Heterologous expression of cDNAs encoding Chlorella sorokiniana NADP-specific glutamate dehydrogenase wild-type and mutant subunits in Escherichia coli cells and comparison of kinetic and thermal stability properties of their homohexamers.

Abstract:

:Full-length cDNAs encoding the alpha- and beta-subunits and a truncated mutant subunit of the Chlorella sorokiniana NADP-GDH isozymes were constructed and expressed in Escherichia coli cells. The kinetic and thermal stability properties of the resultant homohexamers were examined. The electrophoretic mobility of the recombinant alpha- and beta-subunits was identical to that of the native subunits as determined by immunoblotting. The homohexamers were purified by anion-exchange and gel-filtration chromatography. The alpha- and beta-homohexamers that were synthesized in the bacterial cells were shown to have similar Michaelis constants for their substrates as previously shown after synthesis in C. sorokiniana cells (Bascomb and Schmidt, 1987). The alpha homohexamer synthesized in the bacterium was allosteric with respect to NADPH but to a lesser degree than when isolated from the alga. The mutant homohexamer was composed of subunits that were truncated by 40 amino acids at their N-termini. This mutant isozyme was kinetically similar to the larger, anabolic alpha-homohexamer, but it did not display the allosteric response to NADPH shown by the alpha-homohexamer. The three isozymes had significant thermal tolerance and were stable at 50 degrees C. The temperature optimum for catalytic activity for the alpha- and beta-homohexamers was 60 degrees C, and 65 degrees C for the delta40N homohexamer. This study demonstrated that most of the kinetic properties of the Chlorella sorokiniana NADP-GDH isozymes were retained after their synthesis in a heterologous system, and that the distinctive N-terminal domains of these isozymes have dramatic effects on their biochemical characteristics.

journal_name

Plant Mol Biol

journal_title

Plant molecular biology

authors

Lawit SJ,Miller PW,Dunn WI,Mirabile JS,Schmidt RR

doi

10.1023/a:1024822312038

subject

Has Abstract

pub_date

2003-06-01 00:00:00

pages

605-16

issue

3

eissn

0167-4412

issn

1573-5028

journal_volume

52

pub_type

杂志文章
  • Cloning of two gibberellin-regulated cDNAs from Arabidopsis thaliana by subtractive hybridization: expression of the tonoplast water channel, gamma-TIP, is increased by GA3.

    abstract::The Arabidopsis ga1 mutant has very low levels of endogenous, active gibberellins and thus has an extreme dwarf phenotype; application of GA3 induces stem elongation and flower development. To test the hypothesis that GA action in this system involves changes in gene expression, we have cloned mRNAs whose abundance ch...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/BF00023557

    authors: Phillips AL,Huttly AK

    更新日期:1994-02-01 00:00:00

  • Three differentially expressed S-adenosylmethionine synthetases from Catharanthus roseus: molecular and functional characterization.

    abstract::We describe the molecular and functional characterization of three closely related S-adenosyl-L-methionine synthetase (SAMS) isoenzymes from Catharanthus roseus (Madagascar periwinkle). The genes are differentially expressed in cell cultures during growth of the culture and after application of various stresses (elici...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1023/a:1005711720930

    authors: Schröder G,Eichel J,Breinig S,Schröder J

    更新日期:1997-01-01 00:00:00

  • Fluorescent in situ hybridization to soybean metaphase chromosomes.

    abstract::Repetitive DNA sequences were detected directly on somatic metaphase chromosome spreads from soybean root tips using fluorescent in situ hybridization. Methods to spread the forty small metaphase chromosomes substantially free of cellular material were developed using protoplasts. The specific DNA probe was a 1.05 kb ...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/BF00036810

    authors: Griffor MC,Vodkin LO,Singh RJ,Hymowitz T

    更新日期:1991-07-01 00:00:00

  • HLMethy: a machine learning-based model to identify the hidden labels of m6A candidates.

