The BenBioDen database, a global database for meio-, macro- and megabenthic biomass and densities.

abstract：:This paper describes the methodology of an ongoing project of constructing an East Asian climate database REACHES based on Chinese historical documents. The record source is Compendium of Meteorological Records of China in the Last 3000 Years which collects meteorology and climate related records from mainly official ...

journal_title：Scientific data

authors： Wang PK,Lin KE,Liao YC,Liao HM,Lin YS,Hsu CT,Hsu SM,Wan CW,Lee SY,Fan IC,Tan PH,Ting TT

更新日期：2018-12-18 00:00:00

abstract：:The nuclear receptor estrogen receptor 2 (ESR2, ERβ) modulates cancer cell proliferation and tumor growth, exerting an oncosuppressive role in breast cancer (BC). Interaction proteomics by tandem affinity purification coupled to mass spectrometry was previously applied in BC cells to identify proteins acting in concer...

journal_title：Scientific data

authors： Giurato G,Nassa G,Salvati A,Alexandrova E,Rizzo F,Nyman TA,Weisz A,Tarallo R

更新日期：2018-03-06 00:00:00

abstract：:Functional trait databases are emerging as crucial tools for a wide range of ecological studies across the world. Here, we provide a database of functional traits for vascular plant species of the Mediterranean Basin. The database includes 25,764 individual records of 44 traits from 2,457 plant taxa distributed in 119...

journal_title：Scientific data

authors： Tavşanoğlu Ç,Pausas JG

更新日期：2018-07-10 00:00:00

abstract：:Orchid epiphytes, a group containing at least 18,000 species, thrive in habitats that often undergo periodic drought stress. However, few global gene expression profiling datasets have been published for studies addressing the drought-resistant mechanism of this special population. In this study, an experiment involvi...

journal_title：Scientific data

authors： Wan X,Zou LH,Zheng BQ,Tian YQ,Wang Y

更新日期：2018-10-30 00:00:00

abstract：:This article presents a practical roadmap for scholarly data repositories to implement data citation in accordance with the Joint Declaration of Data Citation Principles, a synopsis and harmonization of the recommendations of major science policy bodies. The roadmap was developed by the Repositories Expert Group, as p...

journal_title：Scientific data

authors： Fenner M,Crosas M,Grethe JS,Kennedy D,Hermjakob H,Rocca-Serra P,Durand G,Berjon R,Karcher S,Martone M,Clark T

更新日期：2019-04-10 00:00:00

abstract：:Surveys for more than 9,500 households were conducted in the growing seasons 2002/2003 or 2003/2004 in eleven African countries: Burkina Faso, Cameroon, Ghana, Niger and Senegal in western Africa; Egypt in northern Africa; Ethiopia and Kenya in eastern Africa; South Africa, Zambia and Zimbabwe in southern Africa. Hous...

journal_title：Scientific data

authors： Waha K,Zipf B,Kurukulasuriya P,Hassan RM

更新日期：2016-05-24 00:00:00

abstract：:In the wake of the Fukushima nuclear disaster, Japan largely moved away from nuclear power generation and turned back towards an energy sector dominated by fossil fuels. As a result, the pace towards reaching emission reduction targets has largely slowed down. This situation indicates that higher emissions will contin...

journal_title：Scientific data

authors： Long Y,Yoshida Y,Zhang H,Zheng H,Shan Y,Guan D

更新日期：2020-07-13 00:00:00

abstract：:We describe a screen for cellular response to drugs that makes use of haploid embryonic stem cells. We generated ten libraries of mutants with piggyBac gene trap transposon integrations, totalling approximately 100,000 mutant clones. Random barcode sequences were inserted into the transposon vector to allow the number...

journal_title：Scientific data

authors： Pettitt SJ,Krastev DB,Pemberton HN,Fontebasso Y,Frankum J,Rehman FL,Brough R,Song F,Bajrami I,Rafiq R,Wallberg F,Kozarewa I,Fenwick K,Armisen-Garrido J,Swain A,Gulati A,Campbell J,Ashworth A,Lord CJ

更新日期：2017-03-01 00:00:00

abstract：:Magnetic resonance angiography (MRA) can capture the variation of cerebral arteries with high spatial resolution. These measurements include valuable information about the morphology, geometry, and density of brain arteries, which may be useful to identify risk factors for cerebrovascular and neurological diseases at ...

journal_title：Scientific data

authors： Mouches P,Forkert ND

更新日期：2019-04-11 00:00:00

abstract：:It is estimated that approximately 4-5% of national energy consumption can be saved through corrections to existing commercial building controls infrastructure and resulting improvements to efficiency. Correspondingly, automated fault detection and diagnostics (FDD) algorithms are designed to identify the presence of ...

