Genomic organization and genetic mapping of the neuroimmune gene I2rf5 to mouse chromosome 4.

Abstract:

:The nervous and immune systems share many functional and molecular similarities, including shared surface antigens, secretions of soluble factors, and cross-modulatory effects. We have identified previously a novel mRNA termed F5, which is expressed only in activated T lymphocytes and mature, postmitotic neurons. Tissue specificity and sequence conservation suggest an important function for F5 in T-lymphocyte proliferation and neuronal maturation. The F5 gene product is an evolutionarily conserved, cytoskeletal-associated phosphoprotein. A full-length mouse genomic clone has been isolated. The protein coding region of the F5 gene is approximately 16 kb in length and is composed of 13 coding exons. The gene encoding F5, termed I2rf5, was mapped using interspecies mouse crosses in close proximity to a number of genes associated with neuronal defects on distal chromosome 4.

journal_name

Genomics

journal_title

Genomics

authors

Autieri MV,Kozak CA,Cohen JA,Prystowsky MB

doi

10.1016/0888-7543(95)80137-b

subject

Has Abstract

pub_date

1995-01-01 00:00:00

pages

282-4

issue

1

eissn

0888-7543

issn

1089-8646

pii

0888-7543(95)80137-B

journal_volume

25

pub_type

杂志文章

相关文献

GENOMICS文献大全
  • A map of the distal region of the long arm of human chromosome 21 constructed by radiation hybrid mapping and pulsed-field gel electrophoresis.

    abstract::We have used radiation hybrid (RH) mapping and pulsed-field gel electrophoresis (PFGE) to determine the order and positions of 28 DNA markers from the distal region of the long arm of human chromosome 21. The maps generated by these two methods are in good agreement. This study, combined with that of D. R. Cox et al. ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(91)90216-2

    authors: Burmeister M,Kim S,Price ER,de Lange T,Tantravahi U,Myers RM,Cox DR

    更新日期:1991-01-01 00:00:00

  • Exon-intron organization of the human dystrophin gene.

    abstract::Analysis of the exon-intron organization of the human dystrophin gene has been hampered by its enormous size. By using a YAC-based exon mapping approach and long PCR, we have succeeded in defining the size of the gene and its organization. Our results, compared with data on the distribution of deletion breakpoints by ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4911

    authors: Nobile C,Marchi J,Nigro V,Roberts RG,Danieli GA

    更新日期:1997-10-15 00:00:00

  • Identification and chromosomal mapping of the mouse inositol polyphosphate 1-phosphatase gene.

    abstract::A mouse inositol polyphosphate 1-phosphatase (Inpp1) cDNA fragment (348 bp) was amplified by means of the polymerase chain reaction using a mouse cDNA library as template with primers designed from published human and bovine cDNA sequences. We isolated a 1623-bp full-length Inpp1 cDNA from a mouse brain cDNA library u...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.0030

    authors: Okabe I,Nussbaum RL

    更新日期:1995-11-20 00:00:00

  • Mapping long-range chromatin organization within the chicken alpha-globin gene domain using oligonucleotide DNA arrays.

    abstract::We have analyzed the organization of the chicken alpha-globin gene domain using DNA miniarrays and have found two novel chromatin loop attachment regions. We have found a 40-kb loop domain that includes all the alpha-globin genes in cells of erythroid origin. One of the domain borders colocalizes almost exactly with a...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2004.09.008

    authors: Ioudinkova E,Petrov A,Razin SV,Vassetzky YS

    更新日期:2005-01-01 00:00:00

  • YAC contig organization and CpG island analysis in Xq28.

    abstract::One hundred nineteen YACs were assembled into 6 contigs spanning about 7.1 Mb of Xq28. The contigs were formatted with 65 STSs and 136 hybridization probes and were extensive enough to be aligned and oriented by published genetic linkage and somatic cell hybrid panel data. Selected YACs from the entire region were map...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1592

    authors: Palmieri G,Romano G,Ciccodicola A,Casamassimi A,Campanile C,Esposito T,Cappa V,Lania A,Johnson S,Reinbold R

    更新日期:1994-11-01 00:00:00

  • Localization of the gene for the ciliary neurotrophic factor receptor (CNTFR) to human chromosome 9.

    abstract::Ciliary neurotrophic factor (CNTF) has recently been found to be important for the survival of motor neurons and has shown activity in animal models of amyotrophic lateral sclerosis (ALS). CNTF therefore holds promise as a treatment for ALS, and it and its receptor (CNTFR) are candidates for a gene involved in familia...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1409

    authors: Donaldson DH,Britt DE,Jones C,Jackson CL,Patterson D

    更新日期:1993-09-01 00:00:00

  • Molecular cloning and characterization of NEU4, the fourth member of the human sialidase gene family.

