Proteome-wide analysis of USP14 substrates revealed its role in hepatosteatosis via stabilization of FASN.

Abstract:

:Ubiquitin-specific protease 14 (USP14) is one of the major proteasome-associated deubiquitinating enzymes critical for proteome homeostasis. However, substrates of USP14 remain largely unknown, hindering the understanding of its functional roles. Here we conduct a comprehensive proteome, ubiquitinome and interactome analysis for USP14 substrate screening. Bioinformatics analysis reveals broad new potential roles of USP14, especially in lipid and carbohydrate metabolism. Among the potential substrates identified, we show that fatty acid synthase (FASN), a key enzyme involved in hepatic lipogenesis, is a bona fide substrate of USP14. USP14 directly interacts with and increases FASN stability. As a result, overexpression of USP14 promotes liver triglyceride accumulation in C57BL/6 mice, whereas genetic ablation or pharmacological inhibition of USP14 ameliorates hepatosteatosis, hyperglycemia and insulin resistance in obese mice. In conclusion, our findings reveal for the first time an indispensable role of USP14 in hepatosteatosis through FASN stabilization.

journal_name

Nat Commun

journal_title

Nature communications

authors

Liu B,Jiang S,Li M,Xiong X,Zhu M,Li D,Zhao L,Qian L,Zhai L,Li J,Lu H,Sun S,Lin J,Lu Y,Li X,Tan M

doi

10.1038/s41467-018-07185-y

subject

Has Abstract

pub_date

2018-11-13 00:00:00

pages

4770

issue

1

issn

2041-1723

pii

10.1038/s41467-018-07185-y

journal_volume

9

pub_type

杂志文章
  • Truly work-like work extraction via a single-shot analysis.

    abstract::The work content of non-equilibrium systems in relation to a heat bath is often analysed in terms of expectation values of an underlying random work variable. However, when optimizing the expectation value of the extracted work, the resulting extraction process is subject to intrinsic fluctuations, uniquely determined...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms2712

    authors: Aberg J

    更新日期:2013-01-01 00:00:00

  • Optical sinc-shaped Nyquist pulses of exceptional quality.

    abstract::Sinc-shaped Nyquist pulses possess a rectangular spectrum, enabling data to be encoded in a minimum spectral bandwidth and satisfying by essence the Nyquist criterion of zero inter-symbol interference (ISI). This property makes them very attractive for communication systems since data transmission rates can be maximiz...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms3898

    authors: Soto MA,Alem M,Amin Shoaie M,Vedadi A,Brès CS,Thévenaz L,Schneider T

    更新日期:2013-01-01 00:00:00

  • Ambipolar solution-processed hybrid perovskite phototransistors.

    abstract::Organolead halide perovskites have attracted substantial attention because of their excellent physical properties, which enable them to serve as the active material in emerging hybrid solid-state solar cells. Here we investigate the phototransistors based on hybrid perovskite films and provide direct evidence for thei...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms9238

    authors: Li F,Ma C,Wang H,Hu W,Yu W,Sheikh AD,Wu T

    更新日期:2015-09-08 00:00:00

  • MIS-11 duration key to disappearance of the Greenland ice sheet.

    abstract::Palaeo data suggest that Greenland must have been largely ice free during Marine Isotope Stage 11 (MIS-11). However, regional summer insolation anomalies were modest during this time compared to MIS-5e, when the Greenland ice sheet likely lost less volume. Thus it remains unclear how such conditions led to an almost c...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms16008

    authors: Robinson A,Alvarez-Solas J,Calov R,Ganopolski A,Montoya M

    更新日期:2017-07-06 00:00:00

  • Harmonious genetic combinations rewire regulatory networks and flip gene essentiality.

    abstract::We lack an understanding of how the full range of genetic variants that occur in individuals can interact. To address this shortcoming, here we combine diverse mutations between genes in a model regulatory network, the galactose (GAL) switch of budding yeast. The effects of thousands of pairs of mutations fall into a ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-11523-z

    authors: New AM,Lehner B

    更新日期:2019-08-14 00:00:00

  • Extreme-ultraviolet high-harmonic generation in liquids.

    abstract::High-harmonic generation (HHG) in gases has been the main enabling technology of attosecond science since its discovery. Recently, HHG from solids has been demonstrated, opening a lively area of research. In contrast, harmonic generation from liquids has so far remained restricted to low harmonics in the visible regim...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-06040-4

    authors: Luu TT,Yin Z,Jain A,Gaumnitz T,Pertot Y,Ma J,Wörner HJ

    更新日期:2018-09-13 00:00:00

  • The role of artificial intelligence in achieving the Sustainable Development Goals.

