Establishment of the monomeric yellow-green fluorescent protein mNeonGreen for life cell imaging in mycelial fungi.

Abstract:

:The engineered monomeric version of the lancelet Branchiostoma lanceolatum fluorescent protein, mNeonGreen (mNG), has several positive characteristics, such as a very bright fluorescence, high photostability and fast maturation. These features make it a good candidate for the utilization as fluorescent tool for cell biology and biochemical applications in filamentous fungi. We report the generation of plasmids for the expression of the heterologous mNG gene under the control of an inducible and a constitutive promoter in the filamentous ascomycete Sordaria macrospora and display a stable expression of mNG in the cytoplasm. To demonstrate its usefulness for labeling of organelles, the peroxisomal targeting sequence serine-lysine-leucine (SKL) was fused to mNG. Expression of this tagged version led to protein import of mNG into peroxisomes and their bright fluorescence in life cell imaging.

journal_name

AMB Express

journal_title

AMB Express

authors

Werner A,Otte KL,Stahlhut G,Pöggeler S

doi

10.1186/s13568-020-01160-x

subject

Has Abstract

pub_date

2020-12-21 00:00:00

pages

222

issue

1

issn

2191-0855

pii

10.1186/s13568-020-01160-x

journal_volume

10

pub_type

杂志文章
  • Isolation and identification of a novel bacterium, Pseudomonas sp. ZyL-01, involved in the biodegradation of CL-20.

    abstract::Hexanitrohexaazaisowurtzitane (CL-20) is a compound with a polycyclic cage and an N-nitro group that has been shown to play an unfavorable role in environmental fate, biosafety, and physical health. The aim of this study was to isolate the microbial community and to identify a single microbial strain that can degrade ...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-020-01136-x

    authors: Liu Z,Dang K,Li C,Gao J,Wang H,Gao Y,Zhao B,Fan P,Qian A

    更新日期:2020-10-31 00:00:00

  • Genome features of Pseudomonas putida LS46, a novel polyhydroxyalkanoate producer and its comparison with other P. putida strains.

    abstract::A novel strain of Pseudomonas putida LS46 was isolated from wastewater on the basis of its ability to synthesize medium chain-length polyhydroxyalkanoates (mcl-PHAs). P.putida LS46 was differentiated from other P.putida strains on the basis of cpn60 (UT). The complete genome of P.putida LS46 was sequenced and annotate...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-014-0037-8

    authors: Sharma PK,Fu J,Zhang X,Fristensky B,Sparling R,Levin DB

    更新日期:2014-05-22 00:00:00

  • iTRAQ-based quantitative proteomic analysis of peripheral blood serum in piglets infected with Actinobacillus pleuropneumoniae.

    abstract::Porcine pleuropneumonia caused by Actinobacillus pleuropneumoniae (APP) is a swine respiratory disease with an important impact around the world either as a single infection or part of the porcine respiratory disease complex. The data of interaction between hosts and pathogens has becoming more crucial for exploration...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-020-01057-9

    authors: Zhu R,Bao C,Liu B,Xiao J,Sun C,Feng X,Langford PR,Li Y,Lei L

    更新日期:2020-07-06 00:00:00

  • Large-scale microcarrier culture of HEK293T cells and Vero cells in single-use bioreactors.

    abstract::Gene therapy and viral vaccine are becoming attractive therapeutic options for the treatment of different malignant diseases. Viral vector productions are often using static culture vessels and small volume stainless steel bioreactors (SSB). However, the yield of each vessel can be relatively low and multiple vessels ...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-019-0794-5

    authors: Yang J,Guertin P,Jia G,Lv Z,Yang H,Ju D

    更新日期:2019-05-24 00:00:00

  • A novel trehalosamine isolated from Bacillus amyloliquefaciens and its antibacterial activities.