    abstract::Several mammalian sialidases have been cloned so far and here we describe the identification and expression of a new member of the human sialidase gene family. The NEU4 gene, identified by searching sequence databases for entries showing homologies to the human cytosolic sialidase NEU2, maps in 2q37 and encodes a 484-...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2003.08.019

    authors: Monti E,Bassi MT,Bresciani R,Civini S,Croci GL,Papini N,Riboni M,Zanchetti G,Ballabio A,Preti A,Tettamanti G,Venerando B,Borsani G

    更新日期:2004-03-01 00:00:00

  • Direct evidence for homologous sequences on the paracentric regions of human chromosome 1.

    abstract::Calcyclin is a member of the S100 family of proteins, many of which are encoded by genes that have been localized to the proximal long arm of human chromosome 1 (bands q21-q22). A 450-kb yeast artificial chromosome clone containing the human calcyclin gene was identified by PCR screening and used as a probe for fluore...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1277

    authors: Hardas BD,Zhang J,Trent JM,Elder JT

    更新日期:1994-05-15 00:00:00

  • Physical mapping within the tuberous sclerosis linkage group in region 9q32-q34.

    abstract::Pulsed-field gel electrophoresis and flow dot-blot analysis have been used to construct a physical map of the q32-q34 region of chromosome 9, where one of the loci responsible for tuberous sclerosis (TSC1) has been mapped by genetic linkage. Five linked groups of markers have been defined by pulsed-field gel electroph...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1056

    authors: Harris RM,Carter NP,Griffiths B,Goudie D,Hampson RM,Yates JR,Affara NA,Ferguson-Smith MA

    更新日期:1993-02-01 00:00:00

  • The HOX-5 and surfeit gene clusters are linked in the proximal portion of mouse chromosome 2.

    abstract::Using an interspecies backcross, we have mapped the HOX-5 and surfeit (surf) gene clusters within the proximal portion of mouse chromosome 2. While the HOX-5 cluster of homeobox-containing genes has been localized to chromosome 2, bands C3-E1, by in situ hybridization, its more precise position relative to the genes a...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(90)90499-k

    authors: Stubbs L,Huxley C,Hogan B,Evans T,Fried M,Duboule D,Lehrach H

    更新日期:1990-04-01 00:00:00

  • A novel human Mcm protein: homology to the yeast replication protein Mis5 and chromosomal location.

    abstract::Mcm proteins perform functions related to the regulation of eukaryotic genome replication. Previous work has shown that human cells contain at least five different Mcm proteins. We report now the amino acid sequence of an additional human Mcm protein, p105Mcm, and show that it is homologous to the Schizosaccharomyces ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0530

    authors: Holthoff HP,Hameister H,Knippers R

    更新日期:1996-10-01 00:00:00

  • Multiple inositol polyphosphate phosphatase: evolution as a distinct group within the histidine phosphatase family and chromosomal localization of the human and mouse genes to chromosomes 10q23 and 19.

    abstract::Multiple inositol polyphosphate phosphatase is the only enzyme known to hydrolyze the abundant metabolites inositol pentakisphosphate and inositol hexakisphosphate. We have previously demonstrated that the chick homolog of multiple inositol polyphosphate phosphatase, designated HiPER1, has a role in growth plate chond...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5736

    authors: Chi H,Tiller GE,Dasouki MJ,Romano PR,Wang J,O'keefe RJ,Puzas JE,Rosier RN,Reynolds PR

    更新日期:1999-03-15 00:00:00

  • Genomic sequence, organization, and chromosomal localization of human JAK3.

    abstract::Members of the Janus (JAK) protein tyrosine kinase family including JAK3 have recently emerged as important components in cytokine signal transduction. Mutations of JAK3 have been found in a number of patients who present with severe combined immunodeficiency. To facilitate the further identification of JAK3-SCID pati...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0520

    authors: Riedy MC,Dutra AS,Blake TB,Modi W,Lal BK,Davis J,Bosse A,O'Shea JJ,Johnston JA

    更新日期:1996-10-01 00:00:00

  • Mapping and characterization of non-HLA multigene assemblages in the human MHC class I region.

    abstract::The major histocompatibility complex (MHC) class I region has been shown to be associated with a variety of immune and nonimmune disorders. In an effort to initiate steps designed to identify the idiopathic hemochromatosis disease gene (HFE), we have cloned and mapped two expressed messages using probes from the HLA-H...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1382

    authors: Venditti CP,Harris JM,Geraghty DE,Chorney MJ

    更新日期:1994-07-15 00:00:00

  • Pax1, a member of the paired box-containing class of developmental control genes, is mapped to human chromosome 20p11.2 by in situ hybridization (ISH and FISH).