    abstract::The emergence of artificial intelligence (AI) and its progressively wider impact on many sectors requires an assessment of its effect on the achievement of the Sustainable Development Goals. Using a consensus-based expert elicitation process, we find that AI can enable the accomplishment of 134 targets across all the ...

    journal_title:Nature communications

    pub_type: 杂志文章,评审

    doi:10.1038/s41467-019-14108-y

    authors: Vinuesa R,Azizpour H,Leite I,Balaam M,Dignum V,Domisch S,Felländer A,Langhans SD,Tegmark M,Fuso Nerini F

    更新日期:2020-01-13 00:00:00

  • Causal associations between risk factors and common diseases inferred from GWAS summary data.

    abstract::Health risk factors such as body mass index (BMI) and serum cholesterol are associated with many common diseases. It often remains unclear whether the risk factors are cause or consequence of disease, or whether the associations are the result of confounding. We develop and apply a method (called GSMR) that performs a...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-017-02317-2

    authors: Zhu Z,Zheng Z,Zhang F,Wu Y,Trzaskowski M,Maier R,Robinson MR,McGrath JJ,Visscher PM,Wray NR,Yang J

    更新日期:2018-01-15 00:00:00

  • Spatially inhomogeneous competition between superconductivity and the charge density wave in YBa2Cu3O6.67.

    abstract::The charge density wave in the high-temperature superconductor YBa2Cu3O7-x (YBCO) has two different ordering tendencies differentiated by their c-axis correlations. These correspond to ferro- (F-CDW) and antiferro- (AF-CDW) couplings between CDWs in neighbouring CuO2 bilayers. This discovery has prompted several funda...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-14536-1

    authors: Choi J,Ivashko O,Blackburn E,Liang R,Bonn DA,Hardy WN,Holmes AT,Christensen NB,Hücker M,Gerber S,Gutowski O,Rütt U,Zimmermann MV,Forgan EM,Hayden SM,Chang J

    更新日期:2020-02-20 00:00:00

  • Dual RNA-seq of Orientia tsutsugamushi informs on host-pathogen interactions for this neglected intracellular human pathogen.

    abstract::Studying emerging or neglected pathogens is often challenging due to insufficient information and absence of genetic tools. Dual RNA-seq provides insights into host-pathogen interactions, and is particularly informative for intracellular organisms. Here we apply dual RNA-seq to Orientia tsutsugamushi (Ot), an obligate...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-17094-8

    authors: Mika-Gospodorz B,Giengkam S,Westermann AJ,Wongsantichon J,Kion-Crosby W,Chuenklin S,Wang LC,Sunyakumthorn P,Sobota RM,Subbian S,Vogel J,Barquist L,Salje J

    更新日期:2020-07-03 00:00:00

  • A plasma-treated chalcogenide switch device for stackable scalable 3D nanoscale memory.

    abstract::Stackable select devices such as the oxide p-n junction diode and the Schottky diode (one-way switch) have been proposed for non-volatile unipolar resistive switching devices; however, bidirectional select devices (or two-way switch) need to be developed for bipolar resistive switching devices. Here we report on a ful...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms3629

    authors: Lee MJ,Lee D,Cho SH,Hur JH,Lee SM,Seo DH,Kim DS,Yang MS,Lee S,Hwang E,Uddin MR,Kim H,Chung UI,Park Y,Yoo IK

    更新日期:2013-01-01 00:00:00

  • Tolerance induction to human stem cell transplants with extension to their differentiated progeny.

    abstract::There is increasing interest in transplantation of human stem cells for therapeutic purposes. It would benefit future application if one could achieve their long-term acceptance and functional differentiation in allogeneic hosts using minimal immunosuppression. Allogeneic stem cell transplants differ from conventional...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms6629

    authors: Lui KO,Howie D,Ng SW,Liu S,Chien KR,Waldmann H

    更新日期:2014-12-01 00:00:00

  • Fermi-arc supercurrent oscillations in Dirac semimetal Josephson junctions.

    abstract::One prominent hallmark of topological semimetals is the existence of unusual topological surface states known as Fermi arcs. Nevertheless, the Fermi-arc superconductivity remains elusive. Here, we report the critical current oscillations from surface Fermi arcs in Nb-Dirac semimetal Cd3As2-Nb Josephson junctions. The ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-15010-8

    authors: Li CZ,Wang AQ,Li C,Zheng WZ,Brinkman A,Yu DP,Liao ZM

    更新日期:2020-03-02 00:00:00

  • Molecular switches from benzene derivatives adsorbed on metal surfaces.

