Pax1, a member of the paired box-containing class of developmental control genes, is mapped to human chromosome 20p11.2 by in situ hybridization (ISH and FISH).

Abstract:

:Pax-1, a member of a murine multigene family, belongs to the paired box-containing class of developmental control genes first identified in Drosophila. The Pax-1 gene encodes a sequence-specific DNA-binding protein with transcriptional activating properties and has been found to be mutated in the autosomal recessive mutation undulated (un) on mouse chromosome 2 with vertebral anomalies along the entire rostrocaudal axis. By radioactive in situ hybridization (ISH) using a fragment from the murine Pax-1 paired box that is almost identical to the respective sequences from the cognate human gene HuP48 and fluorescence in situ hybridization (FISH) using a complete mouse Pax-1 cDNA, we have assigned the human homologue of murine Pax-1, the PAX1 locus, to chromosome 20p. The map position of PAX1 after FISH (FL-pter value of 0.34 +/- 0.04) corresponds to band p11.2. These results confirm the exceptional homology between human chromosome 20 and the distal segment of mouse chromosome 2, extending from bands F to G, and add PAX1 to the group of genes on 20p like PTPA, PRNP, SCG1, BMP2A, which are located in proximity on both chromosomes.

journal_name

Genomics

journal_title

Genomics

authors

Schnittger S,Rao VV,Deutsch U,Gruss P,Balling R,Hansmann I

doi

10.1016/s0888-7543(05)80177-6

subject

Has Abstract

pub_date

1992-11-01 00:00:00

pages

740-4

issue

3

eissn

0888-7543

issn

1089-8646

journal_volume

14

pub_type

杂志文章

相关文献

GENOMICS文献大全
  • Conservation of position and sequence of a novel, widely expressed gene containing the major human alpha-globin regulatory element.

    abstract::We have determined the cDNA and genomic structure of a gene (-14 gene) that lies adjacent to the human alpha-globin cluster. Although it is expressed in a wide range of cell lines and tissues, a previously described erythroid-specific regulatory element that controls expression of the alpha-globin genes lies within in...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.9951

    authors: Vyas P,Vickers MA,Picketts DJ,Higgs DR

    更新日期:1995-10-10 00:00:00

  • Epigenetic status of the H19 locus in human oocytes following in vitro maturation.

    abstract::Imprinting is an epigenetic modification that is reprogrammed in the germ line and leads to the monoallelic expression of some genes. Imprinting involves DNA methylation. Maternal imprint is reset during oocyte growth and maturation. In vitro maturation (IVM) of oocytes may, therefore, interfere with imprint acquisiti...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2005.10.008

    authors: Borghol N,Lornage J,Blachère T,Sophie Garret A,Lefèvre A

    更新日期:2006-03-01 00:00:00

  • Structure and polymorphism of the mouse myelin/oligodendrocyte glycoprotein gene.

    abstract::We have isolated and characterized genomic clones containing the mouse myelin/oligodendrocyte glycoprotein (MOG) gene. It spans a region of 12.5 kb and consists of eight exons. Its exon-intron structure differs from that of classical MHC-class I genes, with which it is linked in the mouse genome. Nucleotide sequencing...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1456

    authors: Daubas P,Pham-Dinh D,Dautigny A

    更新日期:1994-09-01 00:00:00

  • Practicability of detecting somatic point mutation from RNA high throughput sequencing data.

    abstract::Traditionally, somatic mutations are detected by examining DNA sequence. The maturity of sequencing technology has allowed researchers to screen for somatic mutations in the whole genome. Increasingly, researchers have become interested in identifying somatic mutations through RNAseq data. With this motivation, we eva...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2016.03.006

    authors: Sheng Q,Zhao S,Li CI,Shyr Y,Guo Y

    更新日期:2016-05-01 00:00:00

  • Isolation and regional assignment of human chromosome 12p cDNAs.

    abstract::We have characterized 117 cDNAs isolated by direct cDNA selection using pools of human chromosome 12p cosmids. Sequencing revealed that 41 clones did overlap with other cDNAs. Of the remaining 76 cDNA sequences, 11 matched previously identified human chromosome 12p genes and 3 matched previously determined cDNA sequen...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.1213

    authors: Baens M,Aerssens J,van Zand K,Van den Berghe H,Marynen P

    更新日期:1995-09-01 00:00:00

  • Molecular cloning and characterization of the mouse carboxyl ester lipase gene and evidence for expression in the lactating mammary gland.

    abstract::DNA hybridization was used to isolate a 2.04-kb cDNA encoding carboxyl ester lipase (CEL) from a mouse lactating mammary gland, lambda gt10 cDNA library. The cDNA sequence translated into a protein of 599 amino acids, including 20 amino acids of a putative signal peptide. Comparison of the deduced amino acid sequence ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.1221

    authors: Lidmer AS,Kannius M,Lundberg L,Bjursell G,Nilsson J

    更新日期:1995-09-01 00:00:00

  • Genomic structure and chromosome location of the human mutT homologue gene MTH1 encoding 8-oxo-dGTPase for prevention of A:T to C:G transversion.