journal_title：Scientific data

authors： Granderson J,Lin G,Harding A,Im P,Chen Y

更新日期：2020-02-24 00:00:00

abstract：:Both poly(A) enrichment and ribosomal RNA depletion are commonly used for RNA sequencing. Either has its advantages and disadvantages that may lead to biases in the downstream analyses. To better access these effects, we carried out both ribosomal RNA-depleted and poly(A)-selected RNA-seq for CD4+ T naive cells isolat...

journal_title：Scientific data

authors： Chen L,Yang R,Kwan T,Tang C,Watt S,Zhang Y,Bourque G,Ge B,Downes K,Frontini M,Ouwehand WH,Lin JW,Soranzo N,Pastinen T,Chen L

更新日期：2020-11-09 00:00:00

abstract：:Understanding of sequence diversity is the cornerstone of analysis of genetic disorders, population genetics, and evolutionary biology. Here, we present an update of our sequencing set to 15,220 Icelanders who we sequenced to an average genome-wide coverage of 34X. We identified 39,020,168 autosomal variants passing G...

journal_title：Scientific data

authors： Jónsson H,Sulem P,Kehr B,Kristmundsdottir S,Zink F,Hjartarson E,Hardarson MT,Hjorleifsson KE,Eggertsson HP,Gudjonsson SA,Ward LD,Arnadottir GA,Helgason EA,Helgason H,Gylfason A,Jonasdottir A,Jonasdottir A,Rafnar T,Bes

更新日期：2017-09-21 00:00:00

abstract：:The Serengeti ecosystem spans an extensive network of protected areas in Tanzania, eastern Africa, and a UNESCO Wold Heritage Site. It is home to some of the largest animal migrations on the planet. Here, we describe a dataset consisting of the sample counts of three age classes (infant, juvenile and adult) of 13 ungu...

journal_title：Scientific data

authors： Rogy P,Sinclair ARE

更新日期：2020-10-21 00:00:00

abstract：:We present an ultra-high resolution MRI dataset of an ex vivo human brain specimen. The brain specimen was donated by a 58-year-old woman who had no history of neurological disease and died of non-neurological causes. After fixation in 10% formalin, the specimen was imaged on a 7 Tesla MRI scanner at 100 µm isotropic ...

journal_title：Scientific data

authors： Edlow BL,Mareyam A,Horn A,Polimeni JR,Witzel T,Tisdall MD,Augustinack JC,Stockmann JP,Diamond BR,Stevens A,Tirrell LS,Folkerth RD,Wald LL,Fischl B,van der Kouwe A

更新日期：2019-10-30 00:00:00

abstract：:The human HCC1806 cell line is frequently used as a preclinical model for triple negative breast cancer (TNBC). Given that dysregulated epigenetic mechanisms are involved in cancer pathogenesis, emerging therapeutic strategies target chromatin regulators, such as histone deacetylases. A comprehensive understanding of ...

journal_title：Scientific data

authors： Perreault AA,Sprunger DM,Venters BJ

更新日期：2019-03-05 00:00:00

abstract：:There are recent studies which aimed to detect the inheritance on the etiology of dental caries exploring oral composition. We present data on the oral microbiota and its relation with dental caries and other factors in monozygotic (MZ) and dizygotic (DZ) twin children. Following clinical investigation, DNA samples we...

journal_title：Scientific data

authors： Kasimoglu Y,Koruyucu M,Birant S,Karacan I,Topcuoglu N,Tuna EB,Gencay K,Seymen F

更新日期：2020-10-13 00:00:00

abstract：:Gait analysis has traditionally relied on laborious and lab-based methods. Data from wearable sensors, such as Inertial Measurement Units (IMU), can be analyzed with machine learning to perform gait analysis in real-world environments. This database provides data from thirty participants (fifteen males and fifteen fem...

journal_title：Scientific data

authors： Luo Y,Coppola SM,Dixon PC,Li S,Dennerlein JT,Hu B

更新日期：2020-07-08 00:00:00

abstract：:Polyadenylation plays an important role in gene regulation, thus affecting a wide variety of biological processes. In the rice blast fungus Magnaporthe oryzae the cleavage factor I protein Rpb35 is required for pre-mRNA polyadenylation and fungal virulence. Here we present the bioinformatic approach and output data re...

journal_title：Scientific data

authors： Marconi M,Sesma A,Rodríguez-Romero JL,González MLR,Wilkinson MD

更新日期：2018-11-27 00:00:00

abstract：:Asymptomatic ebolavirus infection could greatly influence transmission dynamics, but there is little consensus on how frequently it occurs or even if it exists. This paper summarises the available evidence on seroprevalence of Ebola, Sudan and Bundibugyo virus IgG in people without known ebolavirus disease. Through sy...

journal_title：Scientific data

authors： Bower H,Glynn JR

更新日期：2017-01-31 00:00:00

abstract：:There is still limited information on the diversity of viruses co-circulating in humans and animals. Here, we report data obtained from a large field collection of enteric samples taken from humans, pigs, rodents and other mammal hosts in Vietnam between 2012 and 2016. Each of 2100 stool or rectal swab samples was sub...

