当前位置： SCI文献检索 > ARCHIVES OF VIROLOGY期刊下所有文献 > Influenza A virus drift variants reduced the detection sensitivity of a commercial multiplex nucleic acid amplification assay in the season 2014/15.

Influenza A virus drift variants reduced the detection sensitivity of a commercial multiplex nucleic acid amplification assay in the season 2014/15.

Abstract：

:The influenza season 2014/15 was dominated by drift variants of influenza A(H3N2), which resulted in a reduced vaccine effectiveness. It was not clear if the performance of commercial nucleic-acid-based amplification (NAT) assays for the detection of influenza was affected. The purpose of this study was to perform a real-life evaluation of two commercial NAT assays. During January-April 2015, we tested a total of 665 samples from patients with influenza-like illness using the Fast Track Diagnostics Respiratory pathogens 21, a commercial multiplex kit, (cohorts 1 and 2, n = 563 patients) and the Xpert Flu/RSV XC assay (cohort 3, n = 102 patients), a single-use cartridge system. An in-house influenza real-time RT-PCR (cohort 1) and the RealStar Influenza RT-PCR 1.0 Kit (cohort 2 and 3) served as reference tests. Compared to the reference assay, an overall agreement of 95.9 % (cohort 1), 95 % (cohort 2), and 98 % (cohort 3) was achieved. A total of 24 false-negative results were observed using the Fast Track Diagnostics Respiratory pathogens 21 kit. No false-negative results occurred using the Xpert Flu/RSV XC assay. The Fast Track Diagnostics Respiratory pathogens 21 kit and the Xpert Flu/RSV XC assay had sensitivities of 90.7 % and 100 % and specificities of 100 % and 94.1 %, respectively, compared to the RealStar 1.0 kit. Upon modification of the Fast Track Diagnostics Respiratory pathogens 21 kit, the sensitivity increased to 97.3 %. Influenza virus strains circulating during the 2014/15 season reduced the detection sensitivity of a commercial NAT assay, and continuous monitoring of test performance is therefore necessary.

journal_name

Arch Virol

journal_title

Archives of virology

authors

Huzly D,Korn K,Bierbaum S,Eberle B,Falcone V,Knöll A,Steininger P,Panning M

doi

10.1007/s00705-016-2930-8

subject

Has Abstract

pub_date

2016-09-01 00:00:00

pages

2417-23

issue

9

eissn

0304-8608

issn

1432-8798

pii

10.1007/s00705-016-2930-8

journal_volume

161

pub_type

杂志文章

相关文献

ARCHIVES OF VIROLOGY文献大全
  • Development of a multiplex real-time RT-PCR assay for simultaneous detection of dengue and chikungunya viruses.

    abstract：:Dengue and chikungunya viruses co-circulate and cause infections that start with similar symptoms but progress to radically different outcomes. Therefore, an early diagnostic test that can differentiate between the two is needed. A single-step multiplex real-time RT-PCR assay was developed that can simultaneously dete...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-014-2217-x

    authors： Cecilia D,Kakade M,Alagarasu K,Patil J,Salunke A,Parashar D,Shah PS

    更新日期：2015-01-01 00:00:00

  • Molecular epidemiology of TTV-like mini virus in Norway.

    abstract：:TT virus (TTV), the first human circovirus to be discovered, appears to be present in most people; less is known about the prevalence of the related TTV-like mini virus (TLMV). A sensitive nested PCR, specific for TLMV, detected the virus in 48% of 201 sera (Norwegian blood donors) previously found to have a 90% preva...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s705-002-8310-6

    authors： Moen EM,Huang L,Grinde B

    更新日期：2002-01-01 00:00:00

  • Genetic structure and molecular variability of potato virus M populations.

