Formation and branch migration of Holliday junctions mediated by eukaryotic recombinases.

Abstract:

:Holliday junctions (HJs) are key intermediates in homologous recombination and are especially important for the production of crossover recombinants. Bacterial RecA family proteins promote the formation and branch migration of HJs in vitro by catalysing a reciprocal DNA-strand exchange reaction between two duplex DNA molecules, one of which contains a single-stranded DNA region that is essential for initial nucleoprotein filament formation. This activity has been reported only for prokaryotic RecA family recombinases, although eukaryotic homologues are also essential for HJ production in vivo. Here we show that fission yeast (Rhp51) and human (hRad51) RecA homologues promote duplex-duplex DNA-strand exchange in vitro. As with RecA, a HJ is formed between the two duplex DNA molecules, and reciprocal strand exchange proceeds through branch migration of the HJ. In contrast to RecA, however, strand exchange mediated by eukaryotic recombinases proceeds in the 3'-->5' direction relative to the single-stranded DNA region of the substrate DNA. The opposite polarity of Rhp51 makes it especially suitable for the repair of DNA double-strand breaks, whose repair is initiated at the processed ends of breaks that have protruding 3' termini.

journal_name

Nature

journal_title

Nature

authors

Murayama Y,Kurokawa Y,Mayanagi K,Iwasaki H

doi

10.1038/nature06609

subject

Has Abstract

pub_date

2008-02-21 00:00:00

pages

1018-21

issue

7181

eissn

0028-0836

issn

1476-4687

pii

nature06609

journal_volume

451

pub_type

杂志文章

相关文献

NATURE文献大全
  • Dendritic spikes enhance stimulus selectivity in cortical neurons in vivo.

    abstract::Neuronal dendrites are electrically excitable: they can generate regenerative events such as dendritic spikes in response to sufficiently strong synaptic input. Although such events have been observed in many neuronal types, it is not well understood how active dendrites contribute to the tuning of neuronal output in ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature12600

    authors: Smith SL,Smith IT,Branco T,Häusser M

    更新日期:2013-11-07 00:00:00

  • Metastasis-suppressor transcript destabilization through TARBP2 binding of mRNA hairpins.

    abstract::Aberrant regulation of RNA stability has an important role in many disease states. Deregulated post-transcriptional modulation, such as that governed by microRNAs targeting linear sequence elements in messenger RNAs, has been implicated in the progression of many cancer types. A defining feature of RNA is its ability ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature13466

    authors: Goodarzi H,Zhang S,Buss CG,Fish L,Tavazoie S,Tavazoie SF

    更新日期:2014-09-11 00:00:00

  • Discovery of the earliest-known tetrapod stapes.

    abstract::The evolution of the middle ear is central to the discussion of how the first tetrapods adapted to life on land as well as their phylogeny. Here I report the discovery of the stapes of Acanthostega gunnari, from the Upper Devonian of east Greenland. This is the earliest tetrapod stapes so far described, and it throws ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/342425a0

    authors: Clack JA

    更新日期:1989-11-23 00:00:00

  • Predicting disease using genomics.

    abstract::Information from the human genome sequence will eventually alter many aspects of clinical practice. It will increase through our understanding of disease mechanisms, and guide the development of new drugs and therapeutic procedures. In the short term, however, knowledge of the genome will have a profound clinical impa...

    journal_title:Nature

    pub_type: 杂志文章,评审

    doi:10.1038/nature02624

    authors: Bell J

    更新日期:2004-05-27 00:00:00

  • African vegetation controlled by tropical sea surface temperatures in the mid-Pleistocene period.

    abstract::The dominant forcing factors for past large-scale changes in vegetation are widely debated. Changes in the distribution of C4 plants--adapted to warm, dry conditions and low atmospheric CO2 concentrations--have been attributed to marked changes in environmental conditions, but the relative impacts of changes in aridit...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature01500

    authors: Schefuss E,Schouten S,Jansen JH,Sinninghe Damsté JS

    更新日期:2003-03-27 00:00:00

  • Lkb1 regulates cell cycle and energy metabolism in haematopoietic stem cells.