    abstract:KEY MESSAGE:We developed a machine learning-based model to identify the hidden labels of m6A candidates from noisy m6A-seq data. Peak-calling approaches, such as MeRIP-seq or m6A-seq, are commonly used to map m6A modifications. However, these technologies can only map m6A sites with 100-200 nt resolution and cannot rev...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/s11103-019-00930-x

    authors: Liu Z,Dong W,Luo W,Jiang W,Li Q,He Z

    更新日期:2019-12-01 00:00:00

  • Synthesis versus degradation: directions of amino acid metabolism during Arabidopsis abiotic stress response.

    abstract:KEY MESSAGE:During abiotic stress low abundant amino acids are not synthesized but they accumulate due to increased protein turnover under conditions inducing carbohydrate starvation (dehydration, salt stress, darkness) and are degraded. Metabolic adaptation is crucial for abiotic stress resistance in plants, and accum...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/s11103-018-0767-0

    authors: Hildebrandt TM

    更新日期:2018-09-01 00:00:00

  • Comparative analysis of the nucleosomal structure of rye, wheat and their relatives.

    abstract::Analysis of the structure of chromatin in cereal species using micrococcal nuclease (MNase) cleavage showed nucleosomal organization and a ladder with typical nucleosomal spacing of 175-185 bp. Probing with a set of DNA probes localized in the authentic telomeres, subtelomeric regions and bulk chromatin revealed that ...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1023/a:1005912822671

    authors: Vershinin AV,Heslop-Harrison JS

    更新日期:1998-01-01 00:00:00

  • Expression and stability of amplified genes encoding 5-enolpyruvylshikimate-3-phosphate synthase in glyphosate-tolerant tobacco cells.

    abstract::Two distinct cDNAs for 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) were obtained from a glyphosate-tolerant tobacco cell line. The cDNAs were 89% identical and the predicted sequences of the mature proteins were greater than 83% identical with EPSPS proteins from other plants. Tobacco EPSPS proteins were more ...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/BF00028730

    authors: Wang YX,Jones JD,Weller SC,Goldsbrough PB

    更新日期:1991-12-01 00:00:00

  • The molecular characterization of transport vesicles.

    abstract::Secretion, endocytosis and transport to the lytic compartment are fundamental, highly coordinated features of the eukaryotic cell. These intracellular transport processes are facilitated by vesicles, many of which are small (100 nm or less in diameter) and 'coated' on their cytoplasmic surface. Research into the struc...

    journal_title:Plant molecular biology

    pub_type: 杂志文章,评审

    doi:

    authors: Robinson DG,Hinz G,Holstein SE

    更新日期:1998-09-01 00:00:00

  • The Arabidopsis thaliana carboxyl-terminal domain phosphatase-like 2 regulates plant growth, stress and auxin responses.

    abstract::More than 20 genes in the Arabidopsis genome encode proteins similar to phosphatases that act on the carboxyl-terminal domain (CTD) of RNA polymerase II. One of these CTD-phosphatase-like (CPL) proteins, CPL2, dephosphorylates CTD-Ser5-PO4 in an intact RNA polymerase II complex and contains a double-stranded (ds)-RNA-...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/s11103-008-9348-y

    authors: Ueda A,Li P,Feng Y,Vikram M,Kim S,Kang CH,Kang JS,Bahk JD,Lee SY,Fukuhara T,Staswick PE,Pepper AE,Koiwa H

    更新日期:2008-08-01 00:00:00

  • Temporally regulated expression of a yeast invertase in potato tubers allows dissection of the complex metabolic phenotype obtained following its constitutive expression.

    abstract::The constitutive cytosolic expression of a yeast ( Saccharomyces cerevisiae ) invertase within potato ( Solanum tuberosum ) tubers has previously been documented to produce a dramatic metabolic phenotype in which glycolysis, respiration and amino acid synthesis are markedly enhanced at the cost of starch synthesis. Th...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/s11103-004-2525-8

    authors: Junker BH,Wuttke R,Tiessen A,Geigenberger P,Sonnewald U,Willmitzer L,Fernie AR

    更新日期:2004-09-01 00:00:00

  • A maize histone deacetylase and retinoblastoma-related protein physically interact and cooperate in repressing gene transcription.