    abstract：:To investigate the genetic diversity of potato virus M (PVM; genus Carlavirus, family Betaflexiviridae), the complete nucleotide sequence of the coat protein gene of 30 PVM isolates from a major potato-growing region in Iran were determined. Phylogenetic analysis of these Iranian PVM isolates together with those avail...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-014-2037-z

    authors： Tabasinejad F,Jafarpour B,Zakiaghl M,Siampour M,Rouhani H,Mehrvar M

    更新日期：2014-08-01 00:00:00

  • A virus related to soybean mosaic virus from Pinellia ternata in China and its comparison with local soybean SMV isolates.

    abstract：:A potyvirus isolated from Pinellia ternata in China was characterised and shown to be related to Soybean mosaic virus (SMV). The virus was pathogenic on P. ternata and some soybean cultivars, whereas the local soybean SMV isolate HH5 did not infect P. ternata. Western blot experiments demonstrated a serological relati...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-003-0184-8

    authors： Chen J,Zheng HY,Lin L,Adams MJ,Antoniw JF,Zhao MF,Shang YF,Chen JP

    更新日期：2004-02-01 00:00:00

  • Phosphatidylinositol-3-kinase-Akt pathway in negative-stranded RNA virus infection: a minireview.

    abstract：:The PI3K/Akt signalling pathway is a crucial signalling cascade that regulates transcription, protein translation, cell growth, proliferation, cell survival, and metabolism. During viral infection, viruses exploit a variety of cellular pathways, including the well-known PI3K/Akt signalling pathway. Conversely, cells r...

    journal_title：Archives of virology

    pub_type： 杂志文章,评审

    doi：10.1007/s00705-020-04740-1

    authors： Blanco J,Cameirao C,López MC,Muñoz-Barroso I

    更新日期：2020-10-01 00:00:00

  • T cell subset profile and inflammatory cytokine properties in the gut-associated lymphoid tissues of chickens during infectious bursal disease virus (IBDV) infection.

    abstract：:While infectious bursal disease virus (IBDV) mainly targets immature B cells and causes T cell infiltration in the bursa of Fabricius (BF) of chickens, the effect of IBDV infection on the properties of T cells and relevant cytokine production in avian gut-associated lymphoid tissues (GALTs) remains unknown. Here, we s...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-020-04735-y

    authors： Ruan Y,Wang Y,Guo Y,Xiong Y,Chen M,Zhao A,Liu H

    更新日期：2020-10-01 00:00:00

  • Expression, cellular localization and antibody responses of the African swine fever virus genes B602L and K205R.

    abstract：:Previously, we identified serological immunodeterminants of African swine fever virus (ASFV), including pK205R and pB602L, without homologues in the database. pK205R is expressed as a 33-kD protein from 4 h post-infection onward, initially diffusely distributed throughout cells, and subsequently in viral factories. pK...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-008-0246-z

    authors： Gutiérrez-Castañeda B,Reis AL,Corteyn A,Parkhouse RM,Kollnberger S

    更新日期：2008-01-01 00:00:00

  • Inhibition of the PI3K/Akt pathway by Ly294002 does not prevent establishment of persistent Junín virus infection in Vero cells.

    abstract：:In previous work, we demonstrated that the arenavirus Junín virus (JUNV) is able to activate Akt by means of the phosphatidylinositol-3-kinase (PI3K) survival pathway during virus entry. This work extends our study, emphasizing the relevance of this pathway in the establishment and maintenance of persistent infection ...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-014-2298-6

    authors： Linero FN,Fernández Bell-Fano PM,Cuervo E,Castilla V,Scolaro LA

    更新日期：2015-02-01 00:00:00

  • Sequence variation in two genes determines the efficacy of transmission of citrus tristeza virus by the brown citrus aphid.

    abstract：:Vector transmission is an important part of the viral infection cycle, yet for many viruses little is known about this process, or how viral sequence variation affects transmission efficacy. Here we examined the effect of substituting genes from the highly transmissible FS577 isolate of citrus tristeza virus (CTV) in ...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-016-3070-x

    authors： Harper SJ,Killiny N,Tatineni S,Gowda S,Cowell SJ,Shilts T,Dawson WO

    更新日期：2016-12-01 00:00:00

  • Molecular cloning and physical mapping of bovine herpesvirus 4 strain DN 599 and comparison with two American field-isolates.