    abstract::Bacillus amyloliquefaciens has been widely used as a probiotic in the field of biological control,and its antibacterial compounds plays an important role in the prevention and control of plant, livestock and poultry diseases. It has the advantages of green, safe and efficiency. This study aims to separate and purify a...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-019-0943-x

    authors: Wang Y,Zhao B,Liu Y,Mao L,Zhang X,Meng W,Liu K,Chu J

    更新日期:2020-01-14 00:00:00

  • Description of the interaction between Candida albicans and macrophages by mixed and quantitative proteome analysis without isolation.

    abstract::Candida albicans is an opportunistic pathogen that causes fatal diseases in immunocompromised hosts. Host resistance against C. albicans relies on ingestion of the pathogen by macrophages. Analysis of the escaping behavior of C. albicans from macrophages is required to understand the onset of systemic candidiasis. In ...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-015-0127-2

    authors: Kitahara N,Morisaka H,Aoki W,Takeda Y,Shibasaki S,Kuroda K,Ueda M

    更新日期:2015-12-01 00:00:00

  • Improvement of efficiency of brown coal biosolubilization by novel recombinant Fusarium oxysporum laccase.

    abstract::Clean coal technologies (e.g. coal biosolubilization) are of essential value, especially in Europe, where coal is the national wealth and other energy sources like crude oil are not available. Fusarium oxysporum LOCK 1134, the strain isolated from brown coal, efficiently biosolubilizes lignite. The obtained liquefied ...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-018-0669-1

    authors: Kwiatos N,Jędrzejczak-Krzepkowska M,Strzelecki B,Bielecki S

    更新日期:2018-08-22 00:00:00

  • Nigella A ameliorates inflammation and intestinal flora imbalance in DSS induced colitis mice.

    abstract::Nigella A, also named Sieboldianoside A, has been extracted from many kinds of Traditional Chinese Medicine (TCM), such as Nigella glandulifera, Stauntonia chinensis DC., and the leaves of Acanthopanax sieboldianus. Nigella A exhibited potential analgesic, anti-inflammatory, anti-tumor, and antioxidant activities. How...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-020-01114-3

    authors: Hu X,Xu N,Yang X,Hu X,Zheng Y,Zhang Q

    更新日期:2020-10-04 00:00:00

  • Overexpression of CsLEA11, a Y3SK2-type dehydrin gene from cucumber (Cucumis sativus), enhances tolerance to heat and cold in Escherichia coli.

    abstract::As the group II LEA (late embryogenesis abundant) proteins, dehydrins (DHNs) play an important role in plant growth and development, as well as in response to abiotic or biotic stress challenges. In this study, a DHN gene named CsLEA11 was identified and characterized from Cucumis sativus. Sequence analysis of CsLEA11...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-017-0483-1

    authors: Zhou Y,He P,Xu Y,Liu Q,Yang Y,Liu S

    更新日期:2017-09-29 00:00:00

  • Complete conversion of all typical glycosylated protopanaxatriol ginsenosides to aglycon protopanaxatriol by combined bacterial β-glycosidases.

    abstract::Aglycon protopanaxatriol (APPT) has valuable pharmacological effects such as anti-inflammatory and anti-stress activities. However, the complete conversion of all typical glycosylated protopanaxatriol ginsenosides to APPT has not been achieved to date. β-Glycosidase from the hyperthermophilic bacterium Dictyoglomus tu...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-018-0543-1

    authors: Yang EJ,Kim TH,Shin KC,Oh DK

    更新日期:2018-01-24 00:00:00

  • Biocatalytic activity of Monascus mycelia depending on physiology and high sensitivity to product concentration.

    abstract::Cell suspension culture using mycelia as whole cell biocatalyst for production of orange Monascus pigments has been carried out successfully in a nonionic surfactant micelle aqueous solution. Thus, selection of mycelia as whole cell biocatalyst and the corresponding enzymatic kinetics for production of orange Monascus...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-017-0391-4

    authors: Lu F,Huang Y,Zhang X,Wang Z

    更新日期:2017-12-01 00:00:00

  • Family 1 carbohydrate binding-modules enhance saccharification rates.

