Erratum: Genomes and phenomes of a population of outbred rats and its progenitors.

abstract：:Serial electron microscopy techniques have proven to be a powerful tool in biology. Unfortunately, the data sets they generate lack robust and accurate automated segmentation algorithms. In this data descriptor publication, we introduce a serial focused ion beam scanning electron microscopy (FIB-SEM) dataset consistin...

journal_title：Scientific data

authors： Ivanchenko MV,Cicconet M,Jandal HA,Wu X,Corey DP,Indzhykulian AA

更新日期：2020-06-17 00:00:00

abstract：:The silkmoth chorion was studied extensively by F.C. Kafatos' group for almost 40 years. However, the complete structure of the chorion locus was not obtained in the genome sequence of Bombyx mori published in 2008 due to repetitive sequences, resulting in gaps and an incomplete view of the locus. To obtain the comple...

journal_title：Scientific data

authors： Chen Z,Nohata J,Guo H,Li S,Liu J,Guo Y,Yamamoto K,Kadono-Okuda K,Liu C,Arunkumar KP,Nagaraju J,Zhang Y,Liu S,Labropoulou V,Swevers L,Tsitoura P,Iatrou K,Gopinathan KP,Goldsmith MR,Xia Q,Mita K

更新日期：2015-11-10 00:00:00

abstract：:The London Planetree (Platanus acerifolia) are present throughout the world. The tree is considered a greening plant and is commonly planted in streets, parks, and courtyards. The Sycamore lace bug (Corythucha ciliata) is a serious pest of this tree. To determine the molecular mechanism behind the interaction between ...

journal_title：Scientific data

authors： Li F,Wu C,Gao M,Jiao M,Qu C,Gonzalez-Uriarte A,Luo C

更新日期：2019-07-22 00:00:00

abstract：:Accurately characterizing land surface changes with Earth Observation requires geo-located ground truth. In the European Union (EU), a tri-annual surveyed sample of land cover and land use has been collected since 2006 under the Land Use/Cover Area frame Survey (LUCAS). A total of 1351293 observations at 651780 unique...

journal_title：Scientific data

authors： d'Andrimont R,Yordanov M,Martinez-Sanchez L,Eiselt B,Palmieri A,Dominici P,Gallego J,Reuter HI,Joebges C,Lemoine G,van der Velde M

更新日期：2020-10-16 00:00:00

abstract：:As a World Health Organization Research and Development Blueprint priority pathogen, there is a need to better understand the geographic distribution of Middle East Respiratory Syndrome Coronavirus (MERS-CoV) and its potential to infect mammals and humans. This database documents cases of MERS-CoV globally, with speci...

journal_title：Scientific data

authors： Ramshaw RE,Letourneau ID,Hong AY,Hon J,Morgan JD,Osborne JCP,Shirude S,Van Kerkhove MD,Hay SI,Pigott DM

更新日期：2019-12-13 00:00:00

abstract：:Estuaries are crucial ecosystems where human activities deeply affect numerous ecological functions. Here we present a survey dataset based on the monitoring of fish nursery grounds of the Seine estuary and eastern bay of Seine collected once a year using a beam trawl during three distinct periods (1995-2002, 2008-201...

journal_title：Scientific data

authors： Cariou T,Dubroca L,Vogel C

更新日期：2020-07-13 00:00:00

abstract：:Cross sectional imaging is essential for the patient-specific planning and delivery of radiotherapy, a primary determinant of head and neck cancer outcomes. Due to challenges ensuring data quality and patient de-identification, publicly available datasets including diagnostic and radiation treatment planning imaging a...

journal_title：Scientific data

authors： Grossberg AJ,Mohamed ASR,Elhalawani H,Bennett WC,Smith KE,Nolan TS,Williams B,Chamchod S,Heukelom J,Kantor ME,Browne T,Hutcheson KA,Gunn GB,Garden AS,Morrison WH,Frank SJ,Rosenthal DI,Freymann JB,Fuller CD

