Prediction of the virological response to etravirine in clinical practice: Comparison of three genotype algorithms.

Abstract:

:The current Agence Nationale de Recherche sur le SIDA (ANRS)/International AIDS Society (IAS) algorithm predicts resistance to etravirine for viruses harboring >/=3 mutations from a list of 13 reverse transcriptase (RT) mutations. Two weighted algorithms, best correlated with fold changes to etravirine, have been described recently. A retrospective virological analysis of a major French city HIV sequences database was undertaken to assess the proportion of etravirine resistant viruses according to these three algorithms and the correlations between them. Two thousand six hundred eighty RT sequences were analyzed, including 749 from naive patients and 926 from patients previously treated with non-nucleoside reverse transcriptase inhibitor (NNRTI). Combinations of mutations associated with etravirine resistance according to the three algorithms were found in 0%, 2.3%, and 3.6% of naive patients, and in 2.4%, 20.4%, and 19.3% of patients previously treated with NNRTIs. Concordance between the algorithms was weak (2 x 2 Kendall's tau: 0.787, 0.395, and 0.584). Most of the discordance was due to the differential weights attributed to Y181C/V, L100I, and K101P in the two weighted algorithms. It is concluded that the current ANRS/ IAS algorithm probably underestimates the proportion of viruses partially resistant to etravirine in NNRTI-experienced patients. Improvements in algorithms are needed to take into account the partial resistance associated with some mutation patterns, and should include either additional mutations to the current list and/or differential weights for specific mutations. Surveys of naive patients should be conducted to estimate the risk of primary resistance to etravirine in a minority of cases.

journal_name

J Med Virol

authors

Cotte L,Trabaud MA,Tardy JC,Brochier C,Gilibert RP,Miailhes P,Trépo C,André P

doi

10.1002/jmv.21461

subject

Has Abstract

pub_date

2009-04-01 00:00:00

pages

672-7

issue

4

eissn

0146-6615

issn

1096-9071

journal_volume

81

pub_type

杂志文章
  • High prevalence of non-B HIV-1 subtypes in seamen and their sexual partners in Croatia.

    abstract::Travel influences the spread of non-B subtypes of HIV in Europe. The aim of this study was to assess whether the spread of non-B subtypes occurred in Croatia, a country with a low level HIV infection. Phylogenetic analysis of the reverse transcriptase and protease genes was undertaken in 145 Croatian patients with the...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.21433

    authors: Ramirez-Piedad MK,Lepej SZ,Yerly S,Begovac J

    更新日期:2009-04-01 00:00:00

  • Importance of endothelial dysfunction biomarkers in patients with Crimean-Congo hemorrhagic fever.

    abstract::The pathogenesis of the Crimean-Congo hemorrhagic fever (CCHF) and the cause of the hemorrhage are not yet fully understood. However, the endothelium plays a key role in the pathogenesis. The purpose of this study was to investigate endothelial dysfunction markers (asymmetrical dimethyl arginine [ADMA], endothelin 1[E...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.24881

    authors: Arslan M,Yilmaz G,Mentese A,Yilmaz H,Karahan SC,Koksal I

    更新日期:2017-12-01 00:00:00

  • A comparison of epidemiologic and immunologic features of bronchiolitis caused by influenza virus and respiratory syncytial virus.

    abstract::We studied epidemiologic and immunologic factors in infants with bronchiolitis caused by influenza virus. The proportion of these infants who were male and who had an immediate family member with a history of asthma was similar to that of a control group of infants with respiratory syncytial virus (RSV) bronchiolitis....