    abstract::Cellulose degrading enzymes usually have a two-domain structure consisting of a catalytic domain and a non-catalytic carbohydrate-binding module. Although it is well known the importance of those modules in cell wall degrading process, their function is not yet fully understood. Here, we analyze the cellulose-hydrolys...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-014-0036-9

    authors: Mello BL,Polikarpov I

    更新日期:2014-04-25 00:00:00

  • Chemical profiling, biostatic and biocidal dynamics of Origanum vulgare L. essential oil.

    abstract::Origanum vulgare L. (Lamiaceae) is a widespread flavoring culinary and medicinal herb. The present study aimed at investigating the antimicrobial activity of Origanum vulgare (OV) essential oil (EO) through illustrating its biostatic, biocidal and the dynamics of the biocidal activity against 11 different microorganis...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-019-0764-y

    authors: Fikry S,Khalil N,Salama O

    更新日期:2019-03-26 00:00:00

  • Methane-generating ammonia oxidizing nitrifiers within bio-filters in aquaculture tanks.

    abstract::The discovery of aerobic and anammox bacteria capable of generating methane in bio-filters in freshwater aquaculture systems is generating interest in studies to understand the activity, diversity, distribution and roles of these environmental bacteria. In this study, we used microbial enrichment of bio-filters to ass...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-018-0668-2

    authors: Kamira B,Shi LL,Fan LM,Zhang C,Zheng Y,Song C,Meng SL,Hu GD,Bing XW,Chen ZJ,Xu P

    更新日期:2018-08-28 00:00:00

  • Accessing inoculation methods of maize and wheat with Azospirillum brasilense.

    abstract::The utilization of inoculants containing Azospirillum is becoming more popular due to increasing reports of expressive gains in grain yields. However, incompatibility with pesticides used in seed treatments represents a main limitation for a successful inoculation. Therefore, in this study we searched for alternatives...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-015-0171-y

    authors: Fukami J,Nogueira MA,Araujo RS,Hungria M

    更新日期:2016-03-01 00:00:00

  • Utilization of acid pre-treated coconut dregs as a substrate for production of detergent compatible lipase by Bacillus stratosphericus.

    abstract::In recent years, many efforts have been directed to explore the methods to reduce the production costs of industrial lipase by improving the yield and the use of low-cost agricultural wastes. Coconut dregs, which is a lignocellulosic by-product from coconut oil and milk processing plants, is rich in cellulose (36%) an...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-017-0433-y

    authors: Mohd Zin NB,Mohamad Yusof B,Oslan SN,Wasoh H,Tan JS,Ariff AB,Halim M

    更新日期:2017-12-01 00:00:00

  • Phasin PhaP1 is involved in polyhydroxybutyrate granules morphology and in controlling early biopolymer accumulation in Azospirillum brasilense Sp7.

    abstract::Phasins are amphiphilic proteins involved in the regulation of the number and size of polyhydroxybutyrate (PHB) granules. The plant growth promoting bacterium Azospirillum brasilense Sp7 accumulates high quantities of bioplastic PHB as carbon and energy source. By analyzing the genome, we identified six genes that cod...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-019-0876-4

    authors: Martínez-Martínez MLA,González-Pedrajo B,Dreyfus G,Soto-Urzúa L,Martínez-Morales LJ

    更新日期:2019-09-25 00:00:00

  • Characterization of FsXEG12A from the cellulose-degrading ectosymbiotic fungus Fusarium spp. strain EI cultured by the ambrosia beetle.

    abstract::Despite the threat of Fusarium dieback posed due to ambrosia fungi cultured by ambrosia beetles such as Euwallacea spp., the wood-degradation mechanisms utilized by ambrosia fungi are not fully understood. In this study, we analyzed the 16S rRNA and 18S rRNA genes of the microbial community from the Ficus tree tunnel ...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-020-01030-6

    authors: Sakai K,Yamaguchi A,Tsutsumi S,Kawai Y,Tsuzuki S,Suzuki H,Jindou S,Suzuki Y,Kajimura H,Kato M,Shimizu M

