abstract：:Patient-specific craniofacial implants are used to repair skull bone defects after trauma or surgery. Currently, cranial implants are designed and produced by third-party suppliers, which is usually time-consuming and expensive. Recent advances in additive manufacturing made the in-hospital or in-operation-room fabric...

journal_title：Scientific data

authors： Li J,Gsaxner C,Pepe A,Morais A,Alves V,von Campe G,Wallner J,Egger J

更新日期：2021-01-29 00:00:00

abstract：:Human motion capture is commonly used in various fields, including sport, to analyze, understand, and synthesize kinematic and kinetic data. Specialized computer vision and marker-based optical motion capture techniques constitute the gold-standard for accurate and robust human motion capture. The dataset presented co...

journal_title：Scientific data

authors： Szczęsna A,Błaszczyszyn M,Pawlyta M

更新日期：2021-01-18 00:00:00

abstract：:Rett syndrome (RTT) is a rare neurological disorder mostly caused by a genetic variation in MECP2. Making new MECP2 variants and the related phenotypes available provides data for better understanding of disease mechanisms and faster identification of variants for diagnosis. This is, however, currently hampered by the...

journal_title：Scientific data

authors： Ehrhart F,Jacobsen A,Rigau M,Bosio M,Kaliyaperumal R,Laros JFJ,Willighagen EL,Valencia A,Roos M,Capella-Gutierrez S,Curfs LMG,Evelo CT

更新日期：2021-01-15 00:00:00

abstract：:The experimental dataset presented was collected in an 18 m long and 1 m wide laboratory flume. Low to high flood flows through an urbanized floodplain were modelled. The floodplain bed is rough, modelled with dense artificial grass. A square cylinder array, representing house models, was set on the rough bed. The cyl...

journal_title：Scientific data

authors： Oukacine M,Proust S,Larrarte F,Goutal N

更新日期：2021-01-11 00:00:00

abstract：:Metadata that are structured using principled schemas and that use terms from ontologies are essential to making biomedical data findable and reusable for downstream analyses. The largest source of metadata that describes the experimental protocol, funding, and scientific leadership of clinical studies is ClinicalTria...

journal_title：Scientific data

authors： Miron L,Gonçalves RS,Musen MA

更新日期：2020-12-18 00:00:00

abstract：:The zooplankter Calanus finmarchicus is a member of the so-called "Calanus Complex", a group of copepods that constitutes a key element of the Arctic polar marine ecosystem, providing a crucial link between primary production and higher trophic levels. Climate change induces the shift of C. finmarchicus to higher lati...

journal_title：Scientific data

authors： Payton L,Noirot C,Hoede C,Hüppe L,Last K,Wilcockson D,Ershova EA,Valière S,Meyer B

更新日期：2020-11-24 00:00:00

abstract：:The corneal endothelium maintains corneal transparency; consequently, damage to this endothelium by a number of pathological conditions results in severe vision loss. Publicly available expression databases of human tissues are useful for investigating the pathogenesis of diseases and for developing new therapeutic mo...

journal_title：Scientific data

authors： Tokuda Y,Okumura N,Komori Y,Hanada N,Tashiro K,Koizumi N,Nakano M

更新日期：2020-11-20 00:00:00

abstract：:Coral reefs are under increasingly severe threat from climate change and other anthropogenic stressors. Anomalously high seawater temperatures in particular are known to cause coral bleaching (loss of algal symbionts in the family Symbiodiniaceae), which frequently leads to coral mortality. Remote sensing of sea surfa...

journal_title：Scientific data

authors： Helmuth B,Leichter JJ,Rotjan RD,Castillo KD,Fieseler C,Jones S,Choi F

更新日期：2020-11-16 00:00:00

abstract：:Structural studies of challenging targets such as G protein-coupled receptors (GPCRs) have accelerated during the last several years due to the development of new approaches, including small-wedge and serial crystallography. Here, we describe the deposition of seven datasets consisting of X-ray diffraction images acqu...

