermentation broth a...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2019.01.022

    authors: Dos Reis CM,da Rosa BV,da Rosa GP,do Carmo G,Morandini LMB,Ugalde GA,Kuhn KR,Morel AF,Jahn SL,Kuhn RC

    更新日期:2019-03-20 00:00:00

  • The porcine gastrointestinal lamina propria: an appropriate target for mucosal immunisation?

    abstract::During the course of a lifetime, it has been calculated that we may consume between 100 and 700 tons of food. For the average British citizen, this is likely to include some 550 poultry, 36 pigs, 36 sheep, eight oxen, 10000 eggs and dairy products (milk, butter cheese, etc.) equivalent to 18 tonnes of milk. As if that...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/s0168-1656(00)00299-6

    authors: Stokes CR,Bailey M

    更新日期:2000-09-29 00:00:00

  • Heterologous expression, purification and characterisation of the extracellular domain of trypanosome invariant surface glycoprotein ISG75.

    abstract::The invariant surface glycoprotein ISG75 is a transmembrane glycoprotein occurring on the surface of the bloodstream-form Trypanozoon. This study describes the expression and purification of the N-terminal extracellular domain of ISG75, a novel target for development of diagnostic tests for trypanosomosis. To facilita...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2008.04.012

    authors: Tran T,Büscher P,Vandenbussche G,Wyns L,Messens J,De Greve H

    更新日期:2008-06-30 00:00:00

  • First complete genome sequence of Bacillus glycinifermentans B-27.

    abstract::The first complete genome sequence of Bacillus glycinifermentans B-27 was determined by SMRT sequencing generating a genome sequence with a total length of 4,607,442 bases. Based on this sequence 4738 protein-coding sequences were predicted and used to identify gene clusters that are related to the production of secon...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2017.04.021

    authors: Stadermann KB,Blom J,Borgmeier C,Sciberras N,Herbold S,Kipker M,Meurer G,Molck S,Petri D,Pelzer S,Schneider J

    更新日期:2017-09-10 00:00:00

  • Antigen handling in the gastrointestinal lamina propria.

    abstract::Enteric infections associated with bacteria, viruses and parasites are a world health problem accounting for at least one billion episodes of diarrhoea and up to 10 million deaths in the Third World each year. The widely held conclusion that responses which are protective in the gastrointestinal tract are best stimula...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/0168-1656(95)00114-X

    authors: Stokes CR,Bailey M

    更新日期:1996-01-26 00:00:00

  • Chemical stabilization of the phycocyanin from cyanobacterium Spirulina platensis.

    abstract::Phycocyanin (PC) prepared from a cyanobacterium Spirulina platensis by the DEAE-DE52 cellulose column chromatography that was developed by gradient elution of 50-250 mM phosphate buffer (pH 7.0) was stabilized by its subunits cross-linked covalently with formaldehyde. The single blue band that the chemically stabilize...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2005.08.017

    authors: Sun L,Wang S,Qiao Z

    更新日期:2006-02-24 00:00:00

  • Rapid and quantitative analysis of recombinant protein expression using pyrolysis mass spectrometry and artificial neural networks: application to mammalian cytochrome b5 in Escherichia coli.

    abstract::Recombinant Escherichia coli clones encoding between 0 and 6 copies of the mammalian cytochrome b5 gene were subjected to pyrolysis mass spectrometry (PyMS). To deconvolute the pyrolysis mass spectra so as to obtain quantitative information on the amount of cytochrome b5 produced fully-interconnected feedforward artif...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/0168-1656(94)90088-4

    authors: Goodacre R,Karim A,Kaderbhai MA,Kell DB

    更新日期:1994-05-15 00:00:00

  • Molecular cloning and expression in yeast of caprine prochymosin.

    abstract::We cloned and characterized a preprochymosin cDNA from the abomasum of milk-fed kid goats. This cDNA contained an open reading frame that predicts a polypeptide of 381 amino acid residues, with a signal peptide and a proenzyme region of 16 and 42 amino acids, respectively. Comparison of the caprine preprochymosin sequ...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2004.06.002

    authors: Vega-Hernández MC,Gómez-Coello A,Villar J,Claverie-Martín F

    更新日期:2004-10-19 00:00:00

  • Cosmix-plexing: a novel recombinatorial approach for evolutionary selection from combinatorial libraries.

    abstract::The efficiency of existing combinatorial biological library methods has been moderate in terms of the success rates, the affinities of the ligands selected and the time and effort involved in trying to optimize the initial leads. Although mimicking natural evolution, existing strategies take little notice of the impor...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/s1389-0352(01)00019-8

    authors: Collins J,Horn N,Wadenbäck J,Szardenings M

    更新日期:2001-06-01 00:00:00

  • Complete genome sequence of Paenibacillus riograndensis SBR5(T), a Gram-positive diazotrophic rhizobacterium.