    abstract::In mammalian cells the product of the human retinoblastoma tumour suppressor gene (pRb) can recruit Rpd3-like histone deacetylases to repress transcription. In this study, we investigated whether this mechanism might also be relevant in plants and found both conserved and distinct features. The expression profiles of ...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1023/a:1022090916446

    authors: Rossi V,Locatelli S,Lanzanova C,Boniotti MB,Varotto S,Pipal A,Goralik-Schramel M,Lusser A,Gatz C,Gutierrez C,Motto M

    更新日期:2003-02-01 00:00:00

  • High expression level of a gene coding for a chloroplastic amino acid selective channel protein is correlated to cold acclimation in cereals.

    abstract::A cold-regulated gene (cor tmc-ap3) coding for a putative chloroplastic amino acid selective channel protein was isolated from cold-treated barley leaves combining the differential display and the 5'-RACE techniques. Cor tmc-ap3 is expressed at low level under normal growing temperature, and its expression is strongly...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1023/a:1006375332677

    authors: Baldi P,Grossi M,Pecchioni N,Valè G,Cattivelli L

    更新日期:1999-09-01 00:00:00

  • Inheritance and effect on ripening of antisense polygalacturonase genes in transgenic tomatoes.

    abstract::The role of the cell wall hydrolase polygalacturonase (PG) during fruit ripening was investigated using novel mutant tomato lines in which expression of the PG gene has been down regulated by antisense RNA. Tomato plants were transformed with chimaeric genes designed to express anti-PG RNA constitutively. Thirteen tra...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/BF00028773

    authors: Smith CJ,Watson CF,Morris PC,Bird CR,Seymour GB,Gray JE,Arnold C,Tucker GA,Schuch W,Harding S

    更新日期:1990-03-01 00:00:00

  • Unusual sequence of an abscisic acid-inducible mRNA which accumulates late in Brassica napus seed development.

    abstract::We have analyzed the nucleotide sequence and accumulation of an mRNA which is prevalent in seeds of Brassica napus L. During normal development, the mRNA begins to accumulate during late embryogeny, is stored in dry seeds, and becomes undetectable in seedlings within 24 hours after imbibition. Moreover, abscisic acid ...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/BF00017579

    authors: Harada JJ,Delisle AJ,Baden CS,Crouch ML

    更新日期:1989-04-01 00:00:00

  • Molecular cloning and biochemical characterization of carbonic anhydrase from Populus tremula x tremuloides.

    abstract::A leaf cDNA library from hybrid aspen, Populus tremula x tremuloides, was constructed. From this two different cDNA clones, denoted CA1a and CA1b, encoding a chloroplastic carbonic anhydrase (CA) were isolated and DNA sequenced. Analysis of the deduced amino acid sequences showed that the isolated CAs belong to the be...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1023/a:1005849202731

    authors: Larsson S,Björkbacka H,Forsman C,Samuelsson G,Olsson O

    更新日期:1997-07-01 00:00:00

  • Characterization of a family of genes encoding a fruit-specific wound-stimulated protein of bell pepper (Capsicum annuum): identification of a new family of transposable elements.

    abstract::Using a fruit-specific cDNA as a probe we isolated and sequenced the two corresponding homologous genes (Sn-1 and Sn-2) of the bell pepper (Capsicum annuum) genome. Both genes have a single intron and numerous unusual long inverted repeat sequences. The introns share 87% homology and Sn-2 contains one 450 bp additiona...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/BF00032663

    authors: Pozueta-Romero J,Klein M,Houlné G,Schantz ML,Meyer B,Schantz R

    更新日期:1995-09-01 00:00:00

  • Over-expression of a seed specific hevein-like antimicrobial peptide from Pharbitis nil enhances resistance to a fungal pathogen in transgenic tobacco plants.

