De novo transcriptomes of 14 gammarid individuals for proteogenomic analysis of seven taxonomic groups.

abstract：:The London Planetree (Platanus acerifolia) are present throughout the world. The tree is considered a greening plant and is commonly planted in streets, parks, and courtyards. The Sycamore lace bug (Corythucha ciliata) is a serious pest of this tree. To determine the molecular mechanism behind the interaction between ...

journal_title：Scientific data

authors： Li F,Wu C,Gao M,Jiao M,Qu C,Gonzalez-Uriarte A,Luo C

更新日期：2019-07-22 00:00:00

abstract：:The mammalian innate immune system senses many bacterial stimuli through the toll-like receptor (TLR) family. Activation of the TLR4 receptor by bacterial lipopolysaccharide (LPS) is the most widely studied TLR pathway due to its central role in host responses to gram-negative bacterial infection and its contribution ...

journal_title：Scientific data

authors： Sun J,Katz S,Dutta B,Wang Z,Fraser ID

更新日期：2017-03-01 00:00:00

abstract：:Studies of chimpanzee vocal communication provide valuable insights into the evolution of communication in complex societies, and also comparative data for understanding the evolution of human language. One particularly valuable dataset of recordings from free-living chimpanzees was collected by Frans X. Plooij and th...

journal_title：Scientific data

authors： Plooij FX,van de Rijt-Plooij H,Fischer M,Wilson ML,Pusey A

更新日期：2015-05-26 00:00:00

abstract：:An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

journal_title：Scientific data

authors： Seyednasrollah B,Young AM,Hufkens K,Milliman T,Friedl MA,Frolking S,Richardson AD

更新日期：2019-11-01 00:00:00

abstract：:East Africa is a drought prone, food and water insecure region with a highly variable climate. This complexity makes rainfall estimation challenging, and this challenge is compounded by low rain gauge densities and inhomogeneous monitoring networks. The dearth of observations is particularly problematic over the past ...

journal_title：Scientific data

authors： Funk C,Nicholson SE,Landsfeld M,Klotter D,Peterson P,Harrison L

更新日期：2015-09-29 00:00:00

abstract：:Preterm birth, or the delivery of an infant prior to 37 weeks of gestation, is a significant cause of infant morbidity and mortality. In the last decade, the advent and continued development of molecular profiling technologies has enabled researchers to generate vast amount of 'omics' data, which together with integra...

journal_title：Scientific data

authors： Sirota M,Thomas CG,Liu R,Zuhl M,Banerjee P,Wong RJ,Quaintance CC,Leite R,Chubiz J,Anderson R,Chappell J,Kim M,Grobman W,Zhang G,Rokas A,England SK,Parry S,Shaw GM,Simpson JL,Thomson E,Butte AJ,March of Dimes Pre

更新日期：2018-11-06 00:00:00

abstract：:Estuaries are crucial ecosystems where human activities deeply affect numerous ecological functions. Here we present a survey dataset based on the monitoring of fish nursery grounds of the Seine estuary and eastern bay of Seine collected once a year using a beam trawl during three distinct periods (1995-2002, 2008-201...

journal_title：Scientific data

authors： Cariou T,Dubroca L,Vogel C

更新日期：2020-07-13 00:00:00

abstract：:Parkinson's disease (PD) is an age-related, chronic and progressive neurodegenerative disorder characterized by a loss of multifocal neurons, resulting in both non-motor and motor symptoms. While several genetic and environmental contributory risk factors have been identified, more exact methods for diagnosing and ass...

journal_title：Scientific data

authors： Valentine MNZ,Hashimoto K,Fukuhara T,Saiki S,Ishikawa KI,Hattori N,Carninci P

更新日期：2019-04-05 00:00:00

abstract：:The corneal endothelium maintains corneal transparency; consequently, damage to this endothelium by a number of pathological conditions results in severe vision loss. Publicly available expression databases of human tissues are useful for investigating the pathogenesis of diseases and for developing new therapeutic mo...

journal_title：Scientific data

authors： Tokuda Y,Okumura N,Komori Y,Hanada N,Tashiro K,Koizumi N,Nakano M

更新日期：2020-11-20 00:00:00

abstract：:Transparent evaluations of FAIRness are increasingly required by a wide range of stakeholders, from scientists to publishers, funding agencies and policy makers. We propose a scalable, automatable framework to evaluate digital resources that encompasses measurable indicators, open source tools, and participation guide...

journal_title：Scientific data

authors： Wilkinson MD,Dumontier M,Sansone SA,Bonino da Silva Santos LO,Prieto M,Batista D,McQuilton P,Kuhn T,Rocca-Serra P,Crosas M,Schultes E

更新日期：2019-09-20 00:00:00

abstract：:Plants use surface receptors to perceive information about many aspects of their local environment. These receptors physically interact to form both steady state and signalling competent complexes. The signalling events downstream of receptor activation impact both plant developmental and immune responses. Here, we pr...