    abstract::Pax-1, a member of a murine multigene family, belongs to the paired box-containing class of developmental control genes first identified in Drosophila. The Pax-1 gene encodes a sequence-specific DNA-binding protein with transcriptional activating properties and has been found to be mutated in the autosomal recessive m...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(05)80177-6

    authors: Schnittger S,Rao VV,Deutsch U,Gruss P,Balling R,Hansmann I

    更新日期:1992-11-01 00:00:00

  • Retroposon compensatory mechanism hypothesis not supported: Zfa knockout mice are fertile.

    abstract::It is hypothesized that autosomal retroposons compensate for the loss of their inactivated essential X-chromosome progenitors during spermatogenesis. Here we test this Retroposon Compensatory Mechanism (RCM) hypothesis using the Zfy gene family. The mouse autosomal retroposon Zfa is expressed in testes at the same dev...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(03)00155-1

    authors: Banks KG,Johnson KA,Lerner CP,Mahaffey CL,Bronson RT,Simpson EM

    更新日期:2003-09-01 00:00:00

  • Practicability of detecting somatic point mutation from RNA high throughput sequencing data.

    abstract::Traditionally, somatic mutations are detected by examining DNA sequence. The maturity of sequencing technology has allowed researchers to screen for somatic mutations in the whole genome. Increasingly, researchers have become interested in identifying somatic mutations through RNAseq data. With this motivation, we eva...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2016.03.006

    authors: Sheng Q,Zhao S,Li CI,Shyr Y,Guo Y

    更新日期:2016-05-01 00:00:00

  • Prioritizing drug targets in Clostridium botulinum with a computational systems biology approach.

    abstract::A computational and in silico system level framework was developed to identify and prioritize the antibacterial drug targets in Clostridium botulinum (Clb), the causative agent of flaccid paralysis in humans that can be fatal in 5 to 10% of cases. This disease is difficult to control due to the emergence of drug-resis...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2014.05.002

    authors: Muhammad SA,Ahmed S,Ali A,Huang H,Wu X,Yang XF,Naz A,Chen J

    更新日期:2014-07-01 00:00:00

  • Genomic imprinting and chromosomal localization of the human MEST gene.

    abstract::We have isolated a human homologue (MEST) of the mouse mesoderm-specific transcript (Mest) gene that shares about 70% nucleotide sequence homology. Northern blot analysis showed that the MEST gene was expressed in all major fetal organs and tissues so far examined, i.e., amnion, brain, heart, lung, stomach, gut, adren...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0502

    authors: Nishita Y,Yoshida I,Sado T,Takagi N

    更新日期:1996-09-15 00:00:00

  • BMT: Bioinformatics mini toolbox for comprehensive DNA and protein analysis.

    abstract::Background Bioinformatics tools are of great significance and are used in different spheres of life sciences. There are wide variety of tools available to perform primary analysis of DNA and protein but most of them are available on different platforms and many remain undetected. Accessing these tools separately to pe...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2020.08.010

    authors: Iqbal MN,Rasheed MA,Awais M,Chammam W,Kanwal S,Khan SU,Saddick S,Tlili I

    更新日期:2020-11-01 00:00:00

  • Revealing new landscape of cardiovascular disease through circular RNA-miRNA-mRNA axis.

    abstract::Non-coding RNA (ncRNA) is a kind of RNA, produced by genomic transcription and does not encode protein, but can regulate the function of genes, thus widely regulating pathological and physiological processes. The dynamic balance of the reticular structure between them is needed to regulate the homeostasis, the abnorma...

    journal_title:Genomics

    pub_type: 杂志文章,评审

    doi:10.1016/j.ygeno.2019.10.006

    authors: Su Q,Lv X

    更新日期:2020-03-01 00:00:00

  • Regional localization of human chromosome 15 loci.

    abstract::One hundred forty-nine chromosome 15 loci were mapped by PCR with respect to chromosome breakpoints in three somatic cell hybrids retaining total or part of chromosome 15 and to a 10-Mb YAC contig. This chromosome was subdivided into 5 regions, yielding an average resolution of more than 1 sequence tagged site per meg...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1550

    authors: Richard I,Broux O,Chiannilkulchai N,Fougerousse F,Allamand V,Bourg N,Brenguier L,Devaud C,Pasturaud P,Roudaut C

    更新日期:1994-10-01 00:00:00

  • Sequencing, transcript identification, and quantitative gene expression profiling in the breast cancer loss of heterozygosity region 16q24.3 reveal three potential tumor-suppressor genes.

