A novel strategy for analyzing RNA-protein interactions by surface plasmon resonance biosensor.

Abstract:

:Surface plasmon resonance (SPR) biosensor is a promising technology for its various advantages including the real-time measurement of biomolecular interactions without labeling. A method of hybridizing RNAs on the surface of the streptavidin-coated (SA) sensor chip to study RNA-protein interactions was described in this paper. In our study, it has been shown that the nucleocapsid (N) protein of severe acute respiratory syndrome coronavirus (SARS-CoV) has a high binding affinity for the leader sequence of SARS-CoV genome. Effect of temperature on the RNA-DNA hybridization was also examined. This method can provide the affinity of interactions with high sensitivity. Therefore, it will be useful in screening binding candidates for a given RNA target motif with one chip.

journal_name

Mol Biotechnol

journal_title

Molecular biotechnology

authors

Yang Y,Wang Q,Guo D

doi

10.1007/s12033-008-9066-3

subject

Has Abstract

pub_date

2008-09-01 00:00:00

pages

87-93

issue

1

eissn

1073-6085

issn

1559-0305

journal_volume

40

pub_type

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