    abstract::Two hevein-like peptides from the seed of Pharbitis nil, designated Pharbitis nil antimicrobial peptide 1 (Pn-AMP1) and Pn-AMP2, had been purified previously. Both exhibit potent in vitro antifungal activity against a broad spectrum of phytopathogenic fungi. We now report the isolation of two cDNA clones, designated p...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1023/a:1019864222515

    authors: Koo JC,Chun HJ,Park HC,Kim MC,Koo YD,Koo SC,Ok HM,Park SJ,Lee SH,Yun DJ,Lim CO,Bahk JD,Lee SY,Cho MJ

    更新日期:2002-10-01 00:00:00

  • Complete sequence of the mitochondrial DNA of Chlamydomonas eugametos.

    abstract::The complete nucleotide sequence of the Chlamydomonas eugametos (Chlamydomonadales, Chlorophyceae, sensu Mattox and Stewart) mitochondrial genome has been determined (22,897 bp, 34.6% G + C). The genes identified in this circular-mapping genome include those for apocytochrome b, subunit 1 of the cytochrome oxidase com...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1023/a:1005995718091

    authors: Denovan-Wright EM,Nedelcu AM,Lee RW

    更新日期:1998-01-01 00:00:00

  • Functional analysis of a recently originating, atypical presequence: mitochondrial import and processing of GUS fusion proteins in transgenic tobacco and yeast.

    abstract::A gene family of at least five members encodes the tobacco mitochondrial Rieske Fe-S protein (RISP). To determine whether all five RISPs are translocated to mitochondria, fusion proteins containing the putative presequences of tobacco RISPs and Escherichia coli beta-glucuronidase (GUS) were expressed in transgenic tob...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/BF00020982

    authors: Huang J,Levings CS 3rd

    更新日期:1995-11-01 00:00:00

  • Degradation of the stress-responsive enzyme formate dehydrogenase by the RING-type E3 ligase Keep on Going and the ubiquitin 26S proteasome system.

    abstract:KEY MESSAGE:KEG is involved in mediating the proteasome-dependent degradation of FDH, a stress-responsive enzyme. The UPS may function to suppress FDH mediated stress responses under favorable growth conditions. Formate dehydrogenase (FDH) has been studied in bacteria and yeasts for the purpose of industrial applicatio...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/s11103-017-0691-8

    authors: McNeilly D,Schofield A,Stone SL

    更新日期:2018-02-01 00:00:00

  • The tomato brassinosteroid receptor BRI1 increases binding of systemin to tobacco plasma membranes, but is not involved in systemin signaling.

    abstract::The tomato wound signal systemin is perceived by a specific high-affinity, saturable, and reversible cell surface receptor. This receptor was identified as the receptor-like kinase SR160, which turned out to be identical to the brassinosteroid receptor BRI1. Recently, it has been shown that the tomato bri1 null mutant...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/s11103-009-9494-x

    authors: Malinowski R,Higgins R,Luo Y,Piper L,Nazir A,Bajwa VS,Clouse SD,Thompson PR,Stratmann JW

    更新日期:2009-07-01 00:00:00

  • Cytochrome P450 CYP71AT96 catalyses the final step of herbivore-induced phenylacetonitrile biosynthesis in the giant knotweed, Fallopia sachalinensis.

    abstract::The giant knotweed Fallopia sachalinensis (Polygonaceae) synthesizes phenylacetonitrile (PAN) from L-phenylalanine when infested by the Japanese beetle Popillia japonica or treated with methyl jasmonate (MeJA). Here we identified (E/Z)-phenylacetaldoxime (PAOx) as the biosynthetic precursor of PAN and identified a cyt...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/s11103-016-0459-6

    authors: Yamaguchi T,Noge K,Asano Y

    更新日期:2016-06-01 00:00:00

  • Targeted transcriptional repression using a chimeric TALE-SRDX repressor protein.

    abstract::Transcriptional activator-like effectors (TALEs) are proteins secreted by Xanthomonas bacteria when they infect plants. TALEs contain a modular DNA binding domain that can be easily engineered to bind any sequence of interest, and have been used to provide user-selected DNA-binding modules to generate chimeric nucleas...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/s11103-011-9866-x

    authors: Mahfouz MM,Li L,Piatek M,Fang X,Mansour H,Bangarusamy DK,Zhu JK

    更新日期:2012-02-01 00:00:00

  • An osmotin-like cryoprotective protein from the bittersweet nightshade Solanum dulcamara.

