RpoS-regulated genes of Escherichia coli identified by random lacZ fusion mutagenesis.

Abstract:

:RpoS is a conserved alternative sigma factor that regulates the expression of many stress response genes in Escherichia coli. The RpoS regulon is large but has not yet been completely characterized. In this study, we report the identification of over 100 RpoS-dependent fusions in a genetic screen based on the differential expression of an operon-lacZ fusion bank in rpoS mutant and wild-type backgrounds. Forty-eight independent gene fusions were identified, including several in well-characterized RpoS-regulated genes, such as osmY, katE, and otsA. Many of the other fusions mapped to genes of unknown function or to genes that were not previously known to be under RpoS control. Based on the homology to other known bacterial genes, some of the RpoS-regulated genes of unknown functions are likely important in nutrient scavenging.

journal_name

J Bacteriol

journal_title

Journal of bacteriology

authors

Vijayakumar SR,Kirchhof MG,Patten CL,Schellhorn HE

doi

10.1128/JB.186.24.8499-8507.2004

keywords:

subject

Has Abstract

pub_date

2004-12-01 00:00:00

pages

8499-507

issue

24

eissn

0021-9193

issn

1098-5530

pii

186/24/8499

journal_volume

186

pub_type

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