    abstract::Little is known about metabolic regulation in stem cells and how this modulates tissue regeneration or tumour suppression. We studied the Lkb1 tumour suppressor and its substrate AMP-activated protein kinase (AMPK), kinases that coordinate metabolism with cell growth. Deletion of the Lkb1 (also called Stk11) gene in m...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature09571

    authors: Nakada D,Saunders TL,Morrison SJ

    更新日期:2010-12-02 00:00:00

  • A supernova origin for dust in a high-redshift quasar.

    abstract::Interstellar dust plays a crucial role in the evolution of the Universe by assisting the formation of molecules, by triggering the formation of the first low-mass stars, and by absorbing stellar ultraviolet-optical light and subsequently re-emitting it at infrared/millimetre wavelengths. Dust is thought to be produced...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature02930

    authors: Maiolino R,Schneider R,Oliva E,Bianchi S,Ferrara A,Mannucci F,Pedani M,Sogorb MR

    更新日期:2004-09-30 00:00:00

  • Rise of the temporary workforce.

    abstract:: ...

    journal_title:Nature

    pub_type: 评论,新闻

    doi:10.1038/d41586-019-00450-0

    authors: Gewin V

    更新日期:2019-02-01 00:00:00

  • Continuing Colorado plateau uplift by delamination-style convective lithospheric downwelling.

    abstract::The Colorado plateau is a large, tectonically intact, physiographic province in the southwestern North American Cordillera that stands at ∼1,800-2,000 m elevation and has long been thought to be in isostatic equilibrium. The origin of these high elevations is unclear because unlike the surrounding provinces, which hav...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature10001

    authors: Levander A,Schmandt B,Miller MS,Liu K,Karlstrom KE,Crow RS,Lee CT,Humphreys ED

    更新日期:2011-04-28 00:00:00

  • Role of a p53 polymorphism in the development of human papillomavirus-associated cancer.

    abstract::The E6 oncoprotein derived from tumour-associated human papillomaviruses (HPVs) binds to and induces the degradation of the cellular tumour-suppressor protein p53. A common polymorphism that occurs in the p53 amino-acid sequence results in the presence of either a proline or an arginine at position 72. The effect of t...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/30400

    authors: Storey A,Thomas M,Kalita A,Harwood C,Gardiol D,Mantovani F,Breuer J,Leigh IM,Matlashewski G,Banks L

    更新日期:1998-05-21 00:00:00

  • Fluorescent indicators for Ca2+ based on green fluorescent proteins and calmodulin.

    abstract::Important Ca2+ signals in the cytosol and organelles are often extremely localized and hard to measure. To overcome this problem we have constructed new fluorescent indicators for Ca2+ that are genetically encoded without cofactors and are targetable to specific intracellular locations. We have dubbed these fluorescen...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/42264

    authors: Miyawaki A,Llopis J,Heim R,McCaffery JM,Adams JA,Ikura M,Tsien RY

    更新日期:1997-08-28 00:00:00

  • Added noise restores recognizability of coarse quantized images.

    abstract::When a portrait is coarsely quantized into blocks, the block structure hides the face, although lower spatial frequencies of the original image sufficient by themselves for recognition are preserved. Recognition can be recovered by blurring the image, or otherwise attenuating the spurious higher spatial frequency comp...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/305226a0

    authors: Morrone MC,Burr DC,Ross J

    更新日期:1983-09-15 00:00:00

  • Cell-type-specific asynchronous modulation of PKA by dopamine in learning.

    abstract::Reinforcement learning models postulate that neurons that release dopamine encode information about action and action outcome, and provide a teaching signal to striatal spiny projection neurons in the form of dopamine release1. Dopamine is thought to guide learning via dynamic and differential modulation of protein ki...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/s41586-020-03050-5

    authors: Lee SJ,Lodder B,Chen Y,Patriarchi T,Tian L,Sabatini BL

    更新日期:2020-12-23 00:00:00

  • A circuit mechanism for differentiating positive and negative associations.

    abstract::The ability to differentiate stimuli predicting positive or negative outcomes is critical for survival, and perturbations of emotional processing underlie many psychiatric disease states. Synaptic plasticity in the basolateral amygdala complex (BLA) mediates the acquisition of associative memories, both positive and n...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature14366

    authors: Namburi P,Beyeler A,Yorozu S,Calhoon GG,Halbert SA,Wichmann R,Holden SS,Mertens KL,Anahtar M,Felix-Ortiz AC,Wickersham IR,Gray JM,Tye KM

    更新日期:2015-04-30 00:00:00

  • Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA.

    abstract::Tumour suppressor genes (TSGs) inhibiting normal cellular growth are frequently silenced epigenetically in cancer. DNA methylation is commonly associated with TSG silencing, yet mutations in the DNA methylation initiation and recognition machinery in carcinogenesis are unknown. An intriguing possible mechanism for gen...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature06468

    authors: Yu W,Gius D,Onyango P,Muldoon-Jacobs K,Karp J,Feinberg AP,Cui H

    更新日期:2008-01-10 00:00:00

  • Closing yield gaps through nutrient and water management.

    abstract::In the coming decades, a crucial challenge for humanity will be meeting future food demands without undermining further the integrity of the Earth's environmental systems. Agricultural systems are already major forces of global environmental degradation, but population growth and increasing consumption of calorie- and...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature11420

    authors: Mueller ND,Gerber JS,Johnston M,Ray DK,Ramankutty N,Foley JA

    更新日期:2012-10-11 00:00:00

  • The zootype and the phylotypic stage.

    abstract::What is it that defines an animal? The definition provided here, made on the basis of developmental biology, suggests methods for resolving phylogenetic problems. ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/361490a0

    authors: Slack JM,Holland PW,Graham CF

    更新日期:1993-02-11 00:00:00

  • Central reorganization of sensory pathways following peripheral nerve regeneration in fetal monkeys.

    abstract::Transection of a sensory nerve in adults results in profound abnormalities in sensory perception, even if the severed nerve is surgically repaired to facilitate accurate nerve regeneration. In marked contrast, fewer perceptual errors follow nerve transection and surgical repair in children. The basis for this superior...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/381069a0

    authors: Florence SL,Jain N,Pospichal MW,Beck PD,Sly DL,Kaas JH

    更新日期:1996-05-02 00:00:00

  • Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence.

    abstract::Countless millions of people have died from tuberculosis, a chronic infectious disease caused by the tubercle bacillus. The complete genome sequence of the best-characterized strain of Mycobacterium tuberculosis, H37Rv, has been determined and analysed in order to improve our understanding of the biology of this slow-...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/31159

    authors: Cole ST,Brosch R,Parkhill J,Garnier T,Churcher C,Harris D,Gordon SV,Eiglmeier K,Gas S,Barry CE 3rd,Tekaia F,Badcock K,Basham D,Brown D,Chillingworth T,Connor R,Davies R,Devlin K,Feltwell T,Gentles S,Hamlin N,Hol

    更新日期:1998-06-11 00:00:00

  • Single neurons in prefrontal cortex encode abstract rules.

    abstract::The ability to abstract principles or rules from direct experience allows behaviour to extend beyond specific circumstances to general situations. For example, we learn the 'rules' for restaurant dining from specific experiences and can then apply them in new restaurants. The use of such rules is thought to depend on ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/35082081

    authors: Wallis JD,Anderson KC,Miller EK

    更新日期:2001-06-21 00:00:00

  • A network that learns to recognize three-dimensional objects.

    abstract::The visual recognition of three-dimensional (3-D) objects on the basis of their shape poses at least two difficult problems. First, there is the problem of variable illumination, which can be addressed by working with relatively stable features such as intensity edges rather than the raw intensity images. Second, ther...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/343263a0

    authors: Poggio T,Edelman S

    更新日期:1990-01-18 00:00:00

  • Enabling the chemistry of life.

    abstract::Enzymes are the subset of proteins that catalyse the chemistry of life, transforming both macromolecular substrates and small molecules. The precise three-dimensional architecture of enzymes permits almost unerring selectivity in physical and chemical steps to impose remarkable rate accelerations and specificity in pr...

    journal_title:Nature

    pub_type: 杂志文章,评审

    doi:10.1038/35051697

    authors: Walsh C

    更新日期:2001-01-11 00:00:00

  • Role of poly(ADP-ribose) formation in DNA repair.

    abstract::The abundant nuclear enzyme poly(ADP-ribose) polymerase catalyses the synthesis of poly(ADP-ribose) from nicotinamide adenine dinucleotide (NAD+). This protein has an N-terminal DNA-binding domain containing two zinc-fingers, which is linked to the C-terminal NAD(+)-binding domain by a short region containing several ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/356356a0

    authors: Satoh MS,Lindahl T

    更新日期:1992-03-26 00:00:00

  • Major histocompatibility complex class I molecules internalized via coated pits in T lymphocytes.