    abstract::Cold acclimation in plants is a polygenic phenomenon involving increased expression of several genes. The gene products participate either directly or indirectly towards increasing cold tolerance. Evidence of proteins having a direct effect on cold tolerance is emerging but limited. With isolated protoplasts from warm...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1023/a:1026599028063

    authors: Newton SS,Duman JG

    更新日期:2000-11-01 00:00:00

  • A pathogen-induced gene of barley encodes a HSP90 homologue showing striking similarity to vertebrate forms resident in the endoplasmic reticulum.

    abstract::The full-length nucleotide sequence of a barley (Hordeum vulgare L.) leaf mRNA, found to increase rapidly in amount during infection attempts by the powdery mildew fungus (Erysiphe graminis DC. ex Mérat), is reported. The mRNA encodes a polypeptide of 809 amino acid residues which, by sequence comparison, was identifi...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/BF00023606

    authors: Walther-Larsen H,Brandt J,Collinge DB,Thordal-Christensen H

    更新日期:1993-03-01 00:00:00

  • Caught in action: fine-scale plastome evolution in the parasitic plants of Cuscuta section Ceratophorae (Convolvulaceae).

    abstract:KEY MESSAGE:An exhaustive analysis of a group of closely related parasitic plants shows a predominantly gradual reduction in plastid genome composition and provides the most reduced plastomes in the genus Cuscuta. Parasitic plants have a diminished to completely absent reliance on photosynthesis, and are characterized ...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/s11103-019-00884-0

    authors: Banerjee A,Stefanović S

    更新日期:2019-08-01 00:00:00

  • A novel method to identify the DNA motifs recognized by a defined transcription factor.

    abstract::The interaction between a protein and DNA is involved in almost all cellular functions, and is vitally important in cellular processes. Two complementary approaches are used to detect the interactions between a transcription factor (TF) and DNA, i.e. the TF-centered or protein-DNA approach, and the gene-centered or DN...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/s11103-014-0234-5

    authors: Ji X,Wang L,Nie X,He L,Zang D,Liu Y,Zhang B,Wang Y

    更新日期:2014-11-01 00:00:00

  • Primer extension studies on alpha-amylase mRNAs in barley aleurone. I. Characterization and quantification of the transcripts.

    abstract::Primer extension was used to characterize alpha-amylase mRNAs from aleurone tissue of barley (Hordeum vulgare L. cv. Himalaya) grains. Two synthetic oligonucleotides, specific for the low-pI and high-pI alpha-amylase groups, were used as primers for synthesis of cDNA from total RNA preparations. Between them, these tw...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/BF00023427

    authors: Chandler PM,Huiet L

    更新日期:1991-04-01 00:00:00

  • Phenotypic and gene expression analyses of a ploidy series of maize inbred Oh43.

    abstract::Polyploidization has repeatedly occurred during plant evolution. Although autopolyploidy is the best model to characterize the polyploidization effects in a highly controlled manner, there are limited studies on autopolyploids compared to allopolyploids. To improve our understanding of autopolyploidy effects in maize,...

    journal_title:Plant molecular biology

    pub_type: 杂志文章

    doi:10.1007/s11103-010-9722-4

    authors: Yao H,Kato A,Mooney B,Birchler JA

    更新日期:2011-02-01 00:00:00

  • Roles of R2R3-MYB transcription factors in transcriptional regulation of anthocyanin biosynthesis in horticultural plants.

    abstract:KEY MESSAGE:This review contains functional roles of MYB transcription factors in the transcriptional regulation of anthocyanin biosynthesis in horticultural plants. This review describes potential uses of MYB TFs as tools for metabolic engineering for anthocyanin production. Anthocyanins (ranging from red to blue) are...

    journal_title:Plant molecular biology

    pub_type: 杂志文章,评审

    doi:10.1007/s11103-018-0771-4

    authors: Naing AH,Kim CK

    更新日期:2018-09-01 00:00:00