New mechanistic insights into pre-protein transport across the second outermost plastid membrane of diatoms.

Abstract:

:Chromalveolates like the diatom Phaeodactylum tricornutum arose through the uptake of a red alga by a phagotrophic protist, a process termed secondary endosymbiosis. In consequence, the plastids are surrounded by two additional membranes compared with primary plastids. This plastid morphology poses additional barriers for plastid-destined proteins, which are mostly nucleus-encoded. Recent investigations have focused on the postulated translocon of the second outermost membrane (periplastidal membrane, PPM). These studies identified a symbiont-specific ERAD (endoplasmic reticulum-associated degradation)-like machinery (SELMA), which has been implicated in plastid pre-protein import. Despite this recent progress, key factors for protein transport via SELMA are still unknown. As SELMA substrates presumably undergo ubiquitination, a corresponding ubiquitin ligase and an enzyme for the subsequent removal of ubiquitin need to reside in the space between the second and third membrane (periplastidal compartment, PPC). Here we characterize two proteins fulfilling these criteria. We show that ptE3P (P.t ricornutumE3 enzyme of the PPC), the ubiquitin ligase, and ptDUP (P.t ricornutumde-ubiquitinating enzyme of the PPC), the de-ubiquitinase, localize to the PPM and PPC, respectively. In addition, we demonstrate their retained functionality by in vitro data.

journal_name

Mol Microbiol

journal_title

Molecular microbiology

authors

Hempel F,Felsner G,Maier UG

doi

10.1111/j.1365-2958.2010.07142.x

subject

Has Abstract

pub_date

2010-05-01 00:00:00

pages

793-801

issue

3

eissn

0950-382X

issn

1365-2958

pii

MMI7142

journal_volume

76

pub_type

杂志文章
  • Repression of tonB transcription during anaerobic growth requires Fur binding at the promoter and a second factor binding upstream.

    abstract::Although iron is an essential nutrient, its toxicity at high levels necessitates regulated transport. In Gram-negative bacteria a central target for regulation is the TonB protein, an energy transducer that couples the cytoplasmic membrane proton motive force to active transport of (FeIII)-siderophore complexes across...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.1994.tb00373.x

    authors: Young GM,Postle K

    更新日期:1994-03-01 00:00:00

  • A small non-coding RNA of the invasion gene island (SPI-1) represses outer membrane protein synthesis from the Salmonella core genome.

    abstract::The Salmonella pathogenicity island (SPI-1) encodes approximately 35 proteins involved in assembly of a type III secretion system (T3SS) which endows Salmonella with the ability to invade eukaryotic cells. We have discovered a novel SPI-1 gene, invR, which expresses an abundant small non-coding RNA (sRNA). The invR ge...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2007.05991.x

    authors: Pfeiffer V,Sittka A,Tomer R,Tedin K,Brinkmann V,Vogel J

    更新日期:2007-12-01 00:00:00

  • Visualization of the subcellular location of sporulation proteins in Bacillus subtilis using immunofluorescence microscopy.

    abstract::We describe the application of immunofluorescence microscopy to visualization of the subcellular localization of proteins involved in coat morphogenesis and chromosome packaging during the process of sporulation in Bacillus subtilis. In confirmation and extension of previous findings, we show that SpolVA, which is res...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.1995.mmi_18030459.x

    authors: Pogliano K,Harry E,Losick R

    更新日期:1995-11-01 00:00:00

  • Phase variation controls expression of Salmonella lipopolysaccharide modification genes by a DNA methylation-dependent mechanism.

    abstract::The O-antigen of Salmonella lipopolysaccharide is a major antigenic determinant and its chemical composition forms the basis for Salmonella serotyping. Modifications of the O-antigen that can affect the serotype include those carried out by the products of glycosyltransferase operons (gtr), which are present on specif...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2010.07203.x

    authors: Broadbent SE,Davies MR,van der Woude MW

    更新日期:2010-07-01 00:00:00

  • Elongation factor Tu and E1 beta subunit of pyruvate dehydrogenase complex act as fibronectin binding proteins in Mycoplasma pneumoniae.

    abstract::The interactions between pathogenic bacteria and extracellular matrix (ECM) components markedly influence the initiation and establishment of infection. We have identified two surface proteins of virulent Mycoplasma pneumoniae with molecular masses of 45 and 30 kDa that bind to the ECM constituent, fibronectin (Fn). T...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.2002.03207.x

    authors: Dallo SF,Kannan TR,Blaylock MW,Baseman JB

    更新日期:2002-11-01 00:00:00

  • Cysteine peptidases CPA and CPB are vital for autophagy and differentiation in Leishmania mexicana.