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.20268

    authors: Garofalo RP,Hintz KH,Hill V,Patti J,Ogra PL,Welliver RC Sr

    更新日期:2005-02-01 00:00:00

  • Low prevalence of IgG antibodies against antigens of HEV genotypes 1 and 3 in women with a high-risk pregnancy.

    abstract::The aim of the study was to assess whether high-risk pregnant women have a higher prevalence of HEV during the perinatal period. This was a cross-sectional study of 428 patients: Group 1, 127 women with a high-risk pregnancy; Group 2, 97 asymptomatic people with reactivity to HCV or HBV; Group 3, 94 patients with clin...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.24878

    authors: Baptista-González H,Trueba-Gómez R,Rosenfeld-Mann F,Roque-Álvarez E,Méndez-Sánchez N

    更新日期:2017-11-01 00:00:00

  • Surveillance of measles in the Sudan using filter paper blood samples.

    abstract::Dried blood spots collected on filter paper are considered potential clinical specimens for measles surveillance because of their ease of collection, storage, and transport. The usefulness of these samples for surveillance of measles was evaluated in a field setting. Blood spots were collected by finger-prick from 316...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.20136

    authors: El Mubarak HS,Yüksel S,Mustafa OM,Ibrahim SA,Osterhaus AD,de Swart RL

    更新日期:2004-08-01 00:00:00

  • Trends in HIV prevalence among drug-users attending public drug-treatment centres in Italy: 1990-2000.

    abstract::The occurrence of HIV infection among drug-users in Italy between 1990 and 2000 is described; the data concern drug-users attending a nation-wide network consisting of 510 public drug-treatment centres. We included only individuals with written documentation of an HIV-test result. Of the 1,299,972 attendees, 54.5% had...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.20054

    authors: Suligoi B,Magliochetti N,Nicoletti G,Pezzotti P,Rezza G

    更新日期:2004-05-01 00:00:00

  • Study of influenza C virus infection in France.

    abstract::From November 2004 to April 2007, specimens were obtained from 2,281 patients with acute respiratory tract illness in Normandy, France. Eighteen strains of influenza C virus were detected in these samples using a combined tissue culture/RT-PCR diagnostic method. Most patients with influenza C virus infection (13/18) w...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.21218

    authors: Gouarin S,Vabret A,Dina J,Petitjean J,Brouard J,Cuvillon-Nimal D,Freymuth F

    更新日期:2008-08-01 00:00:00

  • The possible role of CCR5Δ32 mutation in Crimean-Congo hemorrhagic fever infection.

    abstract::Crimean-Congo hemorrhagic fever infection (CCHF) is a viral zoonosis. The pathogenesis of this disease has not been established so far, however, cytokines account for its progression and outcome. The aim of the present study is to investigate the association between chemokine receptor 5 (CCR5) gene Δ32 mutation and pa...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.24865

    authors: Rustemoglu A,Ekinci D,Nursal AF,Barut S,Duygu F,Günal Ö

    更新日期:2017-10-01 00:00:00

  • Epidemiology and clinical features of rotavirus, adenovirus, and astrovirus infections and coinfections in children with acute gastroenteritis prior to rotavirus vaccine introduction in Meerut, North India.

    abstract::There are limited reports on the etiology of multiple enteric viruses causing acute gastroenteritis (AGE) in North India. In the present study we have determined the prevalence of three enteric viruses, namely rotavirus, astrovirus (AstV) and adenovirus (AdV) in a total of 312 diarrheic children (<5 years) hospitalize...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.25645

    authors: Akdag AI,Gupta S,Khan N,Upadhayay A,Ray P

    更新日期:2020-08-01 00:00:00

  • Longitudinal analysis of frequency and reactivity of Epstein-Barr virus-specific T lymphocytes and their association with intermittent viral reactivation.

    abstract::Persistent Epstein-Barr virus (EBV) infection is controlled tightly by virus-specific T cells. EBV infection is reactivated intermittently over time, even in apparently healthy carriers. Changes in frequency and reactivity of memory T cells, particularly of CD8(+) origin, have not been assessed in this context. It is ...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.22258

    authors: Vogl BA,Fagin U,Nerbas L,Schlenke P,Lamprecht P,Jabs WJ

    更新日期:2012-01-01 00:00:00

  • Antibodies to single stranded DNA: a diagnostic aid in chronic hepatitis B virus infections.

