Genetic analysis of three porcine bocaparvoviruses and identification of a natural recombinant breakpoint in NS1.

Abstract:

:In this study, we obtained the whole genomes of three porcine bocaparvovirus (PBoV) strains (GD6, GD10, and GD23) by polymerase chain reaction. Sequence analysis showed that all three field strains belonged to PBoV group 3 (G3). The phylogenetic trees based on NS1, NP1, and VP1 differed to the extent that these PBoVs were potentially more closely related to bocaparvoviruses known to infect other animals than to other PBoVs. GD6, GD10, and GD23 all included the conserved sequences YLGPF and HDXXY, with known phospholipase A2 activity. Using recombination-detection software we identified a natural recombinant breakpoint in the NS1 region of PBoV G3. The results of this study will further the epidemiological characterization of PBoVs.

journal_name

Arch Virol

journal_title

Archives of virology

authors

Zhou Y,Xu J,Zhu SK,Meng QF,Lin ZX,Chen R,Qian AD

doi

10.1007/s00705-017-3606-8

subject

Has Abstract

pub_date

2018-03-01 00:00:00

pages

707-712

issue

3

eissn

0304-8608

issn

1432-8798

pii

10.1007/s00705-017-3606-8

journal_volume

163

pub_type

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