journal_title：Scientific data

authors： Mott GA,Smakowska-Luzan E,Pasha A,Parys K,Howton TC,Neuhold J,Lehner A,Grünwald K,Stolt-Bergner P,Provart NJ,Mukhtar MS,Desveaux D,Guttman DS,Belkhadir Y

更新日期：2019-02-26 00:00:00

abstract：:Monitoring vegetation phenology is critical for quantifying climate change impacts on ecosystems. We present an extensive dataset of 1783 site-years of phenological data derived from PhenoCam network imagery from 393 digital cameras, situated from tropics to tundra across a wide range of plant functional types, biomes...

journal_title：Scientific data

authors： Seyednasrollah B,Young AM,Hufkens K,Milliman T,Friedl MA,Frolking S,Richardson AD

更新日期：2019-10-22 00:00:00

abstract：:The distribution of arbovirus disease transmission is expanding from the tropics and subtropics into temperate regions worldwide. The temperate city of Córdoba, Argentina has been experiencing the emergence of dengue virus, transmitted by the mosquito Aedes aegypti, since 2009, when autochthonous transmission of the v...

journal_title：Scientific data

authors： Robert MA,Tinunin DT,Benitez EM,Ludueña-Almeida FF,Romero M,Stewart-Ibarra AM,Estallo EL

更新日期：2019-11-21 00:00:00

abstract：:Animal muscles must maintain their function and structure while bearing substantial mechanical loads. How muscles withstand persistent mechanical strain is presently not well understood. Understanding the mechanisms by which tissues maintain their complex architecture is a key goal of cell biology. This dataset repres...

journal_title：Scientific data

authors： Perkins AD,Lee MJ,Tanentzapf G

更新日期：2014-03-11 00:00:00

abstract：:The Systems Biology for Infectious Diseases Research program was established by the U.S. National Institute of Allergy and Infectious Diseases to investigate host-pathogen interactions at a systems level. This program generated 47 transcriptomic and proteomic datasets from 30 studies that investigate in vivo and in vi...

journal_title：Scientific data

authors： Aevermann BD,Pickett BE,Kumar S,Klem EB,Agnihothram S,Askovich PS,Bankhead A 3rd,Bolles M,Carter V,Chang J,Clauss TR,Dash P,Diercks AH,Eisfeld AJ,Ellis A,Fan S,Ferris MT,Gralinski LE,Green RR,Gritsenko MA,Hatta M

更新日期：2014-10-14 00:00:00

abstract：:Olympia oysters are found along the west coast of North America and as the only native oyster species in the region, receive considerable attention with regard to restoration and conservation. Knowledge of genetic structure of this species is essential for resource managers. Here we provide genetic data for three dist...

journal_title：Scientific data

authors： White SJ,Vadopalas B,Silliman K,Roberts SB

更新日期：2017-09-12 00:00:00

abstract：:Temporal lobe epilepsy (TLE) can develop from alterations in hippocampal structure and circuit characteristics, and can be modeled in mice by administration of kainic acid (KA). Adult neurogenesis in the dentate gyrus (DG) contributes to hippocampal functions and has been reported to contribute to the development of T...

journal_title：Scientific data

authors： Schouten M,Bielefeld P,Fratantoni SA,Hubens CJ,Piersma SR,Pham TV,Voskuyl RA,Lucassen PJ,Jimenez CR,Fitzsimons CP

更新日期：2016-08-16 00:00:00

abstract：:Disease surveillance systems worldwide face increasing pressure to maintain and distribute data in usable formats supplemented with effective visualizations to enable actionable policy and programming responses. Annual reports and interactive portals provide access to surveillance data and visualizations depicting tem...

journal_title：Scientific data

authors： Simpson RB,Zhou B,Alarcon Falconi TM,Naumova EN

更新日期：2020-10-13 00:00:00

abstract：:As a World Health Organization Research and Development Blueprint priority pathogen, there is a need to better understand the geographic distribution of Middle East Respiratory Syndrome Coronavirus (MERS-CoV) and its potential to infect mammals and humans. This database documents cases of MERS-CoV globally, with speci...

journal_title：Scientific data

authors： Ramshaw RE,Letourneau ID,Hong AY,Hon J,Morgan JD,Osborne JCP,Shirude S,Van Kerkhove MD,Hay SI,Pigott DM

更新日期：2019-12-13 00:00:00

abstract：:Ataxin-1 mutation, arising from a polyglutamine (polyQ) tract expansion, is the underlying genetic cause of the late-onset neurodegenerative disease Spinocerebellar ataxia type 1 (SCA1). To identify protein partners of polyQ-ataxin-1 in neuronal cells under control or stress conditions, here we report our complementar...

journal_title：Scientific data

authors： Zhang S,Williamson NA,Bogoyevitch MA

更新日期：2018-11-20 00:00:00

abstract：:Tardigrades are ubiquitous microscopic animals that play an important role in the study of metazoan phylogeny. Most terrestrial tardigrades can withstand extreme environments by entering an ametabolic desiccated state termed anhydrobiosis. Due to their small size and the non-axenic nature of laboratory cultures, molec...