    abstract::In the past, ultrastructural investigations of Leishmania mexicana amastigotes revealed structures that were tentatively identified as autophagosomes. This study has now provided definitive data that autophagy occurs in the parasite during differentiation both to metacyclic promastigotes and to amastigotes, autophagos...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2006.05274.x

    authors: Williams RA,Tetley L,Mottram JC,Coombs GH

    更新日期:2006-08-01 00:00:00

  • Recently differentiated epimastigotes from Trypanosoma cruzi are infective to the mammalian host.

    abstract::Trypanosoma cruzi, the etiologic agent of Chagas disease, has a complex life cycle in which four distinct developmental forms alternate between the insect vector and the mammalian host. It is assumed that replicating epimastigotes present in the insect gut are not infective to mammalian host, a paradigm corroborated b...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/mmi.13653

    authors: Kessler RL,Contreras VT,Marliére NP,Aparecida Guarneri A,Villamizar Silva LH,Mazzarotto GACA,Batista M,Soccol VT,Krieger MA,Probst CM

    更新日期:2017-06-01 00:00:00

  • Sequence, exon-intron organization, transcription and mutational analysis of prnA, the gene encoding the transcriptional activator of the prn gene cluster in Aspergillus nidulans.

    abstract::The prnA gene codes for a transcriptional activator that mediates proline induction of four other genes involved in proline utilization as a nitrogen and/or carbon source in Aspergillus nidulans. In this paper, we present the genomic and cDNA sequence and the transcript map of prnA. The PrnA protein belongs to the Zn ...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.1998.00801.x

    authors: Cazelle B,Pokorska A,Hull E,Green PM,Stanway G,Scazzocchio C

    更新日期:1998-04-01 00:00:00

  • Structural and mutational analysis of the cell division protein FtsQ.

    abstract::Bacterial cytokinesis requires the divisome, a complex of proteins that co-ordinates the invagination of the cytoplasmic membrane, inward growth of the peptidoglycan layer and the outer membrane. Assembly of the cell division proteins is tightly regulated and the order of appearance at the future division site is well...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2008.06141.x

    authors: van den Ent F,Vinkenvleugel TM,Ind A,West P,Veprintsev D,Nanninga N,den Blaauwen T,Löwe J

    更新日期:2008-04-01 00:00:00

  • Use of recombinase gene fusions to identify Vibrio cholerae genes induced during infection.

    abstract::A complete understanding of host-parasite interactions must necessarily include the identification and characterization of gene products expressed by both parties during the infectious process. We have developed a new screen to identify bacterial genes that are transcriptionally induced during infection of a host anim...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.1995.mmi_18040671.x

    authors: Camilli A,Mekalanos JJ

    更新日期:1995-11-01 00:00:00

  • Clonally variant gene families in Plasmodium falciparum share a common activation factor.

    abstract::The genome of the malaria parasite Plasmodium falciparum contains several multicopy gene families, including var, rifin, stevor and Pfmc-2TM. These gene families undergo expression switching and appear to play a role in antigenic variation. It has recently been shown that forcing parasites to express high copy numbers...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2009.06846.x

    authors: Howitt CA,Wilinski D,Llinás M,Templeton TJ,Dzikowski R,Deitsch KW

    更新日期:2009-09-01 00:00:00

  • The copper supply pathway to a Salmonella Cu,Zn-superoxide dismutase (SodCII) involves P(1B)-type ATPase copper efflux and periplasmic CueP.

    abstract::Periplasmic Cu,Zn-superoxide dismutases (Cu,Zn-SODs) are implicated in bacterial virulence. It has been proposed that some bacterial P(1B)-type ATPases supply copper to periplasmic cupro-proteins and such transporters have also been implicated in virulence. Here we show that either of two P(1B)-type ATPases, CopA or G...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/mmi.12107

    authors: Osman D,Patterson CJ,Bailey K,Fisher K,Robinson NJ,Rigby SE,Cavet JS

    更新日期:2013-02-01 00:00:00

  • Dynamics of cell wall components of Magnaporthe grisea during infectious structure development.

    abstract::Oligosaccharides derived from cell wall of fungal pathogens induce host primary immune responses. To understand fungal strategies circumventing the host plant immune responses, cell wall polysaccharide localization was investigated using fluorescent labels during infectious structure differentiation in the rice blast ...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2009.06786.x

    authors: Fujikawa T,Kuga Y,Yano S,Yoshimi A,Tachiki T,Abe K,Nishimura M

    更新日期:2009-08-01 00:00:00

  • In vitro selection of miltefosine resistance in promastigotes of Leishmania donovani from Nepal: genomic and metabolomic characterization.

    abstract::In this study, we followed the genomic, lipidomic and metabolomic changes associated with the selection of miltefosine (MIL) resistance in two clinically derived Leishmania donovani strains with different inherent resistance to antimonial drugs (antimony sensitive strain Sb-S; and antimony resistant Sb-R). MIL-R was e...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/mmi.13291

    authors: Shaw CD,Lonchamp J,Downing T,Imamura H,Freeman TM,Cotton JA,Sanders M,Blackburn G,Dujardin JC,Rijal S,Khanal B,Illingworth CJ,Coombs GH,Carter KC