    abstract::Serial determinations of titers of binding antibodies to single stranded DNA were performed over a period of three years in 43 type B hepatitis patients with persisting HBsAg who had either developed chronic hepatitis or were asymptomatic carriers. Patients with histopathological diagnosis of chronic active or chronic...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.1890040204

    authors: Villarejos VM,Serra J,Visoná KA,Eduarte CE

    更新日期:1979-01-01 00:00:00

  • Evaluation of LIAISON® XL system for HBsAg, and anti-HCV and anti-HIV/Ag p24.

    abstract::The aim of this study was to compare the data obtained using the new LIAISON® XL chemiluminescence system to search for HBsAg, anti-HCV, and anti-HIV1-2/p24 Ag with those obtained using the VITROS system currently adopted by the Microbiology Unit of the Hospital of Legnano. Routine samples of patients who were referre...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.24648

    authors: De Paschale M,Manco MT,Belvisi L,Cagnin D,Cerulli T,Paganini A,Arpino O,Cianflone A,Agrappi C,Mirri P,Clerici P

    更新日期:2017-03-01 00:00:00

  • Detection of occult hepatitis C virus among healthy spouses of patients with HCV infection.

    abstract::The criterion standard for the diagnosis of occult hepatitis C virus (HCV) infection is detection of HCV-RNA in liver cells. However, because of the invasive nature of liver biopsy, other methods have been studied. The present study aimed to identify subjects with occult HCV-4 infection among healthy sexual partners o...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.24074

    authors: El Shazly Y,Hemida K,Rafik M,Al Swaff R,Ali-Eldin ZA,GadAllah S

    更新日期:2015-03-01 00:00:00

  • Regulation of lymphocyte proliferation after influenza virus infection of human mononuclear leukocytes.

    abstract::Previous studies demonstrated that in vitro infection with influenza A viruses altered several functions of human monocytes-macrophages but did not detectably alter functions of human lymphocytes. However, both types of cells were infected, as determined by production and surface expression of viral antigens. In the c...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.1890270302

    authors: Roberts NJ Jr,Nichols JE

    更新日期:1989-03-01 00:00:00

  • Human herpesvirus-6 modulates RANTES production in primary human endothelial cell cultures.

    abstract::Human herpesvirus 6 (HHV6) is a beta-herpesvirus capable of infecting several cell types from different origins. HHV6 is the etiological agent of exantem subitum and has been associated with several diseases, all characterized by an inflammatory response triggered by chemokines. We show that strain U1102 of HHV6 is ab...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.10416

    authors: Caruso A,Favilli F,Rotola A,Comar M,Horejsh D,Alessandri G,Grassi M,Di Luca D,Fiorentini S

    更新日期:2003-07-01 00:00:00

  • Evolution rate of hepatitis delta virus RNA isolated in Taiwan.

    abstract::The complete RNA sequences of hepatitis delta viruses (HDV) isolated at 3 years apart from a chronic delta hepatitis patient in Taiwan were determined. The sequence analysis showed an overall evolution rate of 3.18 x 10(-3) substitutions/nucleotide/year. The evolution rates in different parts of HDV RNA varied. The hy...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.1890430414

    authors: Chao YC,Tang HS,Hsu CT

    更新日期:1994-08-01 00:00:00

  • Prevalence and genetic diversity of norovirus among patients with acute diarrhea in Guatemala.

    abstract::Noroviruses (NoVs) are a leading cause of acute gastroenteritis outbreaks and sporadic cases of diarrhea in industrialized countries. To study the prevalence and genetic diversity of NoVs in Guatemala, stool specimens were collected from hospitalized and ambulatory patients presenting with diarrhea (≥3 loose or liquid...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.23578

    authors: Estévez A,Arvelo W,Hall AJ,López MR,López B,Reyes L,Moir JC,Gregoricus N,Vinjé J,Parashar UD,Lindblade KA

    更新日期:2013-07-01 00:00:00

  • High prevalence of clinically unsuspected dengue disease among children in Ribeirao Preto city, Brazil.