journal_title：Scientific data

authors： Arakawa K,Yoshida Y,Tomita M

更新日期：2016-08-16 00:00:00

abstract：:The zooplankter Calanus finmarchicus is a member of the so-called "Calanus Complex", a group of copepods that constitutes a key element of the Arctic polar marine ecosystem, providing a crucial link between primary production and higher trophic levels. Climate change induces the shift of C. finmarchicus to higher lati...

journal_title：Scientific data

authors： Payton L,Noirot C,Hoede C,Hüppe L,Last K,Wilcockson D,Ershova EA,Valière S,Meyer B

更新日期：2020-11-24 00:00:00

abstract：:The Serengeti ecosystem spans an extensive network of protected areas in Tanzania, eastern Africa, and a UNESCO Wold Heritage Site. It is home to some of the largest animal migrations on the planet. Here, we describe a dataset consisting of the sample counts of three age classes (infant, juvenile and adult) of 13 ungu...

journal_title：Scientific data

authors： Rogy P,Sinclair ARE

更新日期：2020-10-21 00:00:00

abstract：:Serial electron microscopy techniques have proven to be a powerful tool in biology. Unfortunately, the data sets they generate lack robust and accurate automated segmentation algorithms. In this data descriptor publication, we introduce a serial focused ion beam scanning electron microscopy (FIB-SEM) dataset consistin...

journal_title：Scientific data

authors： Ivanchenko MV,Cicconet M,Jandal HA,Wu X,Corey DP,Indzhykulian AA

更新日期：2020-06-17 00:00:00

abstract：:Gene expression is a biological process regulated at different molecular levels, including chromatin accessibility, transcription, and RNA maturation and transport. In addition, these regulatory mechanisms have strong links with cellular metabolism. Here we present a multi-omics dataset that captures different aspects...

journal_title：Scientific data

authors： Nuño-Cabanes C,Ugidos M,Tarazona S,Martín-Expósito M,Ferrer A,Rodríguez-Navarro S,Conesa A

更新日期：2020-02-27 00:00:00

abstract：:In the wake of the Fukushima nuclear disaster, Japan largely moved away from nuclear power generation and turned back towards an energy sector dominated by fossil fuels. As a result, the pace towards reaching emission reduction targets has largely slowed down. This situation indicates that higher emissions will contin...

journal_title：Scientific data

authors： Long Y,Yoshida Y,Zhang H,Zheng H,Shan Y,Guan D

更新日期：2020-07-13 00:00:00

abstract：:Understanding of sequence diversity is the cornerstone of analysis of genetic disorders, population genetics, and evolutionary biology. Here, we present an update of our sequencing set to 15,220 Icelanders who we sequenced to an average genome-wide coverage of 34X. We identified 39,020,168 autosomal variants passing G...

journal_title：Scientific data

authors： Jónsson H,Sulem P,Kehr B,Kristmundsdottir S,Zink F,Hjartarson E,Hardarson MT,Hjorleifsson KE,Eggertsson HP,Gudjonsson SA,Ward LD,Arnadottir GA,Helgason EA,Helgason H,Gylfason A,Jonasdottir A,Jonasdottir A,Rafnar T,Bes

更新日期：2017-09-21 00:00:00

abstract：:A comprehensive transcriptome analysis of an expressed sequence tag (EST) database of the spider Dolomedes fimbriatus venom glands using single-residue distribution analysis (SRDA) identified 7,169 unique sequences. Mature chains of 163 different toxin-like polypeptides were predicted on the basis of well-established ...

journal_title：Scientific data

authors： Kozlov SA,Lazarev VN,Kostryukova ES,Selezneva OV,Ospanova EA,Alexeev DG,Govorun VM,Grishin EV

更新日期：2014-08-05 00:00:00

abstract：:Mesenchymal stem/stromal cells (MSCs) were identified in most tissues of an adult organism. MSCs mediate physiological renewal, as well as regulation of tissue homeostasis, reparation and regeneration. Functions of MSCs are regulated by endocrine and neuronal signals, and noradrenaline is one of the most important MSC...

journal_title：Scientific data

authors： Tyurin-Kuzmin PA,Dyikanov DT,Fadeeva JI,Sysoeva VY,Kalinina NI

更新日期：2018-10-02 00:00:00

abstract：:This paper presents a dataset obtained from fifty four laboratory experiments of the breaching of fluvial dikes due to flow overtopping. Data were collected on two complementary experimental setups, each consisting of a main channel representing the river, an erodible lateral dike and a floodplain. The dataset covers ...

journal_title：Scientific data

authors： Rifai I,El Kadi Abderrezzak K,Erpicum S,Archambeau P,Violeau D,Pirotton M,Dewals B

更新日期：2019-05-13 00:00:00