A collection of rumen bacteriome data from 334 mid-lactation dairy cows.

abstract：:Disease surveillance systems worldwide face increasing pressure to maintain and distribute data in usable formats supplemented with effective visualizations to enable actionable policy and programming responses. Annual reports and interactive portals provide access to surveillance data and visualizations depicting tem...

journal_title：Scientific data

authors： Simpson RB,Zhou B,Alarcon Falconi TM,Naumova EN

更新日期：2020-10-13 00:00:00

abstract：:Mesenchymal stem/stromal cells (MSCs) were identified in most tissues of an adult organism. MSCs mediate physiological renewal, as well as regulation of tissue homeostasis, reparation and regeneration. Functions of MSCs are regulated by endocrine and neuronal signals, and noradrenaline is one of the most important MSC...

journal_title：Scientific data

authors： Tyurin-Kuzmin PA,Dyikanov DT,Fadeeva JI,Sysoeva VY,Kalinina NI

更新日期：2018-10-02 00:00:00

abstract：:Efforts to identify meaningful functional imaging-based biomarkers are limited by the ability to reliably characterize inter-individual differences in human brain function. Although a growing number of connectomics-based measures are reported to have moderate to high test-retest reliability, the variability in data ac...

journal_title：Scientific data

authors： Zuo XN,Anderson JS,Bellec P,Birn RM,Biswal BB,Blautzik J,Breitner JC,Buckner RL,Calhoun VD,Castellanos FX,Chen A,Chen B,Chen J,Chen X,Colcombe SJ,Courtney W,Craddock RC,Di Martino A,Dong HM,Fu X,Gong Q,Gorgolews

更新日期：2014-12-09 00:00:00

abstract：:Rett syndrome is an X-linked neurodevelopmental disorder caused by mutation in the methyl-CpG-binding protein 2 gene (MECP2) in the majority of cases. We describe an RNA sequencing dataset of postmortem brain tissue samples from four females clinically diagnosed with Rett syndrome and four age-matched female donors. T...

journal_title：Scientific data

authors： Aldinger KA,Timms AE,MacDonald JW,McNamara HK,Herstein JS,Bammler TK,Evgrafov OV,Knowles JA,Levitt P

更新日期：2020-06-19 00:00:00

abstract：:Coral reefs are under increasingly severe threat from climate change and other anthropogenic stressors. Anomalously high seawater temperatures in particular are known to cause coral bleaching (loss of algal symbionts in the family Symbiodiniaceae), which frequently leads to coral mortality. Remote sensing of sea surfa...

journal_title：Scientific data

authors： Helmuth B,Leichter JJ,Rotjan RD,Castillo KD,Fieseler C,Jones S,Choi F

更新日期：2020-11-16 00:00:00

abstract：:Rett syndrome (RTT) is a rare neurological disorder mostly caused by a genetic variation in MECP2. Making new MECP2 variants and the related phenotypes available provides data for better understanding of disease mechanisms and faster identification of variants for diagnosis. This is, however, currently hampered by the...

journal_title：Scientific data

authors： Ehrhart F,Jacobsen A,Rigau M,Bosio M,Kaliyaperumal R,Laros JFJ,Willighagen EL,Valencia A,Roos M,Capella-Gutierrez S,Curfs LMG,Evelo CT

更新日期：2021-01-15 00:00:00

abstract：:Magnetic resonance angiography (MRA) can capture the variation of cerebral arteries with high spatial resolution. These measurements include valuable information about the morphology, geometry, and density of brain arteries, which may be useful to identify risk factors for cerebrovascular and neurological diseases at ...

journal_title：Scientific data

authors： Mouches P,Forkert ND

更新日期：2019-04-11 00:00:00

abstract：:Efficient energy consumption at the building level is vital for sustainability. Providing energy efficient systems and solutions requires an understanding of how energy gets consumed. However, there is a general lack of large-scale open datasets about the energy consumption of buildings, which hinders the research. Th...

journal_title：Scientific data

authors： Rashid H,Singh P,Singh A

更新日期：2019-02-19 00:00:00

abstract：:An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

journal_title：Scientific data

authors： Schweiker M,Abdul-Zahra A,André M,Al-Atrash F,Al-Khatri H,Alprianti RR,Alsaad H,Amin R,Ampatzi E,Arsano AY,Azadeh M,Azar E,Bahareh B,Batagarawa A,Becker S,Buonocore C,Cao B,Choi JH,Chun C,Daanen H,Damiati SA,Dan

更新日期：2020-01-06 00:00:00

abstract：:In the wake of the Fukushima nuclear disaster, Japan largely moved away from nuclear power generation and turned back towards an energy sector dominated by fossil fuels. As a result, the pace towards reaching emission reduction targets has largely slowed down. This situation indicates that higher emissions will contin...

journal_title：Scientific data

authors： Long Y,Yoshida Y,Zhang H,Zheng H,Shan Y,Guan D

更新日期：2020-07-13 00:00:00

abstract：:Accurately characterizing land surface changes with Earth Observation requires geo-located ground truth. In the European Union (EU), a tri-annual surveyed sample of land cover and land use has been collected since 2006 under the Land Use/Cover Area frame Survey (LUCAS). A total of 1351293 observations at 651780 unique...