journal_title：Scientific data

authors： Marin E,Luginina A,Gusach A,Kovalev K,Bukhdruker S,Khorn P,Polovinkin V,Lyapina E,Rogachev A,Gordeliy V,Mishin A,Cherezov V,Borshchevskiy V

更新日期：2020-11-12 00:00:00

abstract：:Understanding dynamic human mobility changes and spatial interaction patterns at different geographic scales is crucial for assessing the impacts of non-pharmaceutical interventions (such as stay-at-home orders) during the COVID-19 pandemic. In this data descriptor, we introduce a regularly-updated multiscale dynamic ...

journal_title：Scientific data

authors： Kang Y,Gao S,Liang Y,Li M,Rao J,Kruse J

更新日期：2020-11-12 00:00:00

abstract：:Semiconducting inorganic materials with band gaps ranging between 0 and 5 eV constitute major components in electronic, optoelectronic and photovoltaic devices. Since the band gap is a primary material property that affects the device performance, large band-gap databases are useful in selecting optimal materials in e...

journal_title：Scientific data

authors： Kim S,Lee M,Hong C,Yoon Y,An H,Lee D,Jeong W,Yoo D,Kang Y,Youn Y,Han S

更新日期：2020-11-11 00:00:00

abstract：:Both poly(A) enrichment and ribosomal RNA depletion are commonly used for RNA sequencing. Either has its advantages and disadvantages that may lead to biases in the downstream analyses. To better access these effects, we carried out both ribosomal RNA-depleted and poly(A)-selected RNA-seq for CD4+ T naive cells isolat...

journal_title：Scientific data

authors： Chen L,Yang R,Kwan T,Tang C,Watt S,Zhang Y,Bourque G,Ge B,Downes K,Frontini M,Ouwehand WH,Lin JW,Soranzo N,Pastinen T,Chen L

更新日期：2020-11-09 00:00:00

abstract：:Bumblebees (Hymenoptera: Apidae) are important pollinating insects that play pivotal roles in crop production and natural ecosystem services. Although protein-coding genes in bumblebees have been extensively annotated, regulatory sequences of the genome, such as promoters and enhancers, have been poorly annotated. To ...

journal_title：Scientific data

authors： Zhao X,Su L,Xu W,Schaack S,Sun C

更新日期：2020-10-26 00:00:00

abstract：:The Serengeti ecosystem spans an extensive network of protected areas in Tanzania, eastern Africa, and a UNESCO Wold Heritage Site. It is home to some of the largest animal migrations on the planet. Here, we describe a dataset consisting of the sample counts of three age classes (infant, juvenile and adult) of 13 ungu...

journal_title：Scientific data

authors： Rogy P,Sinclair ARE

更新日期：2020-10-21 00:00:00

abstract：:Many animal phyla have no representatives within the catalog of whole metazoan genome sequences. This dataset fills in one gap in the genome knowledge of animal phyla with a draft genome of Bugula neritina (phylum Bryozoa). Interest in this species spans ecology and biomedical sciences because B. neritina is the natur...

journal_title：Scientific data

authors： Rayko M,Komissarov A,Kwan JC,Lim-Fong G,Rhodes AC,Kliver S,Kuchur P,O'Brien SJ,Lopez JV

更新日期：2020-10-20 00:00:00

abstract：:Neural microarchitecture is heterogeneous, varying both across and within brain regions. The consistent identification of regions of interest is one of the most critical aspects in examining neurocircuitry, as these structures serve as the vital landmarks with which to map brain pathways. Access to continuous, three-d...

journal_title：Scientific data

authors： Prasad JA,Balwani AH,Johnson EC,Miano JD,Sampathkumar V,De Andrade V,Fezzaa K,Du M,Vescovi R,Jacobsen C,Kording KP,Gürsoy D,Gray Roncal W,Kasthuri N,Dyer EL

更新日期：2020-10-20 00:00:00

abstract：:Accurately characterizing land surface changes with Earth Observation requires geo-located ground truth. In the European Union (EU), a tri-annual surveyed sample of land cover and land use has been collected since 2006 under the Land Use/Cover Area frame Survey (LUCAS). A total of 1351293 observations at 651780 unique...