    abstract::Transient precursor states are often experimentally observed for molecules adsorbing on surfaces. However, such precursor states are typically rather short-lived, quickly yielding to more stable adsorption configurations. Here we employ first-principles calculations to systematically explore the interaction mechanism ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms3569

    authors: Liu W,Filimonov SN,Carrasco J,Tkatchenko A

    更新日期:2013-01-01 00:00:00

  • Autophagy lipidation machinery regulates axonal microtubule dynamics but is dispensable for survival of mammalian neurons.

    abstract::Neurons maintain axonal homeostasis via employing a unique organization of the microtubule (MT) cytoskeleton, which supports axonal morphology and provides tracks for intracellular transport. Abnormal MT-based trafficking hallmarks the pathology of neurodegenerative diseases, but the exact mechanism regulating MT dyna...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-15287-9

    authors: Negrete-Hurtado A,Overhoff M,Bera S,De Bruyckere E,Schätzmüller K,Kye MJ,Qin C,Lammers M,Kondylis V,Neundorf I,Kononenko NL

    更新日期:2020-03-24 00:00:00

  • Laminin regulates PDGFRβ(+) cell stemness and muscle development.

    abstract::Muscle-resident PDGFRβ(+) cells, which include pericytes and PW1(+) interstitial cells (PICs), play a dual role in muscular dystrophy. They can either undergo myogenesis to promote muscle regeneration or differentiate into adipocytes and other cells to compromise regeneration. How the differentiation and fate determin...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms11415

    authors: Yao Y,Norris EH,Mason CE,Strickland S

    更新日期:2016-05-03 00:00:00

  • Three-dimensional structural dynamics of DNA origami Bennett linkages using individual-particle electron tomography.

    abstract::Scaffolded DNA origami has proven to be a powerful and efficient technique to fabricate functional nanomachines by programming the folding of a single-stranded DNA template strand into three-dimensional (3D) nanostructures, designed to be precisely motion-controlled. Although two-dimensional (2D) imaging of DNA nanoma...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-03018-0

    authors: Lei D,Marras AE,Liu J,Huang CM,Zhou L,Castro CE,Su HJ,Ren G

    更新日期:2018-02-09 00:00:00

  • An atlas of DNA methylomes in porcine adipose and muscle tissues.

    abstract::It is evident that epigenetic factors, especially DNA methylation, have essential roles in obesity development. Here, using pig as a model, we investigate the systematic association between DNA methylation and obesity. We sample eight variant adipose and two distinct ske...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms1854

    authors: Li M,Wu H,Luo Z,Xia Y,Guan J,Wang T,Gu Y,Chen L,Zhang K,Ma J,Liu Y,Zhong Z,Nie J,Zhou S,Mu Z,Wang X,Qu J,Jing L,Wang H,Huang S,Yi N,Wang Z,Xi D,Wang J,Yin G,Wang L,Li N,Jiang Z,Lang Q,Xiao H,Ji

    更新日期:2012-05-22 00:00:00

  • Inactivating mutations and X-ray crystal structure of the tumor suppressor OPCML reveal cancer-associated functions.

    abstract::OPCML, a tumor suppressor gene, is frequently silenced epigenetically in ovarian and other cancers. Here we report, by analysis of databases of tumor sequences, the observation of OPCML somatic missense mutations from various tumor types and the impact of these mutations on OPCML function, by solving the X-ray crystal...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-10966-8

    authors: Birtley JR,Alomary M,Zanini E,Antony J,Maben Z,Weaver GC,Von Arx C,Mura M,Marinho AT,Lu H,Morecroft EVN,Karali E,Chayen NE,Tate EW,Jurewicz M,Stern LJ,Recchi C,Gabra H

    更新日期:2019-07-17 00:00:00

  • Probing biomechanical properties with a centrifugal force quartz crystal microbalance.

    abstract::Application of force on biomolecules has been instrumental in understanding biofunctional behaviour from single molecules to complex collections of cells. Current approaches, for example, those based on atomic force microscopy or magnetic or optical tweezers, are powerful but limited in their applicability as integrat...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms6284

    authors: Webster A,Vollmer F,Sato Y

    更新日期:2014-10-21 00:00:00

  • Dynamic urea bond for the design of reversible and self-healing polymers.

    abstract::Polymers bearing dynamic covalent bonds may exhibit dynamic properties, such as self-healing, shape memory and environmental adaptation. However, most dynamic covalent chemistries developed so far require either catalyst or change of environmental conditions to facilitate bond reversion and dynamic property change in ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms4218

    authors: Ying H,Zhang Y,Cheng J

    更新日期:2014-01-01 00:00:00

  • Ultra-high on-chip optical gain in erbium-based hybrid slot waveguides.

