Identification and location on syndecan-1 core protein of the epitopes of B-B2 and B-B4 monoclonal antibodies.

Abstract:

:Using a phage display peptide library, we characterized the epitope of two monoclonal antibodies reacting with syndecan-1: B-B2 and B-B4. The identified epitopes QDIT, for B-B2, and LPEV, for B-B4, were found to align with residues 36-39 and 90-93 of the mature protein, respectively. In contrast to B-B4, the B-B2 epitope is close to a potential glycosaminoglycan attachment site. Since syndecan-1 is heavily glycosylated and post-translational modifications are cell type specific, these results might explain the differences observed in the reactivity pattern of B-B2 and B-B4 and suggest that these monoclonal antibodies are useful probes to study cell surface exposed syndecan-1.

journal_name

FEBS Lett

journal_title

FEBS letters

authors

Dore JM,Morard F,Vita N,Wijdenes J

doi

10.1016/s0014-5793(98)00310-x

subject

Has Abstract

pub_date

1998-04-10 00:00:00

pages

67-70

issue

1

eissn

0014-5793

issn

1873-3468

pii

S0014-5793(98)00310-X

journal_volume

426

pub_type

杂志文章
  • Synthesis and absolute configuration of optically pure enantiomers of a kappa-opioid receptor selective agonist.

    abstract::The enantiomers of U50,488, ligands highly selective for kappa-opioid receptors, have been prepared by a refined procedure and their optical purity demonstrated. The absolute configuration of (+)-trans-2-pyrrolidinyl-N-methylcyclohexylamine, a chemically versatile intermediate for synthesis of analogs of kappa-opioid ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(87)80315-0

    authors: DeCosta B,George C,Rothman RB,Jacobson AE,Rice KC

    更新日期:1987-11-02 00:00:00

  • CPP32 activation during dolichyl phosphate-induced apoptosis in U937 leukemia cells.

    abstract::Treatment of U937 cells with dolichyl phosphate led to an increase in the activity of the ICE family protease CPP32, accompanied with cleavage of pre-CPP32 to generate p17. Peptide inhibitors YVAD-cmk and Z-Asp-CH2-DCB (specific to ICE) and DEVD-CHO (specific to CPP32) blocked the dolichyl phosphate-induced apoptosis....

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(97)00763-1

    authors: Yokoyama Y,Okubo T,Ozawa S,Nagai F,Ushiyama K,Kano I,Shioda M,Kubo H,Takemura M,Namiki H,Yasugi E,Oshima M,Seyama Y,Kano K

    更新日期:1997-07-21 00:00:00

  • Identification and functional analysis of essential, conserved, housekeeping and duplicated genes.

    abstract::Gene conservation, duplication and constitutive expression are intricately linked and strong predictors of essentiality. Here, we introduce metrics based on diversity indices to measure gene conservation, duplication and constitutive expression and validate them by measuring their performance in prediction of essentia...

    journal_title:FEBS letters

    pub_type: 信件

    doi:10.1002/1873-3468.12192

    authors: Arun PV,Miryala SK,Chattopadhyay S,Thiyyagura K,Bawa P,Bhattacharjee M,Yellaboina S

    更新日期:2016-05-01 00:00:00

  • Reactivity of glutaredoxins 1, 2 and 3 from Escherichia coli and protein disulfide isomerase towards glutathionyl-mixed disulfides in ribonuclease A.

    abstract::We have examined the activity of protein disulfide isomerase (PDI) and glutaredoxin (Grx) 1, 2 and 3 from Escherichia coli to catalyze the cleavage of glutathionylated ribonuclease A (RNase-SG) by 1 mM GSH to yield reduced RNase. Apparent Km values for RNase-SG were similar, 2-10 microM, for Grx 1, 3 and PDI but Grx I...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(98)01698-6

    authors: Lundström-Ljung J,Vlamis-Gardikas A,Aslund F,Holmgren A

    更新日期:1999-01-25 00:00:00

  • Retinal dehydrogenase gene expression in stomach and small intestine of rats during postnatal development and in vitamin A deficiency.

    abstract::Retinal dehydrogenase (RALDH) catalyzes the oxidation of retinal to all-trans and 9-cis retinoic acid, which function as ligands controlling RAR and RXR nuclear receptor-signaling pathways. We have recently shown the expression of RALDH transcript in the stomach and small intestine by reverse transcription polymerase ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(98)00355-x

    authors: Bhat PV

    更新日期:1998-04-17 00:00:00

  • Apaf-1 localization is modulated indirectly by Bcl-2 expression.