    更新日期:2016-03-01 00:00:00

  • MexAB-OprM hyperexpression in NalC-type multidrug-resistant Pseudomonas aeruginosa: identification and characterization of the nalC gene encoding a repressor of PA3720-PA3719.

    abstract::MexAB-OprM is a multidrug efflux system that contributes to intrinsic and acquired multidrug resistance in Pseudomonas aeruginosa, the latter as a result of mutational hyperexpression of the mexAB-oprM operon. While efflux gene hyperexpression typically results from mutations in the linked mexR repressor gene, it also...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2004.04210.x

    authors: Cao L,Srikumar R,Poole K

    更新日期:2004-09-01 00:00:00

  • Cell wall-inhibitory antibiotics activate the alginate biosynthesis operon in Pseudomonas aeruginosa: Roles of sigma (AlgT) and the AlgW and Prc proteases.

    abstract::A bioassay was developed to identify stimuli that promote the transcriptional induction of the algD operon for alginate biosynthesis in Pseudomonas aeruginosa. Strain PAO1 carried the algD promoter fused to a chloramphenicol acetyl-transferase cartridge (PalgD-cat), and > 50 compounds were tested for promoting chloram...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2006.05390.x

    authors: Wood LF,Leech AJ,Ohman DE

    更新日期:2006-10-01 00:00:00

  • A family of genes encoding a cell-killing function may be conserved in all gram-negative bacteria.

    abstract::The relF gene in Escherichia coli is related to the hok gene on plasmid R1. Both genes encode small proteins which, when overexpressed in E. coli lead to collapse of the membrane potential and cell death. A third gene, designated gef, which encodes a homologous cell-toxic protein, has been isolated from E. coli DNA. B...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.1989.tb00131.x

    authors: Poulsen LK,Larsen NW,Molin S,Andersson P

    更新日期:1989-11-01 00:00:00

  • The telomere system of the Streptomyces linear plasmid SCP1 represents a novel class.

    abstract::Linear plasmids and chromosomes of Streptomyces carry terminal proteins (TPs) covalently attached to the 5' ends of the DNA. Most known telomeres are conserved in primary sequence and in the potential secondary structures formed during replication. The TP that caps these telomeres is also highly conserved and its codi...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2007.05616.x

    authors: Huang CH,Tsai HH,Tsay YG,Chien YN,Wang SL,Cheng MY,Ke CH,Chen CW

    更新日期:2007-03-01 00:00:00

  • Gene-specific requirement of RNA polymerase II CTD phosphorylation.

    abstract::The largest subunit of RNA polymerase II, Rpb1, contains an unusual C-terminal domain (CTD) composed of numerous repeats of the YSPTSPS consensus sequence. This sequence is the target of post-translational modifications such as phosphorylation, glycosylation, methylation and transitions between stereoisomeric states, ...

    journal_title:Molecular microbiology

    pub_type: 杂志文章,评审

    doi:10.1111/j.1365-2958.2012.08071.x

    authors: Drogat J,Hermand D

    更新日期:2012-06-01 00:00:00

  • Identification of competence pheromone responsive genes in Streptococcus pneumoniae by use of DNA microarrays.

    abstract::Natural genetic transformation in Streptococcus pneumoniae is controlled in part by a quorum-sensing system mediated by a peptide pheromone called competence-stimulating peptide (CSP), which acts to coordinate transient activation of genes required for competence. To characterize the transcriptional response and regul...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.2003.03907.x

    authors: Peterson SN,Sung CK,Cline R,Desai BV,Snesrud EC,Luo P,Walling J,Li H,Mintz M,Tsegaye G,Burr PC,Do Y,Ahn S,Gilbert J,Fleischmann RD,Morrison DA

    更新日期:2004-02-01 00:00:00

  • The frequency of expression of pyelonephritis-associated pili is under regulatory control.

    abstract::The Escherichia coli urinary tract isolate C1212 contains two pyelonephritis-associated pili (pap) DNA sequences designated here as pap-17 and pap-21. Each of these pap sequences encodes antigenically-distinct pilin monomers, pilin-17 and pilin-21, respectively. Most individual strain C1212 cells isolated from a singl...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.1987.tb01940.x

    authors: Low D,Robinson EN Jr,McGee ZA,Falkow S

    更新日期:1987-11-01 00:00:00

  • Cloning and sequence analysis of linear plasmid telomeres of the bacterium Borrelia burgdorferi.

