Genome sequencing of a single tardigrade Hypsibius dujardini individual.

abstract：:The nuclear receptor estrogen receptor 2 (ESR2, ERβ) modulates cancer cell proliferation and tumor growth, exerting an oncosuppressive role in breast cancer (BC). Interaction proteomics by tandem affinity purification coupled to mass spectrometry was previously applied in BC cells to identify proteins acting in concer...

journal_title：Scientific data

authors： Giurato G,Nassa G,Salvati A,Alexandrova E,Rizzo F,Nyman TA,Weisz A,Tarallo R

更新日期：2018-03-06 00:00:00

abstract：:Motion capture is necessary to quantify gait deviations in individuals with lower-limb amputations. However, access to the patient population and the necessary equipment is limited. Here we present the first open biomechanics dataset for 18 individuals with unilateral above-knee amputations walking at different speeds...

journal_title：Scientific data

authors： Hood S,Ishmael MK,Gunnell A,Foreman KB,Lenzi T

更新日期：2020-05-21 00:00:00

abstract：:Benthic fauna refers to all fauna that live in or on the seafloor, which researchers typically divide into size classes meiobenthos (32/64 µm-0.5/1 mm), macrobenthos (250 µm-1 cm), and megabenthos (>1 cm). Benthic fauna play important roles in bioturbation activity, mineralization of organic matter, and in marine food...

journal_title：Scientific data

authors： Stratmann T,van Oevelen D,Martínez Arbizu P,Wei CL,Liao JX,Cusson M,Scrosati RA,Archambault P,Snelgrove PVR,Ramey-Balci PA,Burd BJ,Kenchington E,Gilkinson K,Belley R,Soetaert K

更新日期：2020-06-29 00:00:00

abstract：:The Serengeti ecosystem spans an extensive network of protected areas in Tanzania, eastern Africa, and a UNESCO Wold Heritage Site. It is home to some of the largest animal migrations on the planet. Here, we describe a dataset consisting of the sample counts of three age classes (infant, juvenile and adult) of 13 ungu...

journal_title：Scientific data

authors： Rogy P,Sinclair ARE

更新日期：2020-10-21 00:00:00

abstract：:Fully-automated nuclear image segmentation is the prerequisite to ensure statistically significant, quantitative analyses of tissue preparations,applied in digital pathology or quantitative microscopy. The design of segmentation methods that work independently of the tissue type or preparation is complex, due to varia...

journal_title：Scientific data

authors： Kromp F,Bozsaky E,Rifatbegovic F,Fischer L,Ambros M,Berneder M,Weiss T,Lazic D,Dörr W,Hanbury A,Beiske K,Ambros PF,Ambros IM,Taschner-Mandl S

更新日期：2020-08-11 00:00:00

abstract：:We introduce and make openly accessible a comprehensive, multivariate time series (MVTS) dataset extracted from solar photospheric vector magnetograms in Spaceweather HMI Active Region Patch (SHARP) series. Our dataset also includes a cross-checked NOAA solar flare catalog that immediately facilitates solar flare pred...

journal_title：Scientific data

authors： Angryk RA,Martens PC,Aydin B,Kempton D,Mahajan SS,Basodi S,Ahmadzadeh A,Cai X,Filali Boubrahimi S,Hamdi SM,Schuh MA,Georgoulis MK

更新日期：2020-07-10 00:00:00

abstract：:Long-term exposure to air pollution is considered a major public health concern and has been related to overall mortality and various diseases such as respiratory and cardiovascular disease. Due to the spatial variability of air pollution concentrations, assessment of individual exposure to air pollution requires spat...

journal_title：Scientific data

authors： Schmitz O,Beelen R,Strak M,Hoek G,Soenario I,Brunekreef B,Vaartjes I,Dijst MJ,Grobbee DE,Karssenberg D

更新日期：2019-03-12 00:00:00

abstract：:As basic data, the river networks and water resources zones (WRZ) are critical for planning, utilization, development, conservation and management of water resources. Currently, the river network and WRZ of world are most obtained based on digital elevation model data automatically, which are not accuracy enough, espe...

journal_title：Scientific data

authors： Yan D,Wang K,Qin T,Weng B,Wang H,Bi W,Li X,Li M,Lv Z,Liu F,He S,Ma J,Shen Z,Wang J,Bai H,Man Z,Sun C,Liu M,Shi X,Jing L,Sun R,Cao S,Hao C,Wang L,Pei M,Dorjsuren B,Gedefaw M,Girma A,Abiyu A

更新日期：2019-10-22 00:00:00

abstract：:In this paper we analyse the spatial footprint and temporal clustering of extreme sea level and skew surge events around the UK coast over the last 100 years (1915-2014). The vast majority of the extreme sea level events are generated by moderate, rather than extreme skew surges, combined with spring astronomical high...

journal_title：Scientific data

authors： Haigh ID,Wadey MP,Wahl T,Ozsoy O,Nicholls RJ,Brown JM,Horsburgh K,Gouldby B