    abstract::8-Oxo-dGTP (8-oxo-7,8-dihydrodeoxyguanosine triphosphate) is produced by active oxygen species in the nucleotide pool of the cell and can be incorporated into cellular DNA. Human cells contain enzyme activity that hydrolyzes 8-oxo-dGTP to 8-oxo-dGMP, thereby preventing occurrence of mutations, caused by misincorporati...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1657

    authors: Furuichi M,Yoshida MC,Oda H,Tajiri T,Nakabeppu Y,Tsuzuki T,Sekiguchi M

    更新日期:1994-12-01 00:00:00

  • Assignment of the human pulmonary surfactant protein D gene (SFTP4) to 10q22-q23 close to the surfactant protein A gene cluster.

    abstract::Pulmonary surfactant consists of a complex mixture of phospholipids and several proteins essential to normal respiratory function. Two of the surfactant proteins, SP-A and SP-D, appear to have lectin-like activity relevant to the local phagocytic defense. Using polymerase chain reaction (PCR)-based somatic cell hybrid...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1324

    authors: Kölble K,Lu J,Mole SE,Kaluz S,Reid KB

    更新日期:1993-08-01 00:00:00

  • The boundary of macaque rDNA is constituted by low-copy sequences conserved during evolution.

    abstract::In Macaca mulatta, the single rDNA array is flanked by a patchwork of sequences including subregions of human Yp11.2, 4q35.2, and 10p15.3. This composite DNA region is characterized by unique or low-copy sequences, resembling a potentially transcribed region. The analysis of Cercopithecus aethiops, Presbytis cristata,...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2006.05.001

    authors: Bodega B,Cardone MF,Rocchi M,Meneveri R,Marozzi A,Ginelli E

    更新日期:2006-11-01 00:00:00

  • Molecular cloning and chromosomal mapping of the mouse cyclin-dependent kinase 5 gene.

    abstract::Cyclin-dependent kinase 5 (Cdk5) is predominantly expressed in neurons. In vitro, Cdk5 purified from the nervous tissue phosphorylates both high-molecular-weight neurofilament and microtubule-associated tau. The mouse gene encoding Cdk5 (Cdk5) was found to be 5 kb in length and divided into 12 exons. All of the exon-i...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.1194

    authors: Ohshima T,Nagle JW,Pant HC,Joshi JB,Kozak CA,Brady RO,Kulkarni AB

    更新日期:1995-08-10 00:00:00

  • Genetic and physical mapping of the dreher locus on mouse chromosome 1.

    abstract::Mutations in the mouse dreher (dr) gene cause skeletal defects, hyperactivity, abnormal gait, deafness, white belly spotting, and hypoplasia of Müllerian duct derivatives. To map dr to high resolution, we utilized two crosses. Initially, we analyzed an intersubspecific intercross to construct a detailed genetic map of...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1999.5873

    authors: Bergstrom DE,Gagnon LH,Eicher EM

    更新日期:1999-08-01 00:00:00

  • Fine-scale comparative mapping of the human 7q11.23 region and the orthologous region on mouse chromosome 5G: the low-copy repeats that flank the Williams-Beuren syndrome deletion arose at breakpoint sites of an evolutionary inversion(s).

    abstract::Williams-Beuren syndrome (WBS) is a developmental disorder caused by haploinsufficiency for genes deleted in chromosome band 7q11.23. A common deletion including at least 16-17 genes has been defined in the great majority of patients. We have completed a physical and transcription map of the WBS region based on analys...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2000.6312

    authors: Valero MC,de Luis O,Cruces J,Pérez Jurado LA

    更新日期:2000-10-01 00:00:00

  • The proximity of DNA sequences in interphase cell nuclei is correlated to genomic distance and permits ordering of cosmids spanning 250 kilobase pairs.

    abstract::The physical distance between DNA sequences in interphase nuclei was determined using eight cosmids containing fragments of the Chinese hamster genome that span 273 kb surrounding the dihydrofolate reductase (DHFR) gene. The distance between these sequences at the molecular level has been determined previously by rest...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(89)90112-2

    authors: Trask B,Pinkel D,van den Engh G

    更新日期:1989-11-01 00:00:00

  • The mouse neurofibromatosis type 2 gene maps to chromosome 11.