    abstract::Loss of heterozygosity (LOH) of chromosome 16q24.3 is a common genetic alteration observed in invasive ductal and lobular breast carcinomas. We constructed a physical map and generated genomic DNA sequence data spanning 2.4 Mb in this region. Detailed in silico and in vitro analyses of the genomic sequence data enable...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2002.6828

    authors: Powell JA,Gardner AE,Bais AJ,Hinze SJ,Baker E,Whitmore S,Crawford J,Kochetkova M,Spendlove HE,Doggett NA,Sutherland GR,Callen DF,Kremmidiotis G

    更新日期:2002-09-01 00:00:00

  • Associations of UBE2I with RAD52, UBL1, p53, and RAD51 proteins in a yeast two-hybrid system.

    abstract::The yeast RAD52-dependent pathway is involved in DNA recombination and double-strand break repair. Yeast ubiquitin-conjugating enzyme UBC9 participates in S- and M-phase cyclin degradation and mitotic control. Using the human RAD52 protein as the "bait" in a yeast two-hybrid system, we have identified a human homolog ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0540

    authors: Shen Z,Pardington-Purtymun PE,Comeaux JC,Moyzis RK,Chen DJ

    更新日期:1996-10-15 00:00:00

  • Molecular cloning and mapping of a human cDNA for cytosolic malate dehydrogenase (MDH1).

    abstract::We have isolated a human cDNA encoding a protein of 334 amino acids that shows 96% identity in amino acid sequence to murine cytosolic malate dehydrogenase. Heart and skeletal muscle expressed this gene most highly among the adult human tissues examined by Northern blot analysis. By fluorescence in situ hybridization,...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0087

    authors: Tanaka T,Inazawa J,Nakamura Y

    更新日期:1996-02-15 00:00:00

  • Ranking analysis of correlation coefficients in gene expressions.

    abstract::Development of statistical methods has become very necessary for large-scale correlation analysis in the current "omic" data. We propose ranking analysis of correlation coefficients (RAC) based on transforming correlation matrix into correlation vector and conducting a "locally ranking" strategy that significantly red...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2010.09.002

    authors: Tan YD

    更新日期:2011-01-01 00:00:00

  • Chromosomal localization of the human heme oxygenase genes: heme oxygenase-1 (HMOX1) maps to chromosome 22q12 and heme oxygenase-2 (HMOX2) maps to chromosome 16p13.3.

    abstract::Heme oxygenase catalyzes the oxidation of heme to biliverdin, the precursor of the bile pigment bilirubin, and carbon monoxide, a putative neurotransmitter. We have employed polymerase chain reaction and fluorescence in situ hybridization to determine the chromosome localization of the genes coding for the two known h...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1213

    authors: Kutty RK,Kutty G,Rodriguez IR,Chader GJ,Wiggert B

    更新日期:1994-04-01 00:00:00

  • Chromosomal assignment of 46 brain cDNAs.

    abstract::Expressed sequence tags (ESTs) have been obtained from several hundred brain cDNAs as an initial effort to characterize expressed brain genes. These ESTs will become tools for human genome mapping and they will also provide candidate causative genes for inherited disorders affecting the central nervous system. We have...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(92)90439-y

    authors: Polymeropoulos MH,Xiao H,Glodek A,Gorski M,Adams MD,Moreno RF,Fitzgerald MG,Venter JC,Merril CR

    更新日期:1992-03-01 00:00:00

  • Chromosomal localization of the human genes for alpha 1A, alpha 1B, and alpha 1E voltage-dependent Ca2+ channel subunits.

    abstract::The alpha 1 subunit genes encoding voltage-dependent Ca2+ channels are members of a gene family. We have used human brain cDNA probes to localize the neuronal isoform genes CACNL1A4 (alpha 1A), CACNL1A5 (alpha 1B), and CACNL1A6 (alpha 1E) to 19p13, 9q34, and 1q25-q31, respectively, using fluorescence in situ hybridiza...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.1284

    authors: Diriong S,Lory P,Williams ME,Ellis SB,Harpold MM,Taviaux S

    更新日期:1995-12-10 00:00:00

  • Characterization of a human gene encoding nucleosomal binding protein NSBP1.

    abstract::We characterize the cDNA and genomic structure of NSBP1, and demonstrate that it is a nuclear protein and the homologue of mouse Nsbp1, which is known to encode a nucleosomal binding and transcriptional activating protein related to the HMG-14/-17 chromosomal proteins. The encoded NSBP1 protein has 86% amino acid simi...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2000.6443

    authors: King LM,Francomano CA

    更新日期:2001-01-15 00:00:00