更新日期：2016-12-06 00:00:00

abstract：:We provide a detailed description of a gadoteridol-derivatized lysozyme (gadolinium lysozyme) two-colour serial femtosecond crystallography (SFX) dataset for multiple wavelength anomalous dispersion (MAD) structure determination. The data was collected at the Spring-8 Angstrom Compact free-electron LAser (SACLA) facil...

journal_title：Scientific data

authors： Gorel A,Motomura K,Fukuzawa H,Doak RB,Grünbein ML,Hilpert M,Inoue I,Kloos M,Nass Kovács G,Nango E,Nass K,Roome CM,Shoeman RL,Tanaka R,Tono K,Foucar L,Joti Y,Yabashi M,Iwata S,Ueda K,Barends TRM,Schlichting I

更新日期：2017-12-12 00:00:00

abstract：:With the help of the bacteria in the rumen, ruminants can effectively convert human inedible plant fiber to edible food (meat and milk). However, the understanding of rumen bacteriome in dairy cows is still limited, especially in a large population under the same diet, breed, and milking period. Here we described the ...

journal_title：Scientific data

authors： Sun HZ,Xue M,Guan LL,Liu J

更新日期：2019-01-22 00:00:00

abstract：:Geological structures are by nature inaccessible to direct observation. This can cause difficulties in applications where a spatially explicit representation of such structures is required, in particular when modelling fluid migration in geological formations. An increasing trend in recent years has been to use analog...

journal_title：Scientific data

authors： Bayer P,Comunian A,Höyng D,Mariethoz G

更新日期：2015-07-07 00:00:00

abstract：:A synthesis of phenotypic and quantitative genomic traits is provided for bacteria and archaea, in the form of a scripted, reproducible workflow that standardizes and merges 26 sources. The resulting unified dataset covers 14 phenotypic traits, 5 quantitative genomic traits, and 4 environmental characteristics for app...

journal_title：Scientific data

authors： Madin JS,Nielsen DA,Brbic M,Corkrey R,Danko D,Edwards K,Engqvist MKM,Fierer N,Geoghegan JL,Gillings M,Kyrpides NC,Litchman E,Mason CE,Moore L,Nielsen SL,Paulsen IT,Price ND,Reddy TBK,Richards MA,Rocha EPC,Schmidt

更新日期：2020-06-05 00:00:00

abstract：:In this work, we compare the resolution of V2-V3 and V3-V4 16S rRNA regions for the purposes of estimating microbial community diversity using paired-end Illumina MiSeq reads, and show that the fragment, including V2 and V3 regions, has higher resolution for lower-rank taxa (genera and species). It allows for a more p...

journal_title：Scientific data

authors： Bukin YS,Galachyants YP,Morozov IV,Bukin SV,Zakharenko AS,Zemskaya TI

更新日期：2019-02-05 00:00:00

abstract：:An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

journal_title：Scientific data

authors： Nowak RM,Jastrzębski JP,Kuśmirek W,Sałamatin R,Rydzanicz M,Sobczyk-Kopcioł A,Sulima-Celińska A,Paukszto Ł,Makowczenko KG,Płoski R,Tkach VV,Basałaj K,Młocicki D

更新日期：2020-02-10 00:00:00

abstract：:Olympia oysters are found along the west coast of North America and as the only native oyster species in the region, receive considerable attention with regard to restoration and conservation. Knowledge of genetic structure of this species is essential for resource managers. Here we provide genetic data for three dist...

journal_title：Scientific data

authors： White SJ,Vadopalas B,Silliman K,Roberts SB

更新日期：2017-09-12 00:00:00

abstract：:Medical augmented reality (AR) is an increasingly important topic in many medical fields. AR enables x-ray vision to see through real world objects. In medicine, this offers pre-, intra- or post-interventional visualization of "hidden" structures. In contrast to a classical monitor view, AR applications provide visual...

journal_title：Scientific data

authors： Gsaxner C,Wallner J,Chen X,Zemann W,Egger J

更新日期：2019-12-09 00:00:00

abstract：:The spotted hyena (Crocuta crocuta), one of the largest terrestrial predators native to sub-Saharan Africa, is well known for its matriarchal social system and large-sized social group in which larger females dominate smaller males. Spotted hyenas are highly adaptable predators as they both actively hunt prey and scav...

journal_title：Scientific data

authors： Yang C,Li F,Xiong Z,Koepfli KP,Ryder O,Perelman P,Li Q,Zhang G

更新日期：2020-04-28 00:00:00

abstract：:Gene-gene (GXG) and gene-environment (GXE) interactions play important roles in pharmacogenetics study. Simultaneously incorporating multiple single nucleotide polymorphisms (SNPs) and clinical factors is needed to explore the association of their interactions with drug response and toxicity phenotypes. We genotyped 5...

journal_title：Scientific data

authors： Wang LY,Cui JJ,Liu JY,Guo AX,Zhao ZY,Liu YZ,Wu JC,Li M,Hu CP,Gao Y,Zhou HH,Yin JY

更新日期：2018-12-11 00:00:00

abstract：:Studies of chimpanzee vocal communication provide valuable insights into the evolution of communication in complex societies, and also comparative data for understanding the evolution of human language. One particularly valuable dataset of recordings from free-living chimpanzees was collected by Frans X. Plooij and th...