    abstract::Paenibacillus riograndensis is a Gram-positive rhizobacterium which exhibits plant growth promoting activities. It was isolated from the rhizosphere of wheat grown in the state of Rio Grande do Sul, Brazil. Here we announce the complete genome sequence of P. riograndensis strain SBR5(T). The genome of P. riograndensis...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2015.04.025

    authors: Brito LF,Bach E,Kalinowski J,Rückert C,Wibberg D,Passaglia LM,Wendisch VF

    更新日期:2015-08-10 00:00:00

  • Hydrophobicity engineering to facilitate surface display of heterologous gene products on Staphylococcus xylosus.

    abstract::Protein engineering has been employed to investigate the effect of specific amino acid changes on the targeting of heterologous proteins to the outer cell surface of the Gram-positive bacterium Staphylococcus xylosus. Three different variants, corresponding to a 101 amino acid region of the major glycoprotein (G prote...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/0168-1656(95)00081-z

    authors: Nguyen TN,Gourdon MH,Hansson M,Robert A,Samuelson P,Libon C,Andréoni C,Nygren PA,Binz H,Uhlén M

    更新日期:1995-10-16 00:00:00

  • Identification of RNF2-responding loci in long-range chromatin interactions using the novel 4C-ChIP-Cloning technology.

    abstract::RNF2 is a core component of Polycomb repressive complex 1 (PRC1), which binds to various chromatic regions to regulate their transcriptional activity. It was recently reported that EZH2, a Polycomb group complex member, helps mediate long-range chromosomal interactions in mammalian cells. The present study investigate...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2011.01.001

    authors: Choi D,Goo HG,Yoo J,Kang S

    更新日期:2011-02-20 00:00:00

  • An efficient gene transfer system for hematopoietic cell line using transient and stable vectors.

    abstract::The hematopoietic system represents an interesting model for gene transfer protocols. Here, we have evaluated the efficiency of a gene transfer system using the polycationic compound SuperFect (Qiagen) and the K562 hematopoietic cell line. Transient and stable vectors carrying the enhanced green fluorescent protein (E...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/s0168-1656(01)00276-0

    authors: Teixeira LA,Fricke CH,Bonorino CB,Bogo MR,Nardi NB

    更新日期:2001-06-15 00:00:00

  • Purification and characterization of recombinant human interleukin-29 expressed in Escherichia coli.

    abstract::Human interleukin (IL)-29 is the latest member of the class II cytokine family. However, as a result of lacking efficient method to generate relatively large quantity of IL-29, little is known of its functions in man. In the present study, an Escherichia coli expression system for the rapid expression of the human IL-...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2005.11.019

    authors: Li M,He S

    更新日期:2006-04-10 00:00:00

  • Mechanistic understanding of the cysteine capping modifications of antibodies enables selective chemical engineering in live mammalian cells.

    abstract::Protein modifications by intricate cellular machineries often redesign the structure and function of existing proteins to impact biological networks. Disulfide bond formation between cysteine (Cys) pairs is one of the most common modifications found in extracellularly-destined proteins, key to maintaining protein stru...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2017.03.006

    authors: Zhong X,He T,Prashad AS,Wang W,Cohen J,Ferguson D,Tam AS,Sousa E,Lin L,Tchistiakova L,Gatto S,D'Antona A,Luan YT,Ma W,Zollner R,Zhou J,Arve B,Somers W,Kriz R

    更新日期:2017-04-20 00:00:00

  • Preparation of a reversible soluble-insoluble β-d-Glucosidase with perfect stability and activity.

    abstract::Rebuilding enzymes with high activities, stability and reusability has been constantly pursued for application of enzymaticcatalysis in wide field. Rebuilding enzymes by chemical approaches, including immobilization and chemicalmodification, represents a simple but effective route. Here, a class of highly stable and a...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2018.12.014

    authors: Li L,Li H,Yan B,Yu S

    更新日期:2019-02-10 00:00:00

  • Molecular recognition of esterase plays a major role on the removal of fatty soils during detergency.

    abstract::In this work it is describe for the first time, the use of an esterase with null activity (Tfu_0883 bacterial cutinase from Thermobifida fusca) on the removal of fat from the surface of a cotton substrate. Similar levels of fat removal were found for both null and wild-type proteins, despite that only wild type protei...

    journal_title:Journal of biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.jbiotec.2012.06.019

    authors: Silva C,Azoia NG,Martins M,Matamá T,Wu J,Cavaco-Paulo A

    更新日期:2012-10-31 00:00:00