    abstract::Neurofibromatosis type 2 (NF2) is a dominantly inherited disease characterized by the development of bilateral vestibular schwannomas and meningiomas, which together represent 30% of primary brain tumors. The NF2 gene, which has recently been isolated, maps to the long arm of human chromosome 22. Using recombinant inb...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1291

    authors: Claudio JO,Malo D,Rouleau GA

    更新日期:1994-05-15 00:00:00

  • Cloning and characterization of human erythroid membrane-associated protein, human ERMAP.

    abstract::We describe here the cloning and characterization of the human gene ERMAP, identified by subtractive hybridization using early and late gestation human fetal liver. By in situ hybridization, we found human ERMAP to be expressed not only in erythoid cells in fetal liver and adult bone marrow, but also in reticulocytes ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2001.6600

    authors: Xu H,Foltz L,Sha Y,Madlansacay MR,Cain C,Lindemann G,Vargas J,Nagy D,Harriman B,Mahoney W,Schueler PA

    更新日期:2001-08-01 00:00:00

  • A genome survey for novel Alzheimer disease risk loci: results at 10-cM resolution.

    abstract::We completed a systematic survey of the human genome, conducted at an average resolution of 10 cM, for the identification of simple sequence tandem repeat polymorphisms (SSTRPs) that target new risk genes for Alzheimer disease (AD) by virtue of linkage disequilibrium. The efficiency of our association study was enhanc...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5306

    authors: Zubenko GS,Hughes HB,Stiffler JS,Hurtt MR,Kaplan BB

    更新日期:1998-06-01 00:00:00

  • Construction and screening of a cosmid library generated from a somatic cell hybrid bearing human chromosome 15.

    abstract::A cosmid library has been constructed with DNA isolated from a mouse/human hybrid cell line designated A15, which was previously characterized and shown to retain chromosome 15 as the only human material. The library was generated and stored as 34 independent pools of primary colonies at 8-10,000 colonies per pool. Sc...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.4517

    authors: McDaniel LD,Zhang B,Kubiczek E,Ritter M,Huang J,Berard C,Leana-Cox J,Schwartz S,Schultz RA

    更新日期:1997-02-15 00:00:00

  • Detection of potential GDF6 regulatory elements by multispecies sequence comparisons and identification of a skeletal joint enhancer.

    abstract::The identification of noncoding functional elements within vertebrate genomes, such as those that regulate gene expression, is a major challenge. Comparisons of orthologous sequences from multiple species are effective at detecting highly conserved regions and can reveal potential regulatory sequences. The GDF6 gene c...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2005.05.003

    authors: Portnoy ME,McDermott KJ,Antonellis A,Margulies EH,Prasad AB,NISC Comparative Sequencing Program.,Kingsley DM,Green ED,Mortlock DP

    更新日期:2005-09-01 00:00:00

  • PANORAMA: an integrated Web-based sequence analysis tool and its role in gene discovery.

    abstract::As the exponential growth of DNA sequence information in databases continues, the task of converting this deposited information into knowledge becomes more dependent on integrative sequence analysis and visualization tools. PANORAMA is an Internet-accessible software package that performs a variety of informatics anal...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2000.6359

    authors: Pertsemlidis A,Pande A,Miller B,Schilling P,Wei MH,Lerman MI,Minna JD,Garner HR,Mittelman D

    更新日期:2000-12-15 00:00:00

  • Multiple inositol polyphosphate phosphatase: evolution as a distinct group within the histidine phosphatase family and chromosomal localization of the human and mouse genes to chromosomes 10q23 and 19.

    abstract::Multiple inositol polyphosphate phosphatase is the only enzyme known to hydrolyze the abundant metabolites inositol pentakisphosphate and inositol hexakisphosphate. We have previously demonstrated that the chick homolog of multiple inositol polyphosphate phosphatase, designated HiPER1, has a role in growth plate chond...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5736

    authors: Chi H,Tiller GE,Dasouki MJ,Romano PR,Wang J,O'keefe RJ,Puzas JE,Rosier RN,Reynolds PR

    更新日期:1999-03-15 00:00:00

  • Localization of the human tripeptidyl peptidase II gene (TPP2) to 13q32-q33 by nonradioactive in situ hybridization and somatic cell hybrids.

    abstract::We have assigned the human tripeptidyl peptidase II (TPP2) gene to chromosome region 13q32-q33 using two different methods. First, a full-length TPP2 cDNA was used as a probe on Southern blots of DNA from a panel of human/rodent somatic cell hybrids. The TPP2 sequences were found to segregate with the human chromosome...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1353

    authors: Martinsson T,Vujic M,Tomkinson B

    更新日期:1993-08-01 00:00:00

  • Mapping of genetic modulators of natural resistance to infection with Salmonella typhimurium in wild-derived mice.