    abstract::Apoptotic protease activating factor-1 (Apaf-1) is an adaptor molecule essential for caspase-9 activation. Subcellular analysis of Apaf-1 in NIH-3T3 fibroblasts and the immature murine B cell lymphoma WEHI-231 indicates that Apaf-1 is localized in the Golgi apparatus and cytoplasm. Bcl-2 overexpression in WEHI-231 cel...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(01)02629-1

    authors: Ruiz-Vela A,Albar JP,Martínez CA

    更新日期:2001-07-13 00:00:00

  • A TY1 element is inserted in the CYR1 control region of Saccharomyces cerevisiae strain AB320.

    abstract::Southern blotting using a 5'-proximal probe of the Saccharomyces cerevisiae CYR1 gene has revealed heterogeneity in laboratory strains. It is demonstrated that strain AB320 contains a Ty1 element inserted in the promoter region of CYR1. The Ty1 orientation suggests that transcription of CYR1 is initiated downstream fr...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(87)81227-9

    authors: Lenzen G,Masson P,Jacquemin JM,Danchin A

    更新日期:1987-07-13 00:00:00

  • A relationship between the starting secondary structure of recombinant porcine growth hormone solubilised from inclusion bodies and the yield of native (monomeric) protein after in vitro refolding.

    abstract::Recombinant porcine growth hormone (rPGH) was solubilised from inclusion bodies (IB's) using either 6 M guanidinium hydrochloride (GnHCl), 7.5 M urea or by a novel method using a cationic surfactant, cetyltrimethylammonium chloride (CTAC). Circular dichroism (CD) analysis of the secondary (2 degrees) structure of the ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(92)80661-y

    authors: Puri NK,Cardamone M

    更新日期:1992-07-06 00:00:00

  • Positive and negative regulation of JNK1 by protein kinase C and p42(MAP kinase) in adult rat hepatocytes.

    abstract::The role of protein kinase C (PKC) and p42(MAP kinase) signaling in the regulation of proliferation and apoptosis was investigated in freshly isolated and primary cultured rat hepatocytes. Acute treatment of freshly isolated hepatocytes with phenylephrine and EGF caused rapid phasic activations of p42(MAP kinase) and ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(97)00705-9

    authors: Jarvis WD,Auer KL,Spector M,Kunos G,Grant S,Hylemon P,Mikkelsen R,Dent P

    更新日期:1997-07-21 00:00:00

  • Inhibition of serum complement haemolytic activity by lipid vesicles containing phosphatidylserine.

    abstract::The effect of artificial model membranes on the complement system was investigated. Incubation of the model membranes with human serum resulted in consumption of complement haemolytic activity when phosphatidylserine-containing vesicles were used. The activation of the complement system appeared to proceed through the...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(86)80350-7

    authors: Comis A,Easterbrook-Smith SB

    更新日期:1986-03-03 00:00:00

  • Kinetics of oxidation of aliphatic and aromatic thiols by myeloperoxidase compounds I and II.

    abstract::Myeloperoxidase (MPO) is the most abundant protein in neutrophils and plays a central role in microbial killing and inflammatory tissue damage. Because most of the non-steroidal anti-inflammatory drugs and other drugs contain a thiol group, it is necessary to understand how these substrates are oxidized by MPO. We hav...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(98)01727-x

    authors: Burner U,Jantschko W,Obinger C

    更新日期:1999-01-29 00:00:00

  • Sequences both 5' and 3' to the transcription initiation site contribute to the ability of a mouse H-2 gene to respond to type I interferon.

    abstract::To investigate the cis-acting DNA elements that are involved in the regulation of class I major histocompatibility complex genes by interferon, several promoter fragments of the H-2Kk gene were linked to the reporter chloramphenicol acetyl transferase (CAT) gene, and the CAT expression was analyzed in stable transfect...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(88)81443-1

    authors: Pascucci A,Pannuti A,La Mantia G,Lania L

    更新日期:1988-01-04 00:00:00

  • MiRNA let-7g regulates skeletal myoblast motility via Pinch-2.

    abstract::Post-transcriptional regulation of gene expression by RNA-binding proteins and by small non-coding RNAs plays an important role in cell biology. Our previous results show that in murine skeletal myoblasts, the expression of Pinch-2, a focal adhesion remodeling factor that regulates cell motility, is repressed by an RN...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2014.02.057

    authors: Boudoukha S,Rivera Vargas T,Dang I,Kropp J,Cuvellier S,Gautreau A,Polesskaya A

    更新日期:2014-05-02 00:00:00

  • The heme auxotroph Caenorhabditis elegans can cleave the thioether bonds of c-type cytochromes.

    abstract::Heme is essential and synthesized via highly regulated processes. For this reason, most organisms strive to recycle it or acquire it from their environment. When heme is bound to proteins noncovalently, degradation of the polypeptide is sufficient to release it. However, in some hemoproteins, such as c-type cytochrome...