    abstract：:Ninety four percent of the genome of bovine herpesvirus 4 (BHV-4) strain DN 599 was cloned and a physical map was constructed by Southern blot analysis using a library of cloned fragments cleaved with the 3 restriction enzymes (Eco RI, Bam HI, and Hin dIII). The genome length was estimated to be 156.5 kbp +/- 0.7. The...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01309576

    authors： Shen DT,Burger D,Tong GZ,Gorham JR

    更新日期：1992-01-01 00:00:00

  • Effect of DEAE-dextran on protein synthesis in HeLa cells.

    abstract：:Concentrations of DEAE-dextran which are currently used to stimulate the interaction between animal cells and natural or synthetic polynucleotides, inhibit protein synthesis in HeLa cells. This inhibition results from the blocking of more than one of the steps in protein synthesis, including transport of amino acids. ...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF02175599

    authors： Saborio JL,Wiegers KJ,Koch G

    更新日期：1975-01-01 00:00:00

  • Induction of humoral and cellular immune responses against hepatitis C virus by vaccination with replicon particles derived from Sindbis-like virus XJ-160.

    abstract：:A replication-defective, recombinant Sindbis virus vector was utilized in a novel immunization strategy to induce humoral and cellular responses against hepatitis C virus (HCV). The recombinant vector, pVaXJ-E1E2, expressing the gene for HCV glycoproteins E2 and E1, was constructed by inserting the E1E2 gene into the ...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-012-1564-8

    authors： Zhu W,Fu J,Lu J,Deng Y,Wang H,Wei Y,Deng L,Tan W,Liang G

    更新日期：2013-05-01 00:00:00

  • A betabaculovirus DNA polymerase cannot substitute for the DNA polymerase of the alphabaculovirus Autographa californica nucleopolyhedrovirus.

    abstract：:DNA polymerase (DNApol) is present in all baculoviruses and plays a crucial role in viral DNA replication. Previously we showed that the DNApol of the alphabaculovirus group II Spodoptera litura nucleopolyhedrovirus (SpltNPV) could partially substitute for the DNApol of a group I alphabaculovirus, Autographa californi...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-017-3468-0

    authors： Chen G,Fang Y,Wu L,Yan Q,Krell PJ,Feng G

    更新日期：2017-11-01 00:00:00

  • Host cell proteins binding to the encapsidation signal epsilon in hepatitis B virus RNA.

    abstract：:The highly conserved encapsidation signal (epsilon) of hepatitis B viral (HBV) pregenomic RNA has been reported as an essential component for encapsidation and protein priming of HBV polymerase. Here, we report that two HBV epsilon RNA-binding host proteins (80 and 43 kDa) and a copurifying protein (100 kDa) were puri...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s007050200001

    authors： Shin HJ,Kim SS,Cho YH,Lee SG,Rho HM

    更新日期：2002-03-01 00:00:00

  • Preparation and characterization of a neutralizing monoclonal antibody directed to VP4 of rotavirus strain K8 which has unique VP4 neutralization epitopes.

    abstract：:For selecting the neutralizing monoclonal antibodies (N-MAbs) directed to VP4 of rotavirus strain K8, which has unique VP4 neutralization epitopes, we prepared several reassortant viruses by mixed infection of two different strains K8 (serotype 1) and P (serotype 3) in vitro: three reassortant clones having VP4 of K8 ...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01316751

    authors： Kobayashi N,Taniguchi K,Urasawa T,Urasawa S

    更新日期：1991-01-01 00:00:00

  • Analysis of the TK enzyme complex induced by HSV types 1 and 2 by means of isoelectric focusing and polyacrylamide gel electrophoresis.

    abstract：:Recently we have described that the Herpes simplex virus (HSV)-induced thymidine kinase (TK) induces AMP- and ADP-dThd-5'-phosphotransferase activities. We now demonstrate the heterogeneity of the described activities in isoelectric focusing experiments and polyacrylamide gel electrophoresis. A TK--mutant of HSV type ...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01314875

    authors： Labenz J,Friedrich D,Falke D

    更新日期：1982-01-01 00:00:00

  • Poliovirus modulates Bcl-xl expression in the human U937 promonocytic cell line.