journal_title：Scientific data

authors： d'Andrimont R,Yordanov M,Martinez-Sanchez L,Eiselt B,Palmieri A,Dominici P,Gallego J,Reuter HI,Joebges C,Lemoine G,van der Velde M

更新日期：2020-10-16 00:00:00

abstract：:The COVID-19 pandemic has ignited interest in age-specific manifestations of infection but surprisingly little is known about relative severity of infectious disease between the extremes of age. In a systematic analysis we identified 142 datasets with information on severity of disease by age for 32 different infectio...

journal_title：Scientific data

authors： Glynn JR,Moss PAH

更新日期：2020-10-15 00:00:00

abstract：:There are recent studies which aimed to detect the inheritance on the etiology of dental caries exploring oral composition. We present data on the oral microbiota and its relation with dental caries and other factors in monozygotic (MZ) and dizygotic (DZ) twin children. Following clinical investigation, DNA samples we...

journal_title：Scientific data

authors： Kasimoglu Y,Koruyucu M,Birant S,Karacan I,Topcuoglu N,Tuna EB,Gencay K,Seymen F

更新日期：2020-10-13 00:00:00

abstract：:Disease surveillance systems worldwide face increasing pressure to maintain and distribute data in usable formats supplemented with effective visualizations to enable actionable policy and programming responses. Annual reports and interactive portals provide access to surveillance data and visualizations depicting tem...

journal_title：Scientific data

authors： Simpson RB,Zhou B,Alarcon Falconi TM,Naumova EN

更新日期：2020-10-13 00:00:00

abstract：:The detection, identification, and localization of illicit nuclear materials in urban environments is of utmost importance for national security. Most often, the process of performing these operations consists of a team of trained individuals equipped with radiation detection devices that have built-in algorithms to a...

journal_title：Scientific data

authors： Ghawaly JM Jr,Nicholson AD,Peplow DE,Anderson-Cook CM,Myers KL,Archer DE,Willis MJ,Quiter BJ

更新日期：2020-10-05 00:00:00

abstract：:Land-atmosphere interactions at different temporal and spatial scales are important for our understanding of the Earth system and its modeling. The Landscape Evolution Observatory (LEO) at Biosphere 2, managed by the University of Arizona, hosts three nearly identical artificial bare-soil hillslopes with dimensions of...

journal_title：Scientific data

authors： Arevalo J,Zeng X,Durcik M,Sibayan M,Pangle L,Abramson N,Bugaj A,Ng WR,Kim M,Barron-Gafford G,van Haren J,Niu GY,Adams J,Ruiz J,Troch PA

更新日期：2020-09-15 00:00:00

abstract：:We introduce the Precipitation Probability DISTribution (PPDIST) dataset, a collection of global high-resolution (0.1°) observation-based climatologies (1979-2018) of the occurrence and peak intensity of precipitation (P) at daily and 3-hourly time-scales. The climatologies were produced using neural networks trained ...

journal_title：Scientific data

authors： Beck HE,Westra S,Tan J,Pappenberger F,Huffman GJ,McVicar TR,Gründemann GJ,Vergopolan N,Fowler HJ,Lewis E,Verbist K,Wood EF

更新日期：2020-09-11 00:00:00

abstract：:In response to the COVID-19 pandemic, governments have implemented a wide range of non-pharmaceutical interventions (NPIs). Monitoring and documenting government strategies during the COVID-19 crisis is crucial to understand the progression of the epidemic. Following a content analysis strategy of existing public info...

journal_title：Scientific data

authors： Desvars-Larrive A,Dervic E,Haug N,Niederkrotenthaler T,Chen J,Di Natale A,Lasser J,Gliga DS,Roux A,Sorger J,Chakraborty A,Ten A,Dervic A,Pacheco A,Jurczak A,Cserjan D,Lederhilger D,Bulska D,Berishaj D,Tames EF,Álv

更新日期：2020-08-27 00:00:00

abstract：:Human adenoviruses (HAdVs) are fatal to immuno-suppressed individuals, but no effective anti-HAdV therapy is available. Here, we present a novel image-based high-throughput screening (HTS) platform, which scores the full viral replication cycle from virus entry to dissemination of progeny and second-round infections. ...