    journal_title:FEBS letters

    pub_type: 信件

    doi:10.1002/1873-3468.13006

    authors: Murphey AC,Mavridou DAI,Hodgkin J,Ferguson SJ

    更新日期:2018-03-01 00:00:00

  • Comparative characterization of Aedes 3-hydroxykynurenine transaminase/alanine glyoxylate transaminase and Drosophila serine pyruvate aminotransferase.

    abstract::This study describes the comparative analysis of two insect recombinant aminotransferases, Aedes aegypti 3-hydroxykynurenine (3-HK) transaminase/alanine glyoxylate aminotransferase (Ae-HKT/AGT) and Drosophila melanogaster serine pyruvate aminotransferase (Dm-Spat), which share 52% identity in their amino acid sequence...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(02)03229-5

    authors: Han Q,Li J

    更新日期:2002-09-11 00:00:00

  • Changes in the proportions of histone H1 subtypes in brain cortical neurons.

    abstract::Histone H1(0) is found in tissues with little or no cellular proliferation and has been shown to accumulate during cellular terminal differentiation. Two subtypes of H1(0), H1 a and H1 b, are present in any tissue where the protein has been detected. We report here the first evidence of an age-dependent change in the ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(87)81328-5

    authors: Piña B,Suau P

    更新日期:1987-01-05 00:00:00

  • Interaction of viper venom serine peptidases with thrombin receptors on human platelets.

    abstract::The serine peptidases, thrombocytin and PA-BJ, isolated from the venom of Bothrops atrox and Bothrops jararaca, respectively, induce platelet aggregation and granule secretion without clotting fibrinogen. The specific platelet aggregation activity of each enzyme was about 15 times lower than that of thrombin. This act...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(00)01803-2

    authors: Santos BF,Serrano SM,Kuliopulos A,Niewiarowski S

    更新日期:2000-07-21 00:00:00

  • Transcriptional regulation of murine NADP(+)-dependent methylenetetrahydrofolate dehydrogenase-cyclohydrolase-synthetase.

    abstract::The cytosolic NADP(+)-dependent methylenetetrahydrofolate dehydrogenase-methenyltetrahydrofolate cyclohydrolase-formyltetrahydrofolate synthetase is ubiquitously expressed in all mouse tissues and cell lines examined. Northern analyses of the RNA indicated that there is an extensive variation in the levels of mRNA in ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(91)81354-b

    authors: Peri KG,MacKenzie RE

    更新日期:1991-12-02 00:00:00

  • Liposome-mediated peptide loading of MHC-DR molecules in vivo.

    abstract::Amino acid residues 3-15 of mycobacterial HSP60 define a dominant T-cell epitope for HLA-DR3+ve humans and Mamu-DR3+ve rhesus monkeys. Our results show that Mamu-DR3 molecules on PBMC can be efficiently loaded in vivo with the above-mentioned peptides when they are intravenously injected encapsulated in liposomes, but...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(97)00493-6

    authors: t Hart BA,Elferink DG,Drijfhout JW,Storm G,van Blooijs L,Bontrop RE,de Vries RR

    更新日期:1997-06-02 00:00:00

  • Cloning and functional characterisation of the mouse P2X7 receptor.

    abstract::We have isolated a 1785-bp complementary DNA (cDNA) encoding the murine P2X7 receptor subunit from NTW8 mouse microglial cells. The encoded protein has 80%, and 85% homology to the human and rat P2X7 subunits, respectively. Functional properties of the heterologously expressed murine P2X7 homomeric receptor broadly re...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(98)01332-5

    authors: Chessell IP,Simon J,Hibell AD,Michel AD,Barnard EA,Humphrey PP

    更新日期:1998-11-13 00:00:00

  • The X-ray structure of a divergent cyclophilin from the nematode parasite Brugia malayi.

    abstract::A structure of residues 1-177 of the cyclophilin domain of a large divergent cyclophilin from the filarial nematode parasite Brugia malayi has been crystallised and solved in two different crystal forms. The active site has a similar structure to that of human cyclophilin A. Two of the 13 residues important in forming...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(98)00264-6

    authors: Taylor P,Page AP,Kontopidis G,Husi H,Walkinshaw MD

    更新日期:1998-03-27 00:00:00

  • The mechanism of proton transport mediated by mitochondrial uncoupling proteins.

    abstract::The effort to understand the mechanism of uncoupling by UCP has devolved into two models - the fatty acid protonophore model and the proton buffering model. Evidence for each hypothesis is summarized and evaluated. We also evaluate the obligatory requirement for fatty acids in UCP1-mediated uncoupling and the question...