    abstract：:Poliovirus induces bcl-2-independent apoptosis in the human U937 promonocytic cell line [28]. Here we describe that this cell death, induced after viral infection, correlates with the modulation of the protooncoprotein Bcl-xl. Furthermore, poliovirus infection decreases the detected Bcl-xl in a U937 clone that overexp...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-002-0881-8

    authors： Calandria C,López-Guerrero JA

    更新日期：2002-12-01 00:00:00

  • O/SEA/Mya-98 lineage foot-and-mouth disease virus was responsible for an extensive epidemic that occurred in late 2018 in Vietnam.

    abstract：:Since late 2018, foot-and-mouth disease (FMD) has reemerged and rapidly swept through pig farms in North and Central Vietnam, despite widespread use of commercial FMD vaccines. To investigate the FMD virus (FMDV) strains responsible for the current epidemics, 40 FMDV samples were collected from 17 provinces during Nov...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-020-04763-8

    authors： Van Diep N,Ngoc TTB,Hoa LQ,Nga BTT,Kang B,Oh J,Lan NT,Le VP

    更新日期：2020-11-01 00:00:00

  • A comparison of six cypovirus isolates by cross-hybridisation of their dsRNA genome segments.

    abstract：:Genetic relationships between the genome segments of six cypovirus (CPV) isolates were analysed by RNA cross-hybridisation. These included three type 1 viruses and single isolates of types 2, 5 and 12, which collectively are identical to those previously compared by serology and electrophoresis [Mertens et al. (1989),...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s007050050525

    authors： Mertens PP,Pedley S,Crook NE,Rubinstein R,Payne CC

    更新日期：1999-01-01 00:00:00

  • Complete genome sequence of an isolate of duck enteritis virus from China.

    abstract：:Here, we present the complete genomic sequence of duck enteritis virus (DEV) strain SD, isolated in China in 2012. The virus was virulent in experimentally infected 2-month-old ducks. The DEV SD genome is 160,945 base pairs (bp) in length. The viral genome sequence, when compared to that of strain DEV CSC, which was i...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-020-04594-7

    authors： Zhang B,Huang X,Yang Y,Zhang M,Song Y,Yang C

    更新日期：2020-07-01 00:00:00

  • A movement protein and three capsid proteins are all necessary for the cell-to-cell movement of apple latent spherical cheravirus.

    abstract：:Immunoblot analysis of apple latent spherical cheravirus (ALSV)-infected leaves using a polyclonal antibody against the 21 C-terminal amino acids of a 53 K/42 K movement protein (MP) showed that a protein with an Mr of 42 kDa (42KP) is the dominant form found in vivo, which could indicate that the second AUG is used a...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-005-0689-4

    authors： Yoshikawa N,Okada K,Asamuma K,Watanabe K,Igarasi A,Li C,Isogai M

    更新日期：2006-05-01 00:00:00

  • Detection and identification of avian, duck, and goose reoviruses by RT-PCR: goose and duck reoviruses are part of the same genogroup in the genus Orthoreovirus.

    abstract：:A reverse transcription-polymerase chain reaction (RT-PCR) procedure for the detection of avian, duck, and goose reovirus (ARV, DRV, and GRV) RNA from cell culture supernatant and clinical samples was established. Based on multiple sequence alignment, a pair of degenerate primers was selected and synthesized. The ampl...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-006-0731-1

    authors： Zhang Y,Liu M,Shuidong O,Hu QL,Guo DC,Chen HY,Han Z

    更新日期：2006-08-01 00:00:00

  • Profiling of cellular microRNA responses during the early stages of KSHV infection.