journal_title：Scientific data

authors： Plooij FX,van de Rijt-Plooij H,Fischer M,Wilson ML,Pusey A

更新日期：2015-05-26 00:00:00

abstract：:Orchids are renowned for their spectacular flowers and ecological adaptations. After the sequencing of the genome of the tropical epiphytic orchid Phalaenopsis equestris, we combined Illumina HiSeq2000 for RNA-Seq and Trinity for de novo assembly to characterize the transcriptomes for 11 diverse P. equestris tissues r...

journal_title：Scientific data

authors： Niu SC,Xu Q,Zhang GQ,Zhang YQ,Tsai WC,Hsu JL,Liang CK,Luo YB,Liu ZJ

更新日期：2016-09-27 00:00:00

abstract：:The use of DNA metabarcoding to characterise the biodiversity of environmental and community samples has exploded in recent years. However, taxonomic inferences from these studies are contingent on the quality and completeness of the sequence reference database used to characterise sample species-composition. In respo...

journal_title：Scientific data

authors： Arranz V,Pearman WS,Aguirre JD,Liggins L

更新日期：2020-07-03 00:00:00

abstract：:Rett syndrome (RTT) is a rare neurological disorder mostly caused by a genetic variation in MECP2. Making new MECP2 variants and the related phenotypes available provides data for better understanding of disease mechanisms and faster identification of variants for diagnosis. This is, however, currently hampered by the...

journal_title：Scientific data

authors： Ehrhart F,Jacobsen A,Rigau M,Bosio M,Kaliyaperumal R,Laros JFJ,Willighagen EL,Valencia A,Roos M,Capella-Gutierrez S,Curfs LMG,Evelo CT

更新日期：2021-01-15 00:00:00

abstract：:Spatio-temporal data on human population and its driving factors is critical to understanding and responding to population problems. Unfortunately, such spatio-temporal data on a large scale and over the long term are often difficult to obtain. Here, we present a dataset on Chinese population distribution and its driv...

journal_title：Scientific data

authors： Wang L,Chen L

更新日期：2016-07-05 00:00:00

abstract：:Orchid epiphytes, a group containing at least 18,000 species, thrive in habitats that often undergo periodic drought stress. However, few global gene expression profiling datasets have been published for studies addressing the drought-resistant mechanism of this special population. In this study, an experiment involvi...

journal_title：Scientific data

authors： Wan X,Zou LH,Zheng BQ,Tian YQ,Wang Y

更新日期：2018-10-30 00:00:00

abstract：:The insights that historical evidence of human presence and man-made documents provide are unique. For example, using historical data may be critical to adequately understand the ecological requirements of species. However, historical information about freshwater species distribution remains largely a knowledge gap. I...

journal_title：Scientific data

authors： Duarte G,Moreira M,Branco P,da Costa L,Ferreira MT,Segurado P

更新日期：2018-08-14 00:00:00

abstract：:Phase contrast time-lapse microscopy is a non-destructive technique that generates large volumes of image-based information to quantify the behaviour of individual cells or cell populations. To guide the development of algorithms for computer-aided cell tracking and analysis, 48 time-lapse image sequences, each spanni...

journal_title：Scientific data

authors： Ker DFE,Eom S,Sanami S,Bise R,Pascale C,Yin Z,Huh SI,Osuna-Highley E,Junkers SN,Helfrich CJ,Liang PY,Pan J,Jeong S,Kang SS,Liu J,Nicholson R,Sandbothe MF,Van PT,Liu A,Chen M,Kanade T,Weiss LE,Campbell PG

更新日期：2018-11-13 00:00:00

abstract：:Understanding dynamic human mobility changes and spatial interaction patterns at different geographic scales is crucial for assessing the impacts of non-pharmaceutical interventions (such as stay-at-home orders) during the COVID-19 pandemic. In this data descriptor, we introduce a regularly-updated multiscale dynamic ...

journal_title：Scientific data

authors： Kang Y,Gao S,Liang Y,Li M,Rao J,Kruse J

更新日期：2020-11-12 00:00:00

abstract：:Soybean aphid (Aphis glycines; SBA) and soybean cyst nematode (Heterodera glycines; SCN) are two major pests of soybean (Glycine max) in the United States of America. This study aims to characterize three-way interactions among soybean, SBA, and SCN using both demographic and genetic datasets. SCN-resistant and SCN-su...

journal_title：Scientific data

authors： Neupane S,Mathew FM,Varenhorst AJ,Nepal MP

更新日期：2019-07-24 00:00:00

abstract：:Hydrologic soil groups (HSGs) are a fundamental component of the USDA curve-number (CN) method for estimation of rainfall runoff; yet these data are not readily available in a format or spatial-resolution suitable for regional- and global-scale modeling applications. We developed a globally consistent, gridded dataset...

journal_title：Scientific data

authors： Ross CW,Prihodko L,Anchang J,Kumar S,Ji W,Hanan NP

更新日期：2018-05-15 00:00:00