    abstract::Despite antibiotic therapy and vaccination programs, microbial diseases continue to be the leading cause of morbidity and mortality worldwide. The genetic basis of the host response to infection is complex, and its understanding has been facilitated through the study of mouse models of human infectious diseases. Genet...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.5116

    authors: Sebastiani G,Olien L,Gauthier S,Skamene E,Morgan K,Gros P,Malo D

    更新日期:1998-01-15 00:00:00

  • Localized breakdown in linkage disequilibrium does not always predict sperm crossover hot spots in the human MHC class II region.

    abstract::To investigate the relationship between meiotic crossover hot spots and block-like linkage disequilibrium (LD), we have extended our high-resolution studies of the human MHC class II region to a 90-kb segment upstream of the HLA-DOA gene. LD blocks in this region are not as well defined as in the neighboring 210-kb DN...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2005.03.011

    authors: Kauppi L,Stumpf MP,Jeffreys AJ

    更新日期:2005-07-01 00:00:00

  • Maternal and paternal chromosomes 7 show differential methylation of many genes in lymphoblast DNA.

    abstract::Genomic imprinting, the differential expression of paternal and maternal alleles, involves many chromosomal regions and plays a role in development and growth. Differential methylation of maternal and paternal alleles is a hallmark of imprinted genes, and thus methylation assays are widely used to support the identifi...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2001.6502

    authors: Hannula K,Lipsanen-Nyman M,Scherer SW,Holmberg C,Höglund P,Kere J

    更新日期:2001-04-01 00:00:00

  • Isolation and fine mapping of 16 novel human zinc finger-encoding cDNAs identify putative candidate genes for developmental and malignant disorders.

    abstract::We have isolated and chromosomally fine-mapped 16 novel genes belonging to the human zinc finger Krüppel family (ZNF131-140, 142, 143, 148, 151, 154, and 155), including 1 of the GLI type (ZNF143) and 3 containing a KRAB (Krüppel-associated box) segment (ZNF133, 136, and 140). Based on their map position, several of t...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.1040

    authors: Tommerup N,Vissing H

    更新日期:1995-05-20 00:00:00

  • Genomic structure of the EWS gene and its relationship to EWSR1, a site of tumor-associated chromosome translocation.

    abstract::The EWS gene has been identified based on its location at the chromosome 22 breakpoint of the t(11;22)(q24;q12) translocation that characterizes Ewing sarcoma and related neuroectodermal tumors. The EWS gene spans about 40 kb of DNA and is encoded by 17 exons. The nucleotide sequence of the exons is identical to that ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(05)80363-5

    authors: Plougastel B,Zucman J,Peter M,Thomas G,Delattre O

    更新日期:1993-12-01 00:00:00

  • cDNA cloning and gene structure of a novel water channel expressed exclusively in human kidney: evidence for a gene cluster of aquaporins at chromosome locus 12q13.

    abstract::A 1.8-kb cDNA clone (designed hKID, gene symbol AQP2L) with homology to the aquaporins was isolated from a human kidney cDNA library. The longest open reading frame of 846 bp encoded a 282-amino-acid hydrophobic protein that contained the conserved NPA motifs of MIP family members. Cell-free translation produced a non...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0396

    authors: Ma T,Yang B,Kuo WL,Verkman AS

    更新日期:1996-08-01 00:00:00

  • Molecular cloning and characterization of a novel human CC chemokine, SCYA26.

    abstract::By searching the Expressed Sequence Tag database, a full-length cDNA for a novel human CC chemokine was cloned. This cDNA encoded a 94-amino-acid protein with a putative signal peptide of 26 amino acids. The deduced mature protein had the four conserved cysteine residues characteristic of CC chemokines and showed 44% ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1999.5837

    authors: Guo RF,Ward PA,Hu SM,McDuffie JE,Huber-Lang M,Shi MM

    更新日期:1999-06-15 00:00:00

  • Linkage mapping of human polymorphic proteins identified by two-dimensional electrophoresis.

    abstract::Nineteen polymorphic lymphocyte proteins were previously detected by two-dimensional protein electrophoresis (2DE). In this report, we describe the genetic linkage mapping of six of these polymorphic proteins (PNIA1-PNIA6), the identification by genetic linkage of a seventh (glyoxalase 1 on 6p21), and support for the ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(91)90010-c

    authors: Goldman D,O'Brien SJ,Lucas-Derse S,Dean M

    更新日期:1991-12-01 00:00:00

  • Cloning, sequencing, gene organization, and localization of the human ribosomal protein RPL23A gene.

    abstract::The intron-containing gene for human ribosomal protein RPL23A has been cloned, sequenced, and localized. The gene is approximately 4.0 kb in length and contains five exons and four introns. All splice sites exactly match the AG/GT consensus rule. The transcript is about 0.6 kb and is detected in all tissues examined. ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.5038

    authors: Fan W,Christensen M,Eichler E,Zhang X,Lennon G

    更新日期:1997-12-01 00:00:00