    更新日期:2020-05-24 00:00:00

  • Purification and characterization of hydroquinone dioxygenase from Sphingomonas sp. strain TTNP3.

    abstract:: Hydroquinone-1,2-dioxygenase, an enzyme involved in the degradation of alkylphenols in Sphingomonas sp. strain TTNP3 was purified to apparent homogeneity. The extradiol dioxygenase catalyzed the ring fission of hydroquinone to 4-hydroxymuconic semialdehyde and the degradation of chlorinated and several alkylated hydr...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/2191-0855-1-8

    authors: Kolvenbach BA,Lenz M,Benndorf D,Rapp E,Fousek J,Vlcek C,Schäffer A,Gabriel FL,Kohler HP,Corvini PF

    更新日期:2011-05-27 00:00:00

  • Response of microbial community structure and metabolic profile to shifts of inlet VOCs in a gas-phase biofilter.

    abstract::The effects of inlet VOCs (Volatile Organic Compounds) shifts on microbial community structure in a biofiltration system were investigated. A lab-scale biofilter was set up to treat eight VOCs sequentially. Short declines in removal efficiency appeared after VOCs shifts and then later recovered. The number of OTUs in ...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-018-0687-z

    authors: Lu L,Wang G,Yeung M,Xi J,Hu HY

    更新日期:2018-10-03 00:00:00

  • Metagenomic analysis reveals potential interactions in an artificial coculture.

    abstract::Disentangling the interactions between cyanobacteria and associated bacterial community is important for understanding the mechanisms that mediate the formation of cyanobacterial blooms in freshwater ecosystems. Despite the fact that a metagenomic approach enables researchers to profile the structure of microbial comm...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-017-0490-2

    authors: Ren M,Zhang G,Ye Z,Qiao Z,Xie M,Lin Y,Li T,Zhao J

    更新日期:2017-11-02 00:00:00

  • Changes in feeding habits promoted the differentiation of the composition and function of gut microbiotas between domestic dogs (Canis lupus familiaris) and gray wolves (Canis lupus).

    abstract::Wolves (Canis lupus) and their domesticated and close relatives, dogs (Canis lupus familiaris), have great differences in their diets and living environments. To the best of our knowledge, the fundamental question of how the abundance and function of the gut microbiota of domestic dogs evolved to adapt to the changes ...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-018-0652-x

    authors: Lyu T,Liu G,Zhang H,Wang L,Zhou S,Dou H,Pang B,Sha W,Zhang H

    更新日期:2018-08-02 00:00:00

  • Petroleum degradation by Pseudomonas sp. ZS1 is impeded in the presence of antagonist Alcaligenes sp. CT10.

    abstract::Enhanced bioremediation is a favorable approach for petroleum pollutant cleanup, which depends on the growth of oil-eating microorganisms. In this study, we show that, by using the modified T-RFLP (mT-RFLP) methodology, one of the four major microbial populations derived from oil sludge has failed to propagate in MS m...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-018-0620-5

    authors: Liang J,Cheng T,Huang Y,Liu J

    更新日期:2018-05-28 00:00:00

  • Bioconversion of curcumin into calebin-A by the endophytic fungus Ovatospora brasiliensis EPE-10 MTCC 25236 associated with Curcuma caesia.

    abstract::Calebin-A is a curcuminoid compound reported to be present in Curcuma longa rhizome. The current study was aimed to isolate and characterize calebin-A from Curcuma caesia rhizome and its production through biotransformation approach using endophytic fungus. C. caesia rhizomes of different ages were subjected to analys...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-019-0802-9

    authors: Majeed A,Majeed M,Thajuddin N,Arumugam S,Ali F,Beede K,Adams SJ,Gnanamani M

