Signatures of selection analysis using whole-genome sequence data reveals novel candidate genes for pony and light horse types.

abstract：:Using contiguous genomic DNA sequences of Arabidopsis thaliana, we were able to identify a region of conserved structure in the genome of rice. The conserved, and presumptive homoeologous segments, are 194 kb and 219-300 kb in size in Arabidopsis and rice, respectively. They contain five homologous genes, distinguishe...

journal_title：Genome

authors： van Dodeweerd AM,Hall CR,Bent EG,Johnson SJ,Bevan MW,Bancroft I

更新日期：1999-10-01 00:00:00

abstract：:An interspecific Gossypium hirsutum x Gossypium barbadense backcross population of 75 BC1 plants was evaluated for 1014 markers. The map consists of 888 loci, including 465 AFLPs, 229 SSRs, 192 RFLPs, and 2 morphological markers, ordered in 37 linkage groups that represent most if not all of the 26 chromosomes, altoge...

journal_title：Genome

authors： Lacape JM,Nguyen TB,Thibivilliers S,Bojinov B,Courtois B,Cantrell RG,Burr B,Hau B

更新日期：2003-08-01 00:00:00

abstract：:Rhubarb (official Da-huang) is an important medicinal herb in Asia. Many adulterants of official Da-huang have been discovered in Chinese markets in recent years, which has resulted in adverse effects in medicinal treatment. Here, novel molecular markers based on a short maturase K (matK) gene were developed for authe...

journal_title：Genome

authors： Xu G,Wang X,Liu C,Li W,Wei S,Liu Y,Cheng X,Liu J

更新日期：2013-02-01 00:00:00

abstract：:Disease resistance gene candidates (RGCs) belonging to the nucleotide-binding site (NBS) superfamily have been cloned from numerous crop plants using highly conserved DNA sequence motifs. The aims of this research were to (i) isolate genomic DNA clones for RGCs in cultivated sunflower (Helianthus annuus L.) and (ii) m...

journal_title：Genome

authors： Gedil MA,Slabaugh MB,Berry S,Johnson R,Michelmore R,Miller J,Gulya T,Knapp SJ

更新日期：2001-04-01 00:00:00

abstract：:Quantitative trait loci (QTL) controlling traits associated with winterhardiness in barley (field survival, LT50, growth habit, and crown fructan content) were mapped to chromosome 7 in a population of 100 F1-derived doubled haploid lines. The largest QTL effects for all traits were detected in a 21% recombination int...

journal_title：Genome

authors： Hayes PM,Blake T,Chen TH,Tragoonrung S,Chen F,Pan A,Liu B

更新日期：1993-02-01 00:00:00

abstract：:We have developed 21 new microsatellites in the model diploid perennial species Fragaria vesca from an enriched genomic library developed using F. vesca 'Ruegen'. The transferability of the primer pairs to other Fragaria species was high; all 31 primer pairs produced amplicons in 3 accessions of the octoploid strawber...

journal_title：Genome

authors： Hadonou AM,Sargent DJ,Wilson F,James CM,Simpson DW

更新日期：2004-06-01 00:00:00

abstract：:Cuscuta is a widely distributed genus of holoparasitic plants. Holocentric chromosomes have been reported only in species of one of its subgenera (Cuscuta subg. Cuscuta). In this work, a representative of this subgenus, Cuscuta approximata, was investