Comment on "Comparative genomic analysis of the whale (Pseudorca crassidens) PRNP locus".

abstract：:A DNA sequence, pOs6.20, was cloned from the nuclear genome of cultivated rice (Oryza sativa L.) by hybridization with a human minisatellite sequence. At high hybridization stringency, a subfragment of the rice sequence, pOs6.20.3, detected low-copy restriction fragment length polymorphisms (RFLPs), which behaved as M...

journal_title：Genome

authors： Dallas JF,McIntyre CL,Gustafson JP

更新日期：1993-06-01 00:00:00

abstract：:TBP (tubulin-based polymorphism) is a new molecular marker based tool that relies on the presence of intron-specific DNA polymorphisms of the plant beta-tubulin gene family. The multifunctional and essential role of the tubulin proteins is reflected in the conservation of regions within their primary amino acid sequen...

journal_title：Genome

authors： Bardini M,Lee D,Donini P,Mariani A,Gianì S,Toschi M,Lowe C,Breviario D

更新日期：2004-04-01 00:00:00

abstract：:Wide hybrids have been used in generating genetic maps of many plant species. In this study, genetic and physical mapping was performed on ph1b-induced recombinants of rye chromosome 2R in wheat (Triticum aestivum L.). All recombinants were single breakpoint translocations. Recombination 2RS-2BS was absent from the te...

journal_title：Genome

authors： Lukaszewski AJ,Rybka K,Korzun V,Malyshev SV,Lapinski B,Whitkus R

更新日期：2004-02-01 00:00:00

abstract：:Species of the Chironomus plumosus group display significant differences in their amount of centromeric heterochromatin. A tandem-repetitive satellite-like DNA has been isolated from C. plumosus. This DNA accounts for a major part of the centromeric heterochromatin. The DNA element has a Sau3AI restriction site ("Sau ...

journal_title：Genome

authors： Hankeln T,Fillippova MA,Kiknadze II,Aimanova KG,Schmidt ER

更新日期：1994-12-01 00:00:00

abstract：:Species of the genus Lilium are well known for their large genomes. Although expansion of noncoding repeated DNA is believed to account for this genome size, retroelement del Ty3-gypsy is the only one described so far in the genus Lilium. We isolated Ty1-copia elements from Lilium longiflorum and named them LIREs (lil...

journal_title：Genome

authors： Lee SI,Park KC,Son JH,Hwang YJ,Lim KB,Song YS,Kim JH,Kim NS

更新日期：2013-09-01 00:00:00

abstract：:Lasiodiplodia theobromae (Pat.) Griffon & Maubl., a member of the family Botryosphaeriaceae, is becoming a significant threat to crops and woody plants in many parts of the world, including the major cacao growing areas. While attempting to isolate Ceratobasidium theobromae, a causal agent of vascular streak dieback (...

journal_title：Genome

authors： Ali SS,Asman A,Shao J,Balidion JF,Strem MD,Puig AS,Meinhardt LW,Bailey BA

更新日期：2020-01-01 00:00:00

abstract：:The genus Alstroemeria contains species with large genomes (2C = 36.5-78.9 pg (17,600-38,000 Mb) in those species with 2n = 2x = 16). We investigated the diversity and genomic and chromosomal organisation of Ty1-copia-like retrotransposons in four Alstroemeria species. Analysis of 33 PCR-amplified sequences correspond...

journal_title：Genome

authors： Kuipers AG,Heslop-Harrison JS,Jacobsen E

更新日期：1998-06-01 00:00:00

abstract：:Our goal was to purify and characterize the allelic variants H1b1 and H1b2 of histone H1.b, one of the seven subtypes of this linker histone extracted from Japanese quail erythrocyte nuclei. These variants are revealed phenotypically as band H1.3 or part of band H1.4 by polyacrylamide gel electrophoresis (PAGE) in sod...

journal_title：Genome

authors： Pałyga J,Neelin JM

更新日期：1998-10-01 00:00:00

abstract：:The DOPA decarboxylase gene (Ddc) belongs to the "early-late" class of ecdysone-inducible genes in Drosophila melanogaster. Its expression is up-regulated in epidermal tissues by the ecdysone receptor acting through a response element, EcRE. In this paper, we show that another member of the nuclear receptor superfamil...

journal_title：Genome

authors： Davis MM,Yang P,Chen L,O'Keefe SL,Hodgetts RB

更新日期：2007-11-01 00:00:00

abstract：:Somatic karyotypes of the nine annual species of Cicer (2n = 16) were analyzed using C-banding. Highly significant differences in haploid genome length and C-band positive heterochromatin content were observed. The haploid genome length ranged from 20.0 μm in the wild species C. judaicum to 28.7 μm in the cultiv...

journal_title：Genome

authors： Tayyar RI,Lukaszewski AJ,Waines JG

更新日期：1994-08-01 00:00:00

abstract：:Five nonallelic copies of the dispersed (GATA)n repeated sequence of Drosophila melanogaster (referred to as GATA elements) have been sequenced and analysed. The GATA elements range in size from 111 to 444 bp, consisting predominantly of tandemly repeated GATAs, interspersed with variants of the subunit. The types and...

journal_title：Genome

authors： Simpson PR

更新日期：1990-10-01 00:00:00

abstract：:The 5S rRNA genes in the Camellia sinensis (L.) O. Kuntze (tea) genome are arranged as tandem repeat units of 300 and 325 bps. The 2 classes of tandem repeats were discovered by Southern hybridisation of tea genomic DNA with a 5S rRNA gene PCR product. ...

journal_title：Genome

authors： Singh D,Singh M

更新日期：2001-02-01 00:00:00

abstract：:A novel population consisted of a set of 99 near isogenic lines (NILs) and backcross recombinant inbred lines (BCRILs) derived from a cross between the cultivated tomato Lycopersicon esculentum cv. E6206 and L. hirsutum accession LA1777 is presented. Most of the lines contain a single defined introgression from L. hir...

journal_title：Genome

authors： Monforte AJ,Tanksley SD

更新日期：2000-10-01 00:00:00

abstract：:Disease lesion mimics provide an excellent biological system to study the genetic basis of cell death in plants. Many lesion mimics show variation in phenotype expression in different genetic backgrounds. Our goal was to identify quantitative trait loci (QTL) modifying lesion mimic expression thereby identifying genet...

journal_title：Genome

authors： Penning BW,Johal GS,McMullen MD

更新日期：2004-10-01 00:00:00

abstract：:The use of consensus chloroplast microsatellites primers for dicotyledonous chloroplast genomes revealed the existence of intra and interspecific length variation within the genus Vitis. Three chloroplast microsatellite loci were found to be polymorphic in samples of Vitis vinifera, Vitis berlandieri, Vitis riparia, a...

journal_title：Genome

authors： Arroyo-García R,Lefort F,de Andrés MT,Ibáñaez J,Borrego J,Jouve N,Cabello F,Martínez-Zapater JM

更新日期：2002-12-01 00:00:00

abstract：:Genetic variation in Gir cattle (Bos indicus) has so far not been well characterized. In this study, we used whole genome sequencing of three Gir bulls and a pooled sample from another 11 bulls to identify polymorphisms and loci under selection. A total of 9 990 733 single nucleotide polymorphisms (SNPs) and 604 308 i...

journal_title：Genome

authors： Liao X,Peng F,Forni S,McLaren D,Plastow G,Stothard P

更新日期：2013-10-01 00:00:00

abstract：:To clarify the phylogenetic relationships of Carthamus species, we performed sequence analysis of the nuclear stearoyl acyl carrier protein desaturase (SACPD) gene and the chloroplast intergenic spacer region between leucine and phenylalanine tRNA genes (trnL-trnF IGS) in 13 taxa of Carthamus. The previous division of...

journal_title：Genome

authors： Sasanuma T,Sehgal D,Sasakuma T,Raina SN

更新日期：2008-09-01 00:00:00

abstract：:Polymerase chain reaction was used, with single 10-mer primers of arbitrary sequence, to amplify random regions of genomic DNA from a diploid cultivated alfalfa backcross population. Segregation of the random amplified polymorphic DNA (RAPD) fragments was analysed to determine if RAPD markers are suitable for use as g...

journal_title：Genome

authors： Echt CS,Erdahl LA,McCoy TJ

更新日期：1992-02-01 00:00:00

abstract：:The ancestor of barley (Hordeum vulgare subsp. spontaneum) may be a source of novel alleles for crop improvement. We developed a set of recombinant chromosome substitution lines (RCSLs) using an accession of H. vulgare subsp. spontaneum (Caesarea 26-24, from Israel) as the donor and Hordeum vulgare subsp. vulgare 'Har...

journal_title：Genome

authors： Matus I,Corey A,Filichkin T,Hayes PM,Vales MI,Kling J,Riera-Lizarazu O,Sato K,Powell W,Waugh R

更新日期：2003-12-01 00:00:00

abstract：:Cadmium (Cd) is a nonessential heavy metal that is highly toxic to living cells at very low concentrations. Most of the Cd in plants derives from soils. Owing to the large amounts consumed, cereals are the major source of dietary Cd, and Cd content in oat can exceed accepted limits. Plants have a set of mechanisms tha...

journal_title：Genome

authors： Tanhuanpää P,Kalendar R,Schulman AH,Kiviharju E

更新日期：2007-06-01 00:00:00

abstract：:To gain insights into the structure and function of the wheat (Triticum aestivum L.) genomes, we identified 278 ESTs related to abiotic stress (cold, heat, drought, salinity, and aluminum) from 7671 ESTs previously mapped to wheat chromosomes. Of the 278 abiotic stress related ESTs, 259 (811 loci) were assigned to chr...

journal_title：Genome

authors： Ramalingam J,Pathan MS,Feril O,Miftahudin.,Ross K,Ma XF,Mahmoud AA,Layton J,Rodriguez-Milla MA,Chikmawati T,Valliyodan B,Skinner R,Matthews DE,Gustafson JP,Nguyen HT

更新日期：2006-10-01 00:00:00

abstract：:Oilseed rape (Brassica napus) is an allotetraploid species consisting of two genomes, derived from B. rapa (A genome) and B. oleracea (C genome). The presence of these two genomes makes single nucleotide polymorphism (SNP) marker identification and SNP analysis more challenging than in diploid species, as for a given ...

journal_title：Genome

authors： Durstewitz G,Polley A,Plieske J,Luerssen H,Graner EM,Wieseke R,Ganal MW

更新日期：2010-11-01 00:00:00

abstract：:Some aspects of Wright's great contribution to quantitative genetics and animal breeding are reviewed in relation to current research and practice. Particular aspects discussed are as follows: the utility of his definition of inbreeding coefficient in terms of the correlation of uniting gametes; the maintenance of gen...

journal_title：Genome

authors： Hill WG

更新日期：1989-01-01 00:00:00

abstract：:We have used a PCR and cloning strategy to identify Ty1-copia-like retrotransposons in tomato, Lycopersicon esculentum Mill. Using degenerate oligonucleotide primers corresponding to conserved domains of the Ty1-copia retrotransposon reverse transcriptase (RT), fragments of about 260 bp were obtained by PCR amplificat...

journal_title：Genome

authors： Rogers SA,Pauls KP

更新日期：2000-10-01 00:00:00

abstract：:Understanding the medical, economic, and ecological importance of black flies relies on correct identification of species. However, traditional taxonomy of black flies is impeded by a high degree of morphological uniformity, especially the presence of cryptic biodiversity, historically recognized by details of chromos...

journal_title：Genome

authors： Pramual P,Wongpakam K,Adler PH

更新日期：2011-01-01 00:00:00

abstract：:Natural selection and domestication have shaped modern horse populations, resulting in a vast range of phenotypically diverse breeds. Horse breeds are classified into three types (pony, light, and draft) generally based on their body type. Understanding the genetic basis of horse type variation and selective pressures...

journal_title：Genome

authors： Salek Ardestani S,Aminafshar M,Zandi Baghche Maryam MB,Banabazi MH,Sargolzaei M,Miar Y

更新日期：2020-08-01 00:00:00

abstract：:Intermediate wheatgrass (Thinopyrum intermedium (Host) Barkworth & D.R. Dewey), a segmental autoallohexaploid (2n = 6x = 42), is not only an important forage crop but also a valuable gene reservoir for wheat (Triticum aestivum L.) improvement. Throughout the scientific literature, there continues to be disagreement as...

journal_title：Genome

authors： Wang RR,Larson SR,Jensen KB,Bushman BS,DeHaan LR,Wang S,Yan X

更新日期：2015-02-01 00:00:00

abstract：:Segregation patterns of polymorphic simple sequence repeat (SSR) primer pairs were investigated in monoploid potato families derived from anther culture. A total of 14 primers developed from the sequences in the database, as well as from a genomic library of potato, was used. Distorted segregation was observed for sev...

journal_title：Genome

authors： Chani E,Ashkenazi V,Hillel J,Veilleux RE

更新日期：2002-04-01 00:00:00

abstract：:Hordeum vulgare subsp. spontaneum, the wild progenitor of barley, is a potential source of useful genetic variation for barley breeding programs. The objective of this study was to map quantitative trait loci (QTLs) in an advanced backcross population of barley. A total of 207 BC3 lines were developed using the 2-rowe...

journal_title：Genome

authors： Li JZ,Huang XQ,Heinrichs F,Ganal MW,Röder MS

更新日期：2006-05-01 00:00:00

abstract：:Gene segregation at six protein loci was analysed in progeny from tetraploid males and females obtained by suppression of first mitosis. The triploid full-sib families from five tetraploid males and the diploid gynogenetic lines from four tetraploid females were examined. The proportions of heterozygous gametes (0.83 ...

journal_title：Genome

authors： Diter A,Guyomard R,Chourrout D

更新日期：1988-08-01 00:00:00