    abstract::Efficient and reliable on-chip optical amplifiers and light sources would enable versatile integration of various active functionalities on the silicon platform. Although lasing on silicon has been demonstrated with semiconductors by using methods such as wafer bonding or molecular beam epitaxy, cost-effective mass pr...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-08369-w

    authors: Rönn J,Zhang W,Autere A,Leroux X,Pakarinen L,Alonso-Ramos C,Säynätjoki A,Lipsanen H,Vivien L,Cassan E,Sun Z

    更新日期:2019-01-25 00:00:00

  • Glutamine metabolism regulates autophagy-dependent mTORC1 reactivation during amino acid starvation.

    abstract::Activation of autophagy and elevation of glutamine synthesis represent key adaptations to maintain amino acid balance during starvation. In this study, we investigate the role of autophagy and glutamine on the regulation of mTORC1, a critical kinase that regulates cell growth and proliferation. We report that suppleme...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-017-00369-y

    authors: Tan HWS,Sim AYL,Long YC

    更新日期:2017-08-24 00:00:00

  • Dynamic patterns of information flow in complex networks.

    abstract::Although networks are extensively used to visualize information flow in biological, social and technological systems, translating topology into dynamic flow continues to challenge us, as similar networks exhibit fundamentally different flow patterns, driven by different interaction mechanisms. To uncover a network's a...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-017-01916-3

    authors: Harush U,Barzel B

    更新日期:2017-12-19 00:00:00

  • Phototaxis of synthetic microswimmers in optical landscapes.

    abstract::Many microorganisms, with phytoplankton and zooplankton as prominent examples, display phototactic behaviour, that is, the ability to perform directed motion within a light gradient. Here we experimentally demonstrate that sensing of light gradients can also be achieved in a system of synthetic photo-activated micropa...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms12828

    authors: Lozano C,Ten Hagen B,Löwen H,Bechinger C

    更新日期:2016-09-30 00:00:00

  • Plasmodium falciparum heat shock protein 110 stabilizes the asparagine repeat-rich parasite proteome during malarial fevers.

    abstract::One-fourth of Plasmodium falciparum proteins have asparagine repeats that increase the propensity for aggregation, especially at elevated temperatures that occur routinely in malaria-infected patients. Here we report that a Plasmodium Asn repeat-containing protein (PFI1155w) formed aggregates in mammalian cells at feb...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms2306

    authors: Muralidharan V,Oksman A,Pal P,Lindquist S,Goldberg DE

    更新日期:2012-01-01 00:00:00

  • The evolutionary origin of human hyper-cooperation.

    abstract::Proactive, that is, unsolicited, prosociality is a key component of our hyper-cooperation, which in turn has enabled the emergence of various uniquely human traits, including complex cognition, morality and cumulative culture and technology. However, the evolutionary foundation of the human prosocial sentiment remains...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms5747

    authors: Burkart JM,Allon O,Amici F,Fichtel C,Finkenwirth C,Heschl A,Huber J,Isler K,Kosonen ZK,Martins E,Meulman EJ,Richiger R,Rueth K,Spillmann B,Wiesendanger S,van Schaik CP

    更新日期:2014-08-27 00:00:00

  • Clonal dynamics following p53 loss of heterozygosity in Kras-driven cancers.

    abstract::Although it has become increasingly clear that cancers display extensive cellular heterogeneity, the spatial growth dynamics of genetically distinct clones within developing solid tumours remain poorly understood. Here we leverage mosaic analysis with double markers (MADM) to trace subclonal populations retaining or l...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms12685

    authors: Muzumdar MD,Dorans KJ,Chung KM,Robbins R,Tammela T,Gocheva V,Li CM,Jacks T

    更新日期:2016-09-02 00:00:00

  • Addendum: A very large-scale microelectrode array for cellular-resolution electrophysiology.

    abstract:: ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-06969-6

    authors: Tsai D,Sawyer D,Bradd A,Yuste R,Shepard KL

    更新日期:2018-10-24 00:00:00

  • High-pressure synthesis of a polyethylene/zeolite nano-composite material.

    abstract::Meso/micro-porous solids, such as zeolites, are complex materials used in an impressive range of applications. Here we photo-polymerized ethylene using non-catalytic high-pressure techniques at 0.5-1.5 GPa under ultraviolet (351-364 nm) irradiation on a sub-nanometre scale in the channels of a pure SiO2 zeolite, silic...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms2564

    authors: Santoro M,Gorelli FA,Bini R,Haines J,van der Lee A

    更新日期:2013-01-01 00:00:00