journal_title：Scientific data

authors： Georgi F,Kuttler F,Murer L,Andriasyan V,Witte R,Yakimovich A,Turcatti G,Greber UF

更新日期：2020-08-12 00:00:00

abstract：:Fully-automated nuclear image segmentation is the prerequisite to ensure statistically significant, quantitative analyses of tissue preparations,applied in digital pathology or quantitative microscopy. The design of segmentation methods that work independently of the tissue type or preparation is complex, due to varia...

journal_title：Scientific data

authors： Kromp F,Bozsaky E,Rifatbegovic F,Fischer L,Ambros M,Berneder M,Weiss T,Lazic D,Dörr W,Hanbury A,Beiske K,Ambros PF,Ambros IM,Taschner-Mandl S

更新日期：2020-08-11 00:00:00

abstract：:This paper describes the release of the detailed building operation data, including electricity consumption and indoor environmental measurements, of the seven-story 11,700-m2 office building located in Bangkok, Thailand. The electricity consumption data (kW) are that of individual air conditioning units, lighting, an...

journal_title：Scientific data

authors： Pipattanasomporn M,Chitalia G,Songsiri J,Aswakul C,Pora W,Suwankawin S,Audomvongseree K,Hoonchareon N

更新日期：2020-07-20 00:00:00

abstract：:Ticks carry pathogens that can cause disease in both animals and humans, and there is a need to monitor the distribution and abundance of ticks and the pathogens they carry to pinpoint potential high risk areas for tick-borne disease transmission. In a joint Scandinavian study, we measured Ixodes ricinus instar abunda...

journal_title：Scientific data

authors： Kjær LJ,Klitgaard K,Soleng A,Edgar KS,Lindstedt HEH,Paulsen KM,Andreassen ÅK,Korslund L,Kjelland V,Slettan A,Stuen S,Kjellander P,Christensson M,Teräväinen M,Baum A,Jensen LM,Bødker R

更新日期：2020-07-16 00:00:00

abstract：:In the wake of the Fukushima nuclear disaster, Japan largely moved away from nuclear power generation and turned back towards an energy sector dominated by fossil fuels. As a result, the pace towards reaching emission reduction targets has largely slowed down. This situation indicates that higher emissions will contin...

journal_title：Scientific data

authors： Long Y,Yoshida Y,Zhang H,Zheng H,Shan Y,Guan D

更新日期：2020-07-13 00:00:00

abstract：:Estuaries are crucial ecosystems where human activities deeply affect numerous ecological functions. Here we present a survey dataset based on the monitoring of fish nursery grounds of the Seine estuary and eastern bay of Seine collected once a year using a beam trawl during three distinct periods (1995-2002, 2008-201...

journal_title：Scientific data

authors： Cariou T,Dubroca L,Vogel C

更新日期：2020-07-13 00:00:00

abstract：:We introduce and make openly accessible a comprehensive, multivariate time series (MVTS) dataset extracted from solar photospheric vector magnetograms in Spaceweather HMI Active Region Patch (SHARP) series. Our dataset also includes a cross-checked NOAA solar flare catalog that immediately facilitates solar flare pred...

journal_title：Scientific data

authors： Angryk RA,Martens PC,Aydin B,Kempton D,Mahajan SS,Basodi S,Ahmadzadeh A,Cai X,Filali Boubrahimi S,Hamdi SM,Schuh MA,Georgoulis MK

更新日期：2020-07-10 00:00:00

abstract：:The use of hydrogen (H2) as a substitute for fossil fuel, which accounts for the majority of the world's energy, is environmentally the most benign option for the reduction of CO2 emissions. This will require gigawatt-scale storage systems and as such, H2 storage in porous rocks in the subsurface will be required. Acc...

journal_title：Scientific data

authors： Hassanpouryouzband A,Joonaki E,Edlmann K,Heinemann N,Yang J

更新日期：2020-07-09 00:00:00

abstract：:Gait analysis has traditionally relied on laborious and lab-based methods. Data from wearable sensors, such as Inertial Measurement Units (IMU), can be analyzed with machine learning to perform gait analysis in real-world environments. This database provides data from thirty participants (fifteen males and fifteen fem...