    abstract::The aim of this study was to analyze the characteristics of Dengue virus (DENV)-infected children and the accuracy of dengue diagnosis based on clinical presentations. The inclusion criteria were children ≥1-year-old presenting febrile illness with 1-7 days of onset. Children (n = 110) aged 2-15 years were included in...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.24533

    authors: Poloni TR,Dornas FP,Dos Santos NN Jr,Soares AM,Amarilla AA,Alfonso HL,Trigueiro S,Lavrador MA,Yamamoto AY,Aquino VH

    更新日期:2016-10-01 00:00:00

  • Genetic analysis of HAV strains isolated from patients with acute hepatitis in Korea, 2005-2006.

    abstract::Hepatitis A virus (HAV) is a causative agent of acute viral hepatitis, which represents a significant public health problem. HAV is usually transmitted by oral-fecal route and prevalent not only in developing countries but also in developed countries worldwide. To characterize the HAV wild type strains circulating in ...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.21127

    authors: Yun H,Kim S,Lee H,Byun KS,Kwon SY,Yim HJ,Lim YS,Jeong SH,Jee Y

    更新日期:2008-05-01 00:00:00

  • Prevalence of CMV antibodies among women of childbearing age in different social environments in southern Israel.

    abstract::The prevalence rate of IgG antibodies to cytomegalovirus (CMV) was determined in a sample of 567 women of childbearing age in the southern part of Israel by the immunoperoxidase assay to membrane antigen (IPAMA) technique. Urban Jewish women of Afro-Asian origin showed significantly higher rates of seropositivity than...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.1890240104

    authors: Urkin J,Sarov B,Naggan L,Haikin H,Sarov I

    更新日期:1988-01-01 00:00:00

  • Severe metapneumovirus infections among immunocompetent and immunocompromised patients admitted to hospital with respiratory infection.

    abstract::Human metapneumovirus (hMPV) is considered an important cause of acute respiratory infections. hMPV can cause morbidity in hematopoietic stem cell transplant recipients and recent research has demonstrated that it is an important virus in patients admitted to hospital with respiratory infections and suspected of havin...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.23477

    authors: Souza JS,Watanabe A,Carraro E,Granato C,Bellei N

    更新日期:2013-03-01 00:00:00

  • Expression of matrix metalloproteinases and their inhibitors in the woodchuck model of hepatocellular carcinoma.

    abstract::Matrix metalloproteinases (MMPs) play a central role in tumor invasion and metastasis. Increased expression of MMPs occurs during development of hepatocellular carcinoma (HCC) in humans following infection with hepatitis B virus (HBV). Woodchucks are used as an animal model for hepadnavirus-induced HCC. All woodchucks...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.23571

    authors: Ochoa-Callejero L,Toshkov I,Menne S,Martínez A

    更新日期:2013-07-01 00:00:00

  • Predictors of human papilloma virus (HPV) infection in Italian women.

    abstract::HPV infection is a "necessary cause" of cervical cancer and it is sexually transmitted. Due to upcoming mass vaccination investigation on risk factors for infection is the basis to implement prophylactic strategy even in older women. The aim of the study was to evaluate predictors of high-risk (HR) HPV infection in ad...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.21887

    authors: Cercato MC,Mariani L,Vocaturo A,Carrone A,Terrenato I,Morano G,Benevolo M,Rollo F,Germelli C,Paolini F,Venuti A

    更新日期:2010-11-01 00:00:00

  • Evidence of shared Epstein-Barr viral isolates between sexual partners, and low level EBV in genital secretions.

    abstract::Epstein-Barr virus is present in the saliva of most persistently infected individuals and is generally thought to be spread by close oral contact. However, there are now several reports of EBV in genital secretions, suggesting the possibility of sexual transmission between adults. The present study was undertaken to i...