    abstract::Borrelia burgdorferi, the Lyme disease agent, has double-stranded linear plasmids with covalently closed ends. DNA at the ends, or telomeres, of two linear plasmids of B. burgdorferi strain B31 was examined. Telomeric sequences from both ends of a 16 kb linear plasmid and from one end of a 49 kb linear plasmid were cl...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.1990.tb00651.x

    authors: Hinnebusch J,Bergström S,Barbour AG

    更新日期:1990-05-01 00:00:00

  • Characterization of the 26S rRNA-binding domain in Saccharomyces cerevisiae ribosomal stalk phosphoprotein P0.

    abstract::The stalk is a universal structure of the large ribosomal subunit involved in the function of translation factors. The bacterial stalk is highly stable but its stability is notably reduced in eukaryotes, favouring a translation regulatory activity of this ribosomal domain, which has not been reported in prokaryotes. T...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2005.04816.x

    authors: Santos C,Ballesta JP

    更新日期:2005-10-01 00:00:00

  • Single-cell characterization of metabolic switching in the sugar phosphotransferase system of Escherichia coli.

    abstract::The utilization of several sugars in Escherichia coli is regulated by the Phosphotransferase System (PTS), in which diverse sugar utilization modules compete for phosphoryl flux from the general PTS proteins. Existing theoretical work predicts a winner-take-all outcome when this flux limits carbon uptake. To date, no ...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/mmi.13329

    authors: Westermayer SA,Fritz G,Gutiérrez J,Megerle JA,Weißl MP,Schnetz K,Gerland U,Rädler JO

    更新日期:2016-05-01 00:00:00

  • Crl stimulates RpoS activity during stationary phase.

    abstract::RpoS, an alternative primary sigma factor, has been shown to be regulated at multiple levels, including transcription, translation and protein stability. Here, we present evidence that suggests that RpoS is regulated at yet another level by the product of the crl gene. The crl gene was first thought to encode the majo...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.1998.01007.x

    authors: Pratt LA,Silhavy TJ

    更新日期:1998-09-01 00:00:00

  • Multiple drug resistance genes in malaria -- from epistasis to epidemiology.

    abstract::A decline in our ability to successfully treat patients with malaria infections of the parasitic protozoan Plasmodium falciparum with cheap quinoline drugs has led to a huge escalation in morbidity and mortality in recent years. Many approaches have been taken, including classical genetics, reverse genetics and molecu...

    journal_title:Molecular microbiology

    pub_type: 评论,杂志文章,评审

    doi:10.1111/j.1365-2958.2005.04748.x

    authors: Duraisingh MT,Refour P

    更新日期:2005-08-01 00:00:00

  • A novel siderophore-independent strategy of iron uptake in the genus Burkholderia.

    abstract::Like many other bacteria, Burkholderia sp. take up iron in its ferric form via siderophore-dependent transporters. We observed that mutant strains of B. cenocepacia H111 unable to synthesize siderophores did not exhibit any growth defect under iron limited conditions. This finding suggested that this opportunistic pat...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/mmi.12499

    authors: Mathew A,Eberl L,Carlier AL

    更新日期:2014-02-01 00:00:00

  • Reprogramming the infection mechanism of a filamentous phage.

    abstract::When they infect Escherichia coli cells, the filamentous phages IF1 and fd first interact with a pilus and then target TolA as their common receptor. They use the domains N2 and N1 of their gene-3-proteins (G3P) for these interactions but differ in the mechanism of infection. In G3P of phage IF1, N1 and N2 are indepen...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2011.07617.x

    authors: Lorenz SH,Schmid FX

    更新日期:2011-05-01 00:00:00

  • Identification of Pseudomonas syringae pv. tomato genes induced during infection of Arabidopsis thaliana.

    abstract::Phytopathogenic bacteria possess a large number of genes that allow them to grow and cause disease on plants. Many of these genes should be induced when the bacteria come in contact with plant tissue. We used a modified in vivo expression technology (IVET) approach to identify genes from the plant pathogen Pseudomonas...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.2002.02877.x

    authors: Boch J,Joardar V,Gao L,Robertson TL,Lim M,Kunkel BN

    更新日期:2002-04-01 00:00:00

  • Coupling gene expression and multicellular morphogenesis during fruiting body formation in Myxococcus xanthus.

    abstract::A recurring theme in morphogenesis is the coupling of the expression of genes that drive morphogenesis and the morphogenetic process per se. This coupling ensures that gene expression and morphogenesis are carried out in synchrony. Morphogenesis of the spore-filled fruiting bodies in Myxococcus xanthus illustrates thi...

    journal_title:Molecular microbiology

    pub_type: 杂志文章,评审

    doi:10.1046/j.1365-2958.2003.03399.x

    authors: Søgaard-Andersen L,Overgaard M,Lobedanz S,Ellehauge E,Jelsbak L,Rasmussen AA

    更新日期:2003-04-01 00:00:00