journal_title：Scientific data

authors： d'Andrimont R,Yordanov M,Martinez-Sanchez L,Eiselt B,Palmieri A,Dominici P,Gallego J,Reuter HI,Joebges C,Lemoine G,van der Velde M

更新日期：2020-10-16 00:00:00

abstract：:Neuroblastoma cell lines are an important and cost-effective model used to study oncogenic drivers of the disease. While many of these cell lines have been previously characterized with SNP, methylation, and/or mRNA expression microarrays, there has not been an effort to comprehensively sequence these cell lines. Here...

journal_title：Scientific data

authors： Harenza JL,Diamond MA,Adams RN,Song MM,Davidson HL,Hart LS,Dent MH,Fortina P,Reynolds CP,Maris JM

更新日期：2017-03-28 00:00:00

abstract：:Chest radiography is an extremely powerful imaging modality, allowing for a detailed inspection of a patient's chest, but requires specialized training for proper interpretation. With the advent of high performance general purpose computer vision algorithms, the accurate automated analysis of chest radiographs is beco...

journal_title：Scientific data

authors： Johnson AEW,Pollard TJ,Berkowitz SJ,Greenbaum NR,Lungren MP,Deng CY,Mark RG,Horng S

更新日期：2019-12-12 00:00:00

abstract：:Fully-automated nuclear image segmentation is the prerequisite to ensure statistically significant, quantitative analyses of tissue preparations,applied in digital pathology or quantitative microscopy. The design of segmentation methods that work independently of the tissue type or preparation is complex, due to varia...

journal_title：Scientific data

authors： Kromp F,Bozsaky E,Rifatbegovic F,Fischer L,Ambros M,Berneder M,Weiss T,Lazic D,Dörr W,Hanbury A,Beiske K,Ambros PF,Ambros IM,Taschner-Mandl S

更新日期：2020-08-11 00:00:00

abstract：:Today's scientific data are primarily stored and accessed via centralized Web-based infrastructure. Centralization has advantages but also carries risks such as link rot and content drift, which can hinder scientific progress. It is time to ask whether traditional, centralized Web architecture aligns with scholarly pr...

journal_title：Scientific data

authors： Robinson DC,Hand JA,Madsen MB,McKelvey KR

更新日期：2018-10-23 00:00:00

abstract：:Orchid epiphytes, a group containing at least 18,000 species, thrive in habitats that often undergo periodic drought stress. However, few global gene expression profiling datasets have been published for studies addressing the drought-resistant mechanism of this special population. In this study, an experiment involvi...

journal_title：Scientific data

authors： Wan X,Zou LH,Zheng BQ,Tian YQ,Wang Y

更新日期：2018-10-30 00:00:00

abstract：:Brittle faults and fault zones are important fluid flow conduits through the upper part of Earth's crust that are involved in many well-known phenomena (e.g. earthquakes, thermal water and gas transport, or water leakage to underground tunnels). The permeability property, or the ability of porous materials to conduct ...

journal_title：Scientific data

authors： Scibek J

更新日期：2020-03-19 00:00:00

abstract：:Estuaries are crucial ecosystems where human activities deeply affect numerous ecological functions. Here we present a survey dataset based on the monitoring of fish nursery grounds of the Seine estuary and eastern bay of Seine collected once a year using a beam trawl during three distinct periods (1995-2002, 2008-201...

journal_title：Scientific data

authors： Cariou T,Dubroca L,Vogel C

更新日期：2020-07-13 00:00:00

abstract：:Larval fishes are a useful metric of marine ecosystem state and change, as well as species-specific patterns in phenology. The high level of taxonomic expertise required to identify larval fishes to species level, and the considerable effort required to collect samples, make these data very valuable. Here we collate 3...

journal_title：Scientific data

authors： Smith JA,Miskiewicz AG,Beckley LE,Everett JD,Garcia V,Gray CA,Holliday D,Jordan AR,Keane J,Lara-Lopez A,Leis JM,Matis PA,Muhling BA,Neira FJ,Richardson AJ,Smith KA,Swadling KM,Syahailatua A,Taylor MD,van Ruth PD,W

更新日期：2018-10-16 00:00:00

abstract：:The human HCC1806 cell line is frequently used as a preclinical model for triple negative breast cancer (TNBC). Given that dysregulated epigenetic mechanisms are involved in cancer pathogenesis, emerging therapeutic strategies target chromatin regulators, such as histone deacetylases. A comprehensive understanding of ...

journal_title：Scientific data

authors： Perreault AA,Sprunger DM,Venters BJ

更新日期：2019-03-05 00:00:00

abstract：:The big-headed turtle, Platysternon megacephalum, as the sole member of the monotypic family Platysternidae, has a number of distinct characteristics including an extra-large head, long tail, flat carapace, and a preference for low water temperature environments. We performed whole genome sequencing, assembly, and gen...