    更新日期:2019-05-29 00:00:00

  • Autolysis of Pichia pastoris induced by cold.

    abstract::The production of recombinant biopharmaceutical proteins is a multi-billion dollar market. Protein recovery represents a major part of the production costs. Pichia pastoris is one of the microbial systems most used for the production of heterologous proteins. The use of a cold-induced promoter to express lytic enzymes...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-017-0397-y

    authors: Bartolo-Aguilar Y,Dendooven L,Chávez-Cabrera C,Flores-Cotera LB,Hidalgo-Lara ME,Villa-Tanaca L,Marsch R

    更新日期:2017-12-01 00:00:00

  • Methanogenic biodegradation of C9 to C12n-alkanes initiated by Smithella via fumarate addition mechanism.

    abstract::In the present study, a methanogenic alkane-degrading (a mixture of C9 to C12n-alkanes) culture enriched from production water of a low-temperature oil reservoir was established and assessed. Significant methane production was detected in the alkane-amended enrichment cultures compared with alkane-free controls over a...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-020-0956-5

    authors: Ji JH,Zhou L,Mbadinga SM,Irfan M,Liu YF,Pan P,Qi ZZ,Chen J,Liu JF,Yang SZ,Gu JD,Mu BZ

    更新日期:2020-02-01 00:00:00

  • Characterization of Aspergillus aculeatus β-glucosidase 1 accelerating cellulose hydrolysis with Trichoderma cellulase system.

    abstract::Aspergillus aculeatus β-glucosidase 1 (AaBGL1), which promotes cellulose hydrolysis by Trichoderma cellulase system, was characterized and compared some properties to a commercially supplied orthologue in A. niger (AnBGL) to elucidate advantages of recombinant AaBGL1 (rAaBGL1) for synergistic effect on Trichoderma enz...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-014-0090-3

    authors: Baba Y,Sumitani JI,Tani S,Kawaguchi T

    更新日期:2015-01-24 00:00:00

  • Optimisation of enzymatic hydrolysis of cassava peel to produce fermentable sugars.

    abstract::Enzymatic hydrolysis of cassava peels was evaluated using cellulase and beta-glucanase enzymes and their mixtures at three different enzyme loadings with time. The pH of the medium used for hydrolysis was 5 and the temperature was 50 °C. The efficiency of the hydrolysis using beta-glucanase was better than cellulase a...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-015-0146-z

    authors: Bayitse R,Hou X,Bjerre AB,Saalia FK

    更新日期:2015-12-01 00:00:00

  • Growth kinetics, fatty acid composition and metabolic activity changes of Crypthecodinium cohnii under different nitrogen source and concentration.

    abstract::The effect of varying concentrations of the nitrogen source on the growth kinetics, lipid accumulation, lipid and DHA productivity, and fatty acid composition of C. cohnii was elucidated. Growth of C. cohnii was in three distinct growth stages: cell growth, lipid accumulation and a final lipid turnover stage. Most of ...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-017-0384-3

    authors: Safdar W,Shamoon M,Zan X,Haider J,Sharif HR,Shoaib M,Song Y

    更新日期:2017-12-01 00:00:00

  • Stable and transient transformation, and a promoter assay in the selective lignin-degrading fungus, Ceriporiopsis subvermispora.

    abstract::A genetic transformation system was developed for the selective white rot basidiomycete Ceriporiopsis subvermispora using a modified protocol with polyethylene glycol and CaCl2 treatment of the protoplasts and plasmids harboring recombinant hygromycin phosphotransferase (hph) driven by a homologous promoter. During re...

    journal_title:AMB Express

    pub_type: 杂志文章

    doi:10.1186/s13568-019-0818-1

    authors: Honda Y,Tanigawa E,Tsukihara T,Nguyen DX,Kawabe H,Sakatoku N,Watari J,Sato H,Yano S,Tachiki T,Irie T,Watanabe T,Watanabe T

    更新日期:2019-06-24 00:00:00