更新日期：2018-09-04 00:00:00

abstract：:Size-resolved aerosol samples were collected in Metro Manila between July 2018 and October 2019. Two Micro-Orifice Uniform Deposit Impactors (MOUDI) were deployed at Manila Observatory in Quezon City, Metro Manila with samples collected on a weekly basis for water-soluble speciation and mass quantification. Additional...

journal_title：Scientific data

authors： Stahl C,Cruz MT,Bañaga PA,Betito G,Braun RA,Aghdam MA,Cambaliza MO,Lorenzo GR,MacDonald AB,Pabroa PC,Yee JR,Simpas JB,Sorooshian A

更新日期：2020-04-29 00:00:00

abstract：:We present the Tesco Grocery 1.0 dataset: a record of 420 M food items purchased by 1.6 M fidelity card owners who shopped at the 411 Tesco stores in Greater London over the course of the entire year of 2015, aggregated at the level of census areas to preserve anonymity. For each area, we report the number of transact...

journal_title：Scientific data

authors： Aiello LM,Quercia D,Schifanella R,Del Prete L

更新日期：2020-02-18 00:00:00

abstract：:Benthic fauna refers to all fauna that live in or on the seafloor, which researchers typically divide into size classes meiobenthos (32/64 µm-0.5/1 mm), macrobenthos (250 µm-1 cm), and megabenthos (>1 cm). Benthic fauna play important roles in bioturbation activity, mineralization of organic matter, and in marine food...

journal_title：Scientific data

authors： Stratmann T,van Oevelen D,Martínez Arbizu P,Wei CL,Liao JX,Cusson M,Scrosati RA,Archambault P,Snelgrove PVR,Ramey-Balci PA,Burd BJ,Kenchington E,Gilkinson K,Belley R,Soetaert K

更新日期：2020-06-29 00:00:00

abstract：:As basic data, the river networks and water resources zones (WRZ) are critical for planning, utilization, development, conservation and management of water resources. Currently, the river network and WRZ of world are most obtained based on digital elevation model data automatically, which are not accuracy enough, espe...

journal_title：Scientific data

authors： Yan D,Wang K,Qin T,Weng B,Wang H,Bi W,Li X,Li M,Lv Z,Liu F,He S,Ma J,Shen Z,Wang J,Bai H,Man Z,Sun C,Liu M,Shi X,Jing L,Sun R,Cao S,Hao C,Wang L,Pei M,Dorjsuren B,Gedefaw M,Girma A,Abiyu A

更新日期：2019-10-22 00:00:00

abstract：:Patient-specific craniofacial implants are used to repair skull bone defects after trauma or surgery. Currently, cranial implants are designed and produced by third-party suppliers, which is usually time-consuming and expensive. Recent advances in additive manufacturing made the in-hospital or in-operation-room fabric...

journal_title：Scientific data

authors： Li J,Gsaxner C,Pepe A,Morais A,Alves V,von Campe G,Wallner J,Egger J

更新日期：2021-01-29 00:00:00

abstract：:An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

journal_title：Scientific data

authors： Seyednasrollah B,Young AM,Hufkens K,Milliman T,Friedl MA,Frolking S,Richardson AD

更新日期：2019-11-01 00:00:00

abstract：:Although a key driver of Earth's climate system, global land-atmosphere energy fluxes are poorly constrained. Here we use machine learning to merge energy flux measurements from FLUXNET eddy covariance towers with remote sensing and meteorological data to estimate global gridded net radiation, latent and sensible heat...

journal_title：Scientific data

authors： Jung M,Koirala S,Weber U,Ichii K,Gans F,Camps-Valls G,Papale D,Schwalm C,Tramontana G,Reichstein M

更新日期：2019-05-27 00:00:00

abstract：:Neuroblastoma cell lines are an important and cost-effective model used to study oncogenic drivers of the disease. While many of these cell lines have been previously characterized with SNP, methylation, and/or mRNA expression microarrays, there has not been an effort to comprehensively sequence these cell lines. Here...