journal_title：Scientific data

authors： Cao D,Wang M,Ge Y,Gong S

更新日期：2019-05-16 00:00:00

abstract：:This article presents a practical roadmap for scholarly data repositories to implement data citation in accordance with the Joint Declaration of Data Citation Principles, a synopsis and harmonization of the recommendations of major science policy bodies. The roadmap was developed by the Repositories Expert Group, as p...

journal_title：Scientific data

authors： Fenner M,Crosas M,Grethe JS,Kennedy D,Hermjakob H,Rocca-Serra P,Durand G,Berjon R,Karcher S,Martone M,Clark T

更新日期：2019-04-10 00:00:00

abstract：:The silkmoth chorion was studied extensively by F.C. Kafatos' group for almost 40 years. However, the complete structure of the chorion locus was not obtained in the genome sequence of Bombyx mori published in 2008 due to repetitive sequences, resulting in gaps and an incomplete view of the locus. To obtain the comple...

journal_title：Scientific data

authors： Chen Z,Nohata J,Guo H,Li S,Liu J,Guo Y,Yamamoto K,Kadono-Okuda K,Liu C,Arunkumar KP,Nagaraju J,Zhang Y,Liu S,Labropoulou V,Swevers L,Tsitoura P,Iatrou K,Gopinathan KP,Goldsmith MR,Xia Q,Mita K

更新日期：2015-11-10 00:00:00

abstract：:The immune response to major trauma has been analysed mainly within post-hospital admission settings where the inflammatory response is already underway and the early drivers of clinical outcome cannot be readily determined. Thus, there is a need to better understand the immediate immune response to injury and how thi...

journal_title：Scientific data

authors： Bravo-Merodio L,Acharjee A,Hazeldine J,Bentley C,Foster M,Gkoutos GV,Lord JM

更新日期：2019-12-19 00:00:00

abstract：:Both poly(A) enrichment and ribosomal RNA depletion are commonly used for RNA sequencing. Either has its advantages and disadvantages that may lead to biases in the downstream analyses. To better access these effects, we carried out both ribosomal RNA-depleted and poly(A)-selected RNA-seq for CD4+ T naive cells isolat...

journal_title：Scientific data

authors： Chen L,Yang R,Kwan T,Tang C,Watt S,Zhang Y,Bourque G,Ge B,Downes K,Frontini M,Ouwehand WH,Lin JW,Soranzo N,Pastinen T,Chen L

更新日期：2020-11-09 00:00:00

abstract：:Viruses are highly discriminating in their interactions with host cells and are thought to play a major role in maintaining diversity of environmental microbes. However, large-scale ecological and genomic studies of co-occurring virus-host pairs, required to characterize the mechanistic and genomic foundations of viru...

journal_title：Scientific data

authors： Kauffman KM,Brown JM,Sharma RS,VanInsberghe D,Elsherbini J,Polz M,Kelly L

更新日期：2018-07-03 00:00:00

abstract：:We provide a detailed description of a gadoteridol-derivatized lysozyme (gadolinium lysozyme) two-colour serial femtosecond crystallography (SFX) dataset for multiple wavelength anomalous dispersion (MAD) structure determination. The data was collected at the Spring-8 Angstrom Compact free-electron LAser (SACLA) facil...

journal_title：Scientific data

authors： Gorel A,Motomura K,Fukuzawa H,Doak RB,Grünbein ML,Hilpert M,Inoue I,Kloos M,Nass Kovács G,Nango E,Nass K,Roome CM,Shoeman RL,Tanaka R,Tono K,Foucar L,Joti Y,Yabashi M,Iwata S,Ueda K,Barends TRM,Schlichting I

更新日期：2017-12-12 00:00:00

abstract：:Advances in high-throughput sequencing are reshaping how we perceive microbial communities inhabiting the human body, with implications for therapeutic interventions. Several large-scale datasets derived from hundreds of human microbiome samples sourced from multiple studies are now publicly available. However, idiosy...

journal_title：Scientific data

authors： Hahn AS,Altman T,Konwar KM,Hanson NW,Kim D,Relman DA,Dill DL,Hallam SJ

更新日期：2017-04-11 00:00:00

abstract：:The COVID-19 pandemic has ignited interest in age-specific manifestations of infection but surprisingly little is known about relative severity of infectious disease between the extremes of age. In a systematic analysis we identified 142 datasets with information on severity of disease by age for 32 different infectio...

journal_title：Scientific data

authors： Glynn JR,Moss PAH

更新日期：2020-10-15 00:00:00

abstract：:Semiconducting inorganic materials with band gaps ranging between 0 and 5 eV constitute major components in electronic, optoelectronic and photovoltaic devices. Since the band gap is a primary material property that affects the device performance, large band-gap databases are useful in selecting optimal materials in e...

journal_title：Scientific data

authors： Kim S,Lee M,Hong C,Yoon Y,An H,Lee D,Jeong W,Yoo D,Kang Y,Youn Y,Han S

更新日期：2020-11-11 00:00:00