journal_title：Scientific data

authors： Woolhouse M,Ashworth J,Bogaardt C,Tue NT,Baker S,Thwaites G,Phuc TM

更新日期：2019-10-15 00:00:00

abstract：:Patient-specific craniofacial implants are used to repair skull bone defects after trauma or surgery. Currently, cranial implants are designed and produced by third-party suppliers, which is usually time-consuming and expensive. Recent advances in additive manufacturing made the in-hospital or in-operation-room fabric...

journal_title：Scientific data

authors： Li J,Gsaxner C,Pepe A,Morais A,Alves V,von Campe G,Wallner J,Egger J

更新日期：2021-01-29 00:00:00

abstract：:We introduce the Precipitation Probability DISTribution (PPDIST) dataset, a collection of global high-resolution (0.1°) observation-based climatologies (1979-2018) of the occurrence and peak intensity of precipitation (P) at daily and 3-hourly time-scales. The climatologies were produced using neural networks trained ...

journal_title：Scientific data

authors： Beck HE,Westra S,Tan J,Pappenberger F,Huffman GJ,McVicar TR,Gründemann GJ,Vergopolan N,Fowler HJ,Lewis E,Verbist K,Wood EF

更新日期：2020-09-11 00:00:00

abstract：:Gammarids are amphipods found worldwide distributed in fresh and marine waters. They play an important role in aquatic ecosystems and are well established sentinel species in ecotoxicology. In this study, we sequenced the transcriptomes of a male individual and a female individual for seven different taxonomic groups ...

journal_title：Scientific data

authors： Cogne Y,Degli-Esposti D,Pible O,Gouveia D,François A,Bouchez O,Eché C,Ford A,Geffard O,Armengaud J,Chaumot A,Almunia C

更新日期：2019-09-27 00:00:00

abstract：:The big-headed turtle, Platysternon megacephalum, as the sole member of the monotypic family Platysternidae, has a number of distinct characteristics including an extra-large head, long tail, flat carapace, and a preference for low water temperature environments. We performed whole genome sequencing, assembly, and gen...

journal_title：Scientific data

authors： Cao D,Wang M,Ge Y,Gong S

更新日期：2019-05-16 00:00:00

abstract：:Serial electron microscopy techniques have proven to be a powerful tool in biology. Unfortunately, the data sets they generate lack robust and accurate automated segmentation algorithms. In this data descriptor publication, we introduce a serial focused ion beam scanning electron microscopy (FIB-SEM) dataset consistin...

journal_title：Scientific data

authors： Ivanchenko MV,Cicconet M,Jandal HA,Wu X,Corey DP,Indzhykulian AA

更新日期：2020-06-17 00:00:00

abstract：:Populations in resource dependent economies gain well-being from the natural environment, in highly spatially and temporally variable patterns. To collect information on this, we designed and implemented a 1586-household quantitative survey in the southwest coastal zone of Bangladesh. Data were collected on material, ...

journal_title：Scientific data

authors： Adams H,Adger WN,Ahmad S,Ahmed A,Begum D,Lázár AN,Matthews Z,Rahman MM,Streatfield PK

更新日期：2016-11-08 00:00:00

abstract：:[This corrects the article DOI: 10.1038/sdata.2014.11.]. ...

journal_title：Scientific data

authors： Baud A,Guryev V,Hummel O,Johannesson M,Rat Genome Sequencing and Mapping Consortium.,Flint J

更新日期：2014-07-08 00:00:00

abstract：:In prokaryotes, protein phosphorylation plays a critical role in regulating a broad spectrum of biological processes and occurs mainly on various amino acids, including serine (S), threonine (T), tyrosine (Y), arginine (R), aspartic acid (D), histidine (H) and cysteine (C) residues of protein substrates. Through liter...

journal_title：Scientific data

authors： Shi Y,Zhang Y,Lin S,Wang C,Zhou J,Peng D,Xue Y

更新日期：2020-05-29 00:00:00

abstract：:While there is a high interest in drug combinations in cancer therapy, openly accessible datasets for drug combination responses are sparse. Here we present a dataset comprising 171 pairwise combinations of 19 individual drugs targeting signal transduction mechanisms across eight cancer cell lines, where the effect of...

journal_title：Scientific data

authors： Flobak Å,Niederdorfer B,Nakstad VT,Thommesen L,Klinkenberg G,Lægreid A

更新日期：2019-10-29 00:00:00

abstract：:We performed whole-genome sequencing for eight inbred rat strains commonly used in genetic mapping studies. They are the founders of the NIH heterogeneous stock (HS) outbred colony. We provide their sequences and variant calls to the rat genomics community. When analyzing the variant calls we identified regions with u...

journal_title：Scientific data

authors： Ramdas S,Ozel AB,Treutelaar MK,Holl K,Mandel M,Woods LCS,Li JZ

更新日期：2019-04-23 00:00:00