journal_title：Scientific data

authors： Harenza JL,Diamond MA,Adams RN,Song MM,Davidson HL,Hart LS,Dent MH,Fortina P,Reynolds CP,Maris JM

更新日期：2017-03-28 00:00:00

abstract：:Viruses are highly discriminating in their interactions with host cells and are thought to play a major role in maintaining diversity of environmental microbes. However, large-scale ecological and genomic studies of co-occurring virus-host pairs, required to characterize the mechanistic and genomic foundations of viru...

journal_title：Scientific data

authors： Kauffman KM,Brown JM,Sharma RS,VanInsberghe D,Elsherbini J,Polz M,Kelly L

更新日期：2018-07-03 00:00:00

abstract：:Hydrologic soil groups (HSGs) are a fundamental component of the USDA curve-number (CN) method for estimation of rainfall runoff; yet these data are not readily available in a format or spatial-resolution suitable for regional- and global-scale modeling applications. We developed a globally consistent, gridded dataset...

journal_title：Scientific data

authors： Ross CW,Prihodko L,Anchang J,Kumar S,Ji W,Hanan NP

更新日期：2018-05-15 00:00:00

abstract：:In 2010, an estimated 860 million people were living in slums worldwide, with around 60 million added to the slum population between 2000 and 2010. In 2011, 200 million people in urban Indian households were considered to live in slums. In order to address and create slum development programmes and poverty alleviation...

journal_title：Scientific data

authors： Roy D,Palavalli B,Menon N,King R,Pfeffer K,Lees M,Sloot PMA

更新日期：2018-01-09 00:00:00

abstract：:In this work, we compare the resolution of V2-V3 and V3-V4 16S rRNA regions for the purposes of estimating microbial community diversity using paired-end Illumina MiSeq reads, and show that the fragment, including V2 and V3 regions, has higher resolution for lower-rank taxa (genera and species). It allows for a more p...

journal_title：Scientific data

authors： Bukin YS,Galachyants YP,Morozov IV,Bukin SV,Zakharenko AS,Zemskaya TI

更新日期：2019-02-05 00:00:00

abstract：:In this paper we analyse the spatial footprint and temporal clustering of extreme sea level and skew surge events around the UK coast over the last 100 years (1915-2014). The vast majority of the extreme sea level events are generated by moderate, rather than extreme skew surges, combined with spring astronomical high...

journal_title：Scientific data

authors： Haigh ID,Wadey MP,Wahl T,Ozsoy O,Nicholls RJ,Brown JM,Horsburgh K,Gouldby B

更新日期：2016-12-06 00:00:00

abstract：:In order to map global disease risk, a geographic database of human Crimean-Congo haemorrhagic fever virus (CCHFV) occurrence was produced by surveying peer-reviewed literature and case reports, as well as informal online sources. Here we present this database, comprising occurrence data linked to geographic point or ...

journal_title：Scientific data

authors： Messina JP,Pigott DM,Duda KA,Brownstein JS,Myers MF,George DB,Hay SI

更新日期：2015-04-14 00:00:00

abstract：:In angiogenesis with concurrent inflammation, many pathways are activated, some linked to VEGF and others largely VEGF-independent. Pathways involving inflammatory mediators, chemokines, and micro-RNAs may play important roles in maintaining a pro-angiogenic environment or mediating angiogenic regression. Here, we des...

journal_title：Scientific data

authors： Mukwaya A,Lindvall JM,Xeroudaki M,Peebo B,Ali Z,Lennikov A,Jensen LD,Lagali N

更新日期：2016-11-22 00:00:00

abstract：:Preterm birth, or the delivery of an infant prior to 37 weeks of gestation, is a significant cause of infant morbidity and mortality. In the last decade, the advent and continued development of molecular profiling technologies has enabled researchers to generate vast amount of 'omics' data, which together with integra...