    journal_title:Journal of medical virology

    pub_type: 杂志文章,多中心研究

    doi:10.1002/jmv.20682

    authors: Thomas R,Macsween KF,McAulay K,Clutterbuck D,Anderson R,Reid S,Higgins CD,Swerdlow AJ,Harrison N,Williams H,Crawford DH

    更新日期:2006-09-01 00:00:00

  • Rotavirus prevalence and relationships with climatological factors in Gabon, Africa.

    abstract::A one-year study of rotavirus prevalence was carried out using electron microscopy in Gabon, equatorial Africa. One hundred fifty-six nonhospitalized diarrheic children up to 10 years of age and 115 age-matched controls were investigated together with diarrheic adults and children over 10 years of age. Rotaviruses wer...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.1890160210

    authors: Sitbon M,Lecerf A,Garin Y,Ivanoff B

    更新日期:1985-06-01 00:00:00

  • Global epidemiology of HIV.

    abstract::HIV is among the most generically variable of human pathogens. A comprehensive and detailed description of HIV strains in the pandemic is an important foundation for diagnosis, treatment, and prevention. The current sequence database for HIV includes almost 800 complete genome sequences, documenting HIV-1 groups M, O,...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.20599

    authors: McCutchan FE

    更新日期:2006-01-01 00:00:00

  • Cervicovaginal synthesis of IgG antibodies to the immunodominant 175-199 domain of the surface glycoprotein gp46 of human T-cell leukemia virus type I.

    abstract::Paired sera, saliva and cervicovaginal secretions from 17 HTLV-I-infected women (19-75 yr) were tested for total IgA and IgG, for IgA and IgG to the immunodominant region gp46/175-Pro-199, for serum IgG to the neutralizing domains gp46/ 190-Pro-199 and gp46/190-Ser-199, or for tax-rex proviral HTLV-DNA. Serum antibodi...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/(SICI)1096-9071(199609)50:1<42::AID-JMV9>3

    authors: Bélec L,Georges-Courbot MC,Georges A,Mohamed AS,Londos-Gagliardi D,Hallouin MC,Hocini H,Guillemain B

    更新日期:1996-09-01 00:00:00

  • An in-house-anti-hepatitis A virus (HAV)-specific immunoglobulin M capture enzyme-linked immunosorbent assay: evaluation and application to an HAV outbreak.

    abstract::An anti-hepatitis A virus (HAV)-specific immunoglobulin M capture enzyme-linked immunosorbent assay (anti-HAV IgM ELISA) kit was re-designed for laboratory use and compared with a commercial anti-HAV IgM detection system using 58 serum samples collected from patients, vaccines, and healthy individuals. Because concord...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.21578

    authors: Kiyohara T,Ouchi Y,Hasegawa Y,Sato T,Yoneyama T,Ishii K,Ito T,Wakita T

    更新日期:2009-09-01 00:00:00

  • High prevalence of GB virus C strains genetically related to strains with Asian origin in Nicaraguan hemophiliacs.

    abstract::The presence of hepatitis GB virus C (GBV-C), also known as hepatitis G virus (HGV), and hepatitis C virus (HCV) were investigated in sera from 45 hemophiliacs from nine locations in Nicaragua using a nested polymerase chain reaction (PCR). Primers used to detect GBV-C and HCV derived from the helicase region and 5'UT...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:

    authors: González-Pérez MA,Norder H,Bergström A,Lopéz E,Visoná KA,Magnius LO

    更新日期:1997-06-01 00:00:00

  • Excretion of hepatitis A virus in the stools of hospitalized hepatitis patients.

    abstract::A study was carried out to determine whether hepatitis A virus (HAV) can be detected in the stools of patients hospitalized for HAV infection. Acute phase samples of whole blood and stool, as well as completed questionnaires, were obtained from 31 patients hospitalized at any of 13 hospitals in the Phoenix metropolita...

    journal_title:Journal of medical virology

    pub_type: 杂志文章

    doi:10.1002/jmv.1890090207

    authors: Carl M,Kantor RJ,Webster HM,Fields HA,Maynard JE

    更新日期:1982-01-01 00:00:00