    abstract::Endocytosis of the major histocompatibility complex (MHC)-encoded class I and class II molecules has been the subject of recent investigations. Class I molecules, which are key elements in T cell-mediated cytotoxicity, are differentially endocytosed by different cell types. Fibroblasts internalize their class I molecu...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/328724a0

    authors: Machy P,Truneh A,Gennaro D,Hoffstein S

    更新日期:1987-08-20 00:00:00

  • Autistic-like social behaviour in Shank2-mutant mice improved by restoring NMDA receptor function.

    abstract::Autism spectrum disorder (ASD) is a group of conditions characterized by impaired social interaction and communication, and restricted and repetitive behaviours. ASD is a highly heritable disorder involving various genetic determinants. Shank2 (also known as ProSAP1) is a multi-domain scaffolding protein and signallin...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature11208

    authors: Won H,Lee HR,Gee HY,Mah W,Kim JI,Lee J,Ha S,Chung C,Jung ES,Cho YS,Park SG,Lee JS,Lee K,Kim D,Bae YC,Kaang BK,Lee MG,Kim E

    更新日期:2012-06-13 00:00:00

  • Genetic variants regulating expression levels and isoform diversity during embryogenesis.

    abstract::Embryonic development is driven by tightly regulated patterns of gene expression, despite extensive genetic variation among individuals. Studies of expression quantitative trait loci (eQTL) indicate that genetic variation frequently alters gene expression in cell-culture models and differentiated tissues. However, the...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature20802

    authors: Cannavò E,Koelling N,Harnett D,Garfield D,Casale FP,Ciglar L,Gustafson HE,Viales RR,Marco-Ferreres R,Degner JF,Zhao B,Stegle O,Birney E,Furlong EE

    更新日期:2017-01-19 00:00:00

  • Imidazole inhibits a temperature-dependent component of mammalial skeletal muscle action potential.

    abstract::Temperature-dependent transition of conductance in ionic channels has been described in several membrane systems. We report here an abrupt change in the maximal rate of rise of the action potentials of the rat extensor digitorum longus (EDL) at 32 degrees C, indicating alteration in the functional characteristics of t...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/283485a0

    authors: Cheung DW,Daniel EE

    更新日期:1980-01-31 00:00:00

  • The SMAD2/3 interactome reveals that TGFβ controls m6A mRNA methylation in pluripotency.

    abstract::The TGFβ pathway has essential roles in embryonic development, organ homeostasis, tissue repair and disease. These diverse effects are mediated through the intracellular effectors SMAD2 and SMAD3 (hereafter SMAD2/3), whose canonical function is to control the activity of target genes by interacting with transcriptiona...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature25784

    authors: Bertero A,Brown S,Madrigal P,Osnato A,Ortmann D,Yiangou L,Kadiwala J,Hubner NC,de Los Mozos IR,Sadée C,Lenaerts AS,Nakanoh S,Grandy R,Farnell E,Ule J,Stunnenberg HG,Mendjan S,Vallier L

    更新日期:2018-03-08 00:00:00

  • Unified response to bilateral hemispheric stimulation by a split-brain patient.

    abstract::Surgical sectioning of the corpus callosum in epileptic patients has provided a unique opportunity to study separately the competence and processing capacities of the two cerebral hemispheres, each of which is able to perceive, think, memorize and learn independently and essentially outside the realm of awareness of t...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/305800a0

    authors: Sergent J

    更新日期:1983-10-27 00:00:00

  • Structural basis of the activation of a metabotropic GABA receptor.

    abstract::Metabotropic γ-aminobutyric acid receptors (GABAB) are involved in the modulation of synaptic responses in the central nervous system and have been implicated in neuropsychological conditions that range from addiction to psychosis1. GABAB belongs to class C of the G-protein-coupled receptors, and its functional entity...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/s41586-020-2408-4

    authors: Shaye H,Ishchenko A,Lam JH,Han GW,Xue L,Rondard P,Pin JP,Katritch V,Gati C,Cherezov V

    更新日期:2020-08-01 00:00:00