journal_title：Scientific data

authors： Sirota M,Thomas CG,Liu R,Zuhl M,Banerjee P,Wong RJ,Quaintance CC,Leite R,Chubiz J,Anderson R,Chappell J,Kim M,Grobman W,Zhang G,Rokas A,England SK,Parry S,Shaw GM,Simpson JL,Thomson E,Butte AJ,March of Dimes Pre

更新日期：2018-11-06 00:00:00

abstract：:Direct-infusion mass spectrometry (DIMS) metabolomics is an important approach for characterising molecular responses of organisms to disease, drugs and the environment. Increasingly large-scale metabolomics studies are being conducted, necessitating improvements in both bioanalytical and computational workflows to ma...

journal_title：Scientific data

authors： Kirwan JA,Weber RJ,Broadhurst DI,Viant MR

更新日期：2014-06-10 00:00:00

abstract：:Brain atlases that encompass detailed anatomical or physiological features are instrumental in the research and surgical planning of various neurological conditions. Magnetic resonance imaging (MRI) has played important roles in neuro-image analysis while histological data remain crucial as a gold standard to guide an...

journal_title：Scientific data

authors： Xiao Y,Lau JC,Anderson T,DeKraker J,Collins DL,Peters T,Khan AR

更新日期：2019-10-17 00:00:00

abstract：:In response to the COVID-19 pandemic, governments have implemented a wide range of non-pharmaceutical interventions (NPIs). Monitoring and documenting government strategies during the COVID-19 crisis is crucial to understand the progression of the epidemic. Following a content analysis strategy of existing public info...

journal_title：Scientific data

authors： Desvars-Larrive A,Dervic E,Haug N,Niederkrotenthaler T,Chen J,Di Natale A,Lasser J,Gliga DS,Roux A,Sorger J,Chakraborty A,Ten A,Dervic A,Pacheco A,Jurczak A,Cserjan D,Lederhilger D,Bulska D,Berishaj D,Tames EF,Álv

更新日期：2020-08-27 00:00:00

abstract：:RAS genes are frequently mutated in cancer and have for decades eluded effective therapeutic attack. The National Cancer Institute's RAS Initiative has a focus on understanding pathways and discovering therapies for RAS-driven cancers. Part of these efforts is the generation of novel reagents to enable the quantificat...

journal_title：Scientific data

authors： Schoenherr RM,Huang D,Voytovich UJ,Ivey RG,Kennedy JJ,Saul RG,Colantonio S,Roberts RR,Knotts JG,Kaczmarczyk JA,Perry C,Hewitt SM,Bocik W,Whiteley GR,Hiltke T,Boja ES,Rodriguez H,Whiteaker JR,Paulovich AG

更新日期：2019-08-29 00:00:00

abstract：:Advances in high-throughput sequencing are reshaping how we perceive microbial communities inhabiting the human body, with implications for therapeutic interventions. Several large-scale datasets derived from hundreds of human microbiome samples sourced from multiple studies are now publicly available. However, idiosy...

journal_title：Scientific data

authors： Hahn AS,Altman T,Konwar KM,Hanson NW,Kim D,Relman DA,Dill DL,Hallam SJ

更新日期：2017-04-11 00:00:00

abstract：:Lysosomes are the main degradative organelles of cells and involved in a variety of processes including the recycling of macromolecules, storage of compounds, and metabolic signaling. Despite an increasing interest in the proteomic analysis of lysosomes, no systematic study of sample preparation protocols for lysosome...

journal_title：Scientific data

authors： Ponnaiyan S,Akter F,Singh J,Winter D

更新日期：2020-02-26 00:00:00

abstract：:The spotted hyena (Crocuta crocuta), one of the largest terrestrial predators native to sub-Saharan Africa, is well known for its matriarchal social system and large-sized social group in which larger females dominate smaller males. Spotted hyenas are highly adaptable predators as they both actively hunt prey and scav...

journal_title：Scientific data

authors： Yang C,Li F,Xiong Z,Koepfli KP,Ryder O,Perelman P,Li Q,Zhang G

更新日期：2020-04-28 00:00:00