Abstract:
:The silkmoth chorion was studied extensively by F.C. Kafatos' group for almost 40 years. However, the complete structure of the chorion locus was not obtained in the genome sequence of Bombyx mori published in 2008 due to repetitive sequences, resulting in gaps and an incomplete view of the locus. To obtain the complete sequence of the chorion locus, expressed sequence tags (ESTs) derived from follicular epithelium cells were used as probes to screen a bacterial artificial chromosome (BAC) library. Seven BACs were selected to construct a contig which covered the whole chorion locus. By Sanger sequencing, we successfully obtained complete sequences of the chorion locus spanning 871,711 base pairs on chromosome 2, where we annotated 127 chorion genes. The dataset reported here will recruit more researchers to revisit one of the oldest model systems which has been used to study developmentally regulated gene expression. It also provides insights into egg development and fertilization mechanisms and is relevant to applications related to improvements in breeding procedures and transgenesis.
journal_name
Sci Datajournal_title
Scientific dataauthors
Chen Z,Nohata J,Guo H,Li S,Liu J,Guo Y,Yamamoto K,Kadono-Okuda K,Liu C,Arunkumar KP,Nagaraju J,Zhang Y,Liu S,Labropoulou V,Swevers L,Tsitoura P,Iatrou K,Gopinathan KP,Goldsmith MR,Xia Q,Mita Kdoi
10.1038/sdata.2015.62subject
Has Abstractpub_date
2015-11-10 00:00:00pages
150062issn
2052-4463journal_volume
2pub_type
杂志文章相关文献
Scientific Data文献大全abstract::Good access to resources and opportunities is essential for sustainable development. Improving access, especially in rural areas, requires useful measures of current access to the locations where these resources and opportunities are found. Recent work has developed a global map of travel times to cities with more tha...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-019-0265-5
更新日期:2019-11-07 00:00:00
abstract::As basic data, the river networks and water resources zones (WRZ) are critical for planning, utilization, development, conservation and management of water resources. Currently, the river network and WRZ of world are most obtained based on digital elevation model data automatically, which are not accuracy enough, espe...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-019-0243-y
更新日期:2019-10-22 00:00:00
abstract::As a World Health Organization Research and Development Blueprint priority pathogen, there is a need to better understand the geographic distribution of Middle East Respiratory Syndrome Coronavirus (MERS-CoV) and its potential to infect mammals and humans. This database documents cases of MERS-CoV globally, with speci...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-019-0330-0
更新日期:2019-12-13 00:00:00
abstract::In response to the COVID-19 pandemic, governments have implemented a wide range of non-pharmaceutical interventions (NPIs). Monitoring and documenting government strategies during the COVID-19 crisis is crucial to understand the progression of the epidemic. Following a content analysis strategy of existing public info...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-020-00609-9
更新日期:2020-08-27 00:00:00
abstract::Orchids are renowned for their spectacular flowers and ecological adaptations. After the sequencing of the genome of the tropical epiphytic orchid Phalaenopsis equestris, we combined Illumina HiSeq2000 for RNA-Seq and Trinity for de novo assembly to characterize the transcriptomes for 11 diverse P. equestris tissues r...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/sdata.2016.83
更新日期:2016-09-27 00:00:00
abstract::While the GRACE (Gravity Recovery and Climate Experiment) satellite mission is of great significance in understanding various branches of Earth sciences, the quality of GRACE monthly products can be unsatisfactory due to strong longitudinal stripe-pattern errors and other flaws. Based on corrected GRACE Mascon (mass c...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-019-0239-7
更新日期:2019-10-23 00:00:00
abstract::The data record contains Material Intensity data for buildings (MI). MI coefficients are often used for different types of analysis of socio-economic systems and in particular for environmental assessments. Until now, MI values were compiled and reported ad-hoc with few cross-study comparisons. We extracted and conver...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-019-0021-x
更新日期:2019-04-09 00:00:00
abstract::Rett syndrome (RTT) is a rare neurological disorder mostly caused by a genetic variation in MECP2. Making new MECP2 variants and the related phenotypes available provides data for better understanding of disease mechanisms and faster identification of variants for diagnosis. This is, however, currently hampered by the...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-020-00794-7
更新日期:2021-01-15 00:00:00