    journal_title:FEBS letters

    pub_type: 杂志文章,评审

    doi:10.1016/s0014-5793(98)01246-0

    authors: Garlid KD,Jabůrek M,Jezek P

    更新日期:1998-10-30 00:00:00

  • Structure and thermal stability of the extracellular fragment of human transferrin receptor at extracellular and endosomal pH.

    abstract::Fourier transform infrared spectroscopy has been used to study the solution structure and thermal stability of the extracellular fragment of human transferrin receptor (tfRt) at extracellular and endosomal pH. At extracellular pH tfRt is composed of 56% alpha-helix, 19% beta-sheet and 14% turns. Upon acidification to ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(94)00774-8

    authors: Hadden JM,Bloemendal M,Haris PI,van Stokkum IH,Chapman D,Srai SK

    更新日期:1994-08-22 00:00:00

  • Human testis cDNA for the regulatory subunit RII alpha of cAMP-dependent protein kinase encodes an alternate amino-terminal region.

    abstract::Phosphorylations catalyzed by cAMP-dependent protein kinase are essential for sperm motility, and type II cAMP-dependent protein kinase in mature sperm has been shown to be firmly bound to the flagellum via the regulatory subunit, RII. The present study documents high-levelled expression of a human, testis-specific RI...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(89)80253-4

    authors: Oyen O,Myklebust F,Scott JD,Hansson V,Jahnsen T

    更新日期:1989-03-27 00:00:00

  • Extended binding sites of cyclophilin as revealed by the interaction with HIV-1 Gag polyprotein derived oligopeptides.

    abstract::Oligopeptides derived from the gag polyprotein (Pr55gag) of human immunodeficiency virus type 1 (HIV-1) segment were used to evaluate the extension of the putative binding region for the complex of Pr55gag and the human cytosolic peptidyl prolyl cis/trans isomerase (PPIase) 18 kDa cyclophilin (Cyp18). Five N-terminall...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(96)00972-6

    authors: Schutkowski M,Drewello M,Wöllner S,Jakob M,Reimer U,Scherer G,Schierhorn A,Fischer G

    更新日期:1996-10-07 00:00:00

  • In vitro synthesis, tetramerization and single channel characterization of virus-encoded potassium channel Kcv.

    abstract::Chlorella virus-encoded membrane protein Kcv represents a new class of potassium channel. This 94-amino acids miniature K(+) channel consists of two trans-membrane alpha-helix domains intermediated by a pore domain that contains a highly conserved K(+) selectivity filter. Therefore, as an archetypal K(+) channel, the ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2007.02.005

    authors: Shim JW,Yang M,Gu LQ

    更新日期:2007-03-06 00:00:00

  • Multiple genes for G protein-coupled receptors and their expression in lingual epithelia.

    abstract::Using the polymerase chain reaction (PCR), we identified a gene family including more than 60 members which encoded similar G protein-coupled seven-transmembrane receptors. Sequence analyses of six representatives out of the 60 PCR clones showed that they had significant structural similarity to olfactory and optic re...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(93)81302-g

    authors: Abe K,Kusakabe Y,Tanemura K,Emori Y,Arai S

    更新日期:1993-02-01 00:00:00

  • The molecular peculiarities of catalase-peroxidases.

    abstract::In developing ideas of how protein structure modifies haem reactivity, the activity of Class I of the plant peroxidase superfamily (including cytochrome c peroxidase, ascorbate peroxidase and catalase-peroxidases (KatGs)) is an exciting field of research. Despite striking sequence homologies, there are dramatic differ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(01)02237-2

    authors: Zámocký M,Regelsberger G,Jakopitsch C,Obinger C

    更新日期:2001-03-16 00:00:00

  • Functional identification of AtFao3, a membrane bound long chain alcohol oxidase in Arabidopsis thaliana.

    abstract::The Arabidopsis thalina genome database was searched for homologues of the Candida cloacae fao1 gene which encodes a membrane bound, flavin-containing, hydrogen peroxide generating, long chain alcohol oxidase. This gene has not been isolated from plants or animals. Four putative candidates were found in the database b...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2004.07.086

    authors: Cheng Q,Liu HT,Bombelli P,Smith A,Slabas AR

    更新日期:2004-09-10 00:00:00

  • The PGM3 gene encodes the major phosphoribomutase in the yeast Saccharomyces cerevisiae.

    abstract::The phosphoglucomutases (PGM) Pgm1, Pgm2, and Pgm3 of the yeast Saccharomyces cerevisiae were tested for their ability to interconvert ribose-1-phosphate and ribose-5-phosphate. The purified proteins were studied in vitro with regard to their kinetic properties on glucose-1-phosphate and ribose-1-phosphate. All tested...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2012.09.042

    authors: Walther T,Baylac A,Alkim C,Vax A,Cordier H,François JM

    更新日期:2012-11-30 00:00:00