journal_title：Scientific data

authors： Luo Y,Coppola SM,Dixon PC,Li S,Dennerlein JT,Hu B

更新日期：2020-07-08 00:00:00

abstract：:The use of DNA metabarcoding to characterise the biodiversity of environmental and community samples has exploded in recent years. However, taxonomic inferences from these studies are contingent on the quality and completeness of the sequence reference database used to characterise sample species-composition. In respo...

journal_title：Scientific data

authors： Arranz V,Pearman WS,Aguirre JD,Liggins L

更新日期：2020-07-03 00:00:00

abstract：:Benthic fauna refers to all fauna that live in or on the seafloor, which researchers typically divide into size classes meiobenthos (32/64 µm-0.5/1 mm), macrobenthos (250 µm-1 cm), and megabenthos (>1 cm). Benthic fauna play important roles in bioturbation activity, mineralization of organic matter, and in marine food...

journal_title：Scientific data

authors： Stratmann T,van Oevelen D,Martínez Arbizu P,Wei CL,Liao JX,Cusson M,Scrosati RA,Archambault P,Snelgrove PVR,Ramey-Balci PA,Burd BJ,Kenchington E,Gilkinson K,Belley R,Soetaert K

更新日期：2020-06-29 00:00:00

abstract：:Rett syndrome is an X-linked neurodevelopmental disorder caused by mutation in the methyl-CpG-binding protein 2 gene (MECP2) in the majority of cases. We describe an RNA sequencing dataset of postmortem brain tissue samples from four females clinically diagnosed with Rett syndrome and four age-matched female donors. T...

journal_title：Scientific data

authors： Aldinger KA,Timms AE,MacDonald JW,McNamara HK,Herstein JS,Bammler TK,Evgrafov OV,Knowles JA,Levitt P

更新日期：2020-06-19 00:00:00

abstract：:Serial electron microscopy techniques have proven to be a powerful tool in biology. Unfortunately, the data sets they generate lack robust and accurate automated segmentation algorithms. In this data descriptor publication, we introduce a serial focused ion beam scanning electron microscopy (FIB-SEM) dataset consistin...

journal_title：Scientific data

authors： Ivanchenko MV,Cicconet M,Jandal HA,Wu X,Corey DP,Indzhykulian AA

更新日期：2020-06-17 00:00:00

abstract：:A synthesis of phenotypic and quantitative genomic traits is provided for bacteria and archaea, in the form of a scripted, reproducible workflow that standardizes and merges 26 sources. The resulting unified dataset covers 14 phenotypic traits, 5 quantitative genomic traits, and 4 environmental characteristics for app...

journal_title：Scientific data

authors： Madin JS,Nielsen DA,Brbic M,Corkrey R,Danko D,Edwards K,Engqvist MKM,Fierer N,Geoghegan JL,Gillings M,Kyrpides NC,Litchman E,Mason CE,Moore L,Nielsen SL,Paulsen IT,Price ND,Reddy TBK,Richards MA,Rocha EPC,Schmidt

更新日期：2020-06-05 00:00:00

abstract：:In prokaryotes, protein phosphorylation plays a critical role in regulating a broad spectrum of biological processes and occurs mainly on various amino acids, including serine (S), threonine (T), tyrosine (Y), arginine (R), aspartic acid (D), histidine (H) and cysteine (C) residues of protein substrates. Through liter...

journal_title：Scientific data

authors： Shi Y,Zhang Y,Lin S,Wang C,Zhou J,Peng D,Xue Y

更新日期：2020-05-29 00:00:00

abstract：:Motion capture is necessary to quantify gait deviations in individuals with lower-limb amputations. However, access to the patient population and the necessary equipment is limited. Here we present the first open biomechanics dataset for 18 individuals with unilateral above-knee amputations walking at different speeds...

journal_title：Scientific data

authors： Hood S,Ishmael MK,Gunnell A,Foreman KB,Lenzi T

更新日期：2020-05-21 00:00:00