abstract::In this paper we analyse the spatial footprint and temporal clustering of extreme sea level and skew surge events around the UK coast over the last 100 years (1915-2014). The vast majority of the extreme sea level events are generated by moderate, rather than extreme skew surges, combined with spring astronomical high...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/sdata.2016.107
更新日期:2016-12-06 00:00:00
abstract::We present a test-retest dataset for evaluation of long-term reliability of measures from structural and resting-state functional magnetic resonance imaging (sMRI and rfMRI) scans. The repeated scan dataset was collected from 61 healthy adults in two sessions using highly similar imaging parameters at an interval of 1...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/sdata.2016.16
更新日期:2016-03-15 00:00:00
abstract::Understanding of sequence diversity is the cornerstone of analysis of genetic disorders, population genetics, and evolutionary biology. Here, we present an update of our sequencing set to 15,220 Icelanders who we sequenced to an average genome-wide coverage of 34X. We identified 39,020,168 autosomal variants passing G...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/sdata.2017.115
更新日期:2017-09-21 00:00:00
abstract::The immune response to major trauma has been analysed mainly within post-hospital admission settings where the inflammatory response is already underway and the early drivers of clinical outcome cannot be readily determined. Thus, there is a need to better understand the immediate immune response to injury and how thi...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-019-0337-6
更新日期:2019-12-19 00:00:00
abstract::Bumblebees (Hymenoptera: Apidae) are important pollinating insects that play pivotal roles in crop production and natural ecosystem services. Although protein-coding genes in bumblebees have been extensively annotated, regulatory sequences of the genome, such as promoters and enhancers, have been poorly annotated. To ...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-020-00713-w
更新日期:2020-10-26 00:00:00
abstract::Many animal phyla have no representatives within the catalog of whole metazoan genome sequences. This dataset fills in one gap in the genome knowledge of animal phyla with a draft genome of Bugula neritina (phylum Bryozoa). Interest in this species spans ecology and biomedical sciences because B. neritina is the natur...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-020-00684-y
更新日期:2020-10-20 00:00:00
abstract::Brittle faults and fault zones are important fluid flow conduits through the upper part of Earth's crust that are involved in many well-known phenomena (e.g. earthquakes, thermal water and gas transport, or water leakage to underground tunnels). The permeability property, or the ability of porous materials to conduct ...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-020-0435-5
更新日期:2020-03-19 00:00:00
abstract::Efforts to identify meaningful functional imaging-based biomarkers are limited by the ability to reliably characterize inter-individual differences in human brain function. Although a growing number of connectomics-based measures are reported to have moderate to high test-retest reliability, the variability in data ac...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/sdata.2014.49
更新日期:2014-12-09 00:00:00
abstract::Human adenoviruses (HAdVs) are fatal to immuno-suppressed individuals, but no effective anti-HAdV therapy is available. Here, we present a novel image-based high-throughput screening (HTS) platform, which scores the full viral replication cycle from virus entry to dissemination of progeny and second-round infections. ...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-020-00604-0
更新日期:2020-08-12 00:00:00
abstract::Spatio-temporal data on human population and its driving factors is critical to understanding and responding to population problems. Unfortunately, such spatio-temporal data on a large scale and over the long term are often difficult to obtain. Here, we present a dataset on Chinese population distribution and its driv...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/sdata.2016.47
更新日期:2016-07-05 00:00:00
abstract::We have developed a new coastal database for the Mediterranean basin that is intended for coastal impact and adaptation assessment to sea-level rise and associated hazards on a regional scale. The data structure of the database relies on a linear representation of the coast with associated spatial assessment units. Us...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/sdata.2018.44
更新日期:2018-03-27 00:00:00
abstract::Temporal lobe epilepsy (TLE) can develop from alterations in hippocampal structure and circuit characteristics, and can be modeled in mice by administration of kainic acid (KA). Adult neurogenesis in the dentate gyrus (DG) contributes to hippocampal functions and has been reported to contribute to the development of T...