    abstract：:Kaposi's sarcoma-associated herpesvirus (KSHV) causes a variety of cancers, including Kaposi's sarcoma (KS), primary effusion lymphoma (PEL), and multicentric Castleman disease (MCD). Host cellular microRNAs (miRNAs) play important post-transcriptional regulatory roles in gene expression and can greatly influence viru...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-017-3478-y

    authors： Hussein HAM,Akula SM

    更新日期：2017-11-01 00:00:00

  • The enhancing effect of copper, nickel, and cobalt ions on plaque formation by Semliki Forest virus (SFV) in chicken embryo fibroblasts.

    abstract：:In cultured chicken embryo fibroblasts treated with copper-(copper cation 10-minus 3.5-10-minus 5 M), nickel and cobalt salts an enhancement of the plating efficiency of Semliki Forest virus could be observed. This augmented plaque formation was most probably due to a higher adsorption rate of virions to the cell surf...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01315593

    authors： Wyler R,Wiesendanger W

    更新日期：1975-01-01 00:00:00

  • On the origin of the gene coding for an influenze A virus nucleocapsid protein.

    abstract：:The gene coding for the nucleocapsid protein NP of the influenza A virus recombinant strain 413 1,1 was characterized biochemically by molecular hybridization and fingerprint analysis. The data presented suggest that this NP gene has evolved by intracistronic recombination between NP genes of virus N and the fowl plag...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01322701

    authors： Rohde W,Scholtissek C

    更新日期：1980-01-01 00:00:00

  • Transcriptional control of the HERV-H LTR element of the GSDML gene in human tissues and cancer cells.

    abstract：:Long terminal repeats (LTRs) of human endogenous retroviruses (HERVs) have been reported to serve as alternative promoters in functional genes. The GSDML (gasdermin-like protein) gene located on human chromosome 17q21 has been found to be an oncogenomic recombination hotspot. Here, we identified the LTR element of HER...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-006-0764-5

    authors： Sin HS,Huh JW,Kim DS,Kang DW,Min DS,Kim TH,Ha HS,Kim HH,Lee SY,Kim HS

    更新日期：2006-10-01 00:00:00

  • Transplacental infection and embryonic death following maternal exposure to porcine parvovirus near the time of conception.

    abstract：:Each of 20 gilts (principals) from a commercial swine herd free of antibody for porcine parvovirus (PPV) was exposed intranasally and orally to PPV at the onset of gestation. The gilts were killed and necropsied 22 +/- 1 days later to determine the effect of the virus on their embryos. An equal number of gilts (contro...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01340540

    authors： Mengeling WL,Paul PS,Brown TT

    更新日期：1980-01-01 00:00:00

  • Some observations on the binding properties of alfalfa mosaic virus to polystyrene and its significance to indirect ELISA.

    abstract：:The adsorption and retention properties of native (unfixed) and glutaraldehyde-fixed alfalfa mosaic virus (AMV) antigens to the polystyrene of ELISA plates were studied using [35S]-labelled virus preparations. It was shown that adsorption was a temperature-dependent, relatively slow process which varied between differ...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01310767

    authors： Hajimorad MR,Francki RI

    更新日期：1991-01-01 00:00:00

  • A multiple alignment of the capsid protein sequences of nepoviruses and comoviruses suggests a common structure.

    abstract：:The amino acid sequences of the regions encoding the structural proteins of eleven nepoviruses and five comoviruses, two genera of the family Comoviridae, have been aligned. The properties predicted by computer analysis (three-dimensional-3D-structure, hydrophobicity) are also correlated along this alignment, and alig...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01322691

    authors： Le Gall O,Candresse T,Dunez J

    更新日期：1995-01-01 00:00:00

  • The intracellular proteins induced by cricket paralysis virus in Drosophila cells: the effect of protease inhibitors and amino acid analogues.

    abstract：:Treatment of Cricket paralysis virus infected Drosophila cells with iodoacetamide before radiolabelling with 35S-methionine results in the appearance of two high molecular weight polypeptides of approximately equal to 200,000 molecular weight, not apparent in untreated infected cells (17). To attempt to differentiate ...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01320788

    authors： Moore NF,Pullin JS,Reavy B

    更新日期：1981-01-01 00:00:00