journal_title:Scientific data
pub_type: 评论,杂志文章
doi:10.1038/sdata.2016.68
更新日期:2016-08-16 00:00:00
abstract::Accurately characterizing land surface changes with Earth Observation requires geo-located ground truth. In the European Union (EU), a tri-annual surveyed sample of land cover and land use has been collected since 2006 under the Land Use/Cover Area frame Survey (LUCAS). A total of 1351293 observations at 651780 unique...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-020-00675-z
更新日期:2020-10-16 00:00:00
abstract::Tardigrades are ubiquitous microscopic animals that play an important role in the study of metazoan phylogeny. Most terrestrial tardigrades can withstand extreme environments by entering an ametabolic desiccated state termed anhydrobiosis. Due to their small size and the non-axenic nature of laboratory cultures, molec...
journal_title:Scientific data
pub_type: 评论,杂志文章
doi:10.1038/sdata.2016.63
更新日期:2016-08-16 00:00:00
abstract::Fully-automated nuclear image segmentation is the prerequisite to ensure statistically significant, quantitative analyses of tissue preparations,applied in digital pathology or quantitative microscopy. The design of segmentation methods that work independently of the tissue type or preparation is complex, due to varia...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-020-00608-w
更新日期:2020-08-11 00:00:00
abstract::In angiogenesis with concurrent inflammation, many pathways are activated, some linked to VEGF and others largely VEGF-independent. Pathways involving inflammatory mediators, chemokines, and micro-RNAs may play important roles in maintaining a pro-angiogenic environment or mediating angiogenic regression. Here, we des...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/sdata.2016.103
更新日期:2016-11-22 00:00:00
abstract::The big-headed turtle, Platysternon megacephalum, as the sole member of the monotypic family Platysternidae, has a number of distinct characteristics including an extra-large head, long tail, flat carapace, and a preference for low water temperature environments. We performed whole genome sequencing, assembly, and gen...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-019-0067-9
更新日期:2019-05-16 00:00:00
abstract::Semiconducting inorganic materials with band gaps ranging between 0 and 5 eV constitute major components in electronic, optoelectronic and photovoltaic devices. Since the band gap is a primary material property that affects the device performance, large band-gap databases are useful in selecting optimal materials in e...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-020-00723-8
更新日期:2020-11-11 00:00:00
abstract::This corrects the article DOI: 10.1038/sdata.2017.139. ...
journal_title:Scientific data
pub_type: 杂志文章,已发布勘误
doi:10.1038/sdata.2018.215
更新日期:2018-10-09 00:00:00
abstract::Phase contrast time-lapse microscopy is a non-destructive technique that generates large volumes of image-based information to quantify the behaviour of individual cells or cell populations. To guide the development of algorithms for computer-aided cell tracking and analysis, 48 time-lapse image sequences, each spanni...
journal_title:Scientific data
pub_type:
doi:10.1038/sdata.2018.237
更新日期:2018-11-13 00:00:00
abstract::We provide a detailed description of a gadoteridol-derivatized lysozyme (gadolinium lysozyme) two-colour serial femtosecond crystallography (SFX) dataset for multiple wavelength anomalous dispersion (MAD) structure determination. The data was collected at the Spring-8 Angstrom Compact free-electron LAser (SACLA) facil...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/sdata.2017.188
更新日期:2017-12-12 00:00:00
abstract::The COVID-19 pandemic has ignited interest in age-specific manifestations of infection but surprisingly little is known about relative severity of infectious disease between the extremes of age. In a systematic analysis we identified 142 datasets with information on severity of disease by age for 32 different infectio...
journal_title:Scientific data
pub_type: 杂志文章
doi:10.1038/s41597-020-00668-y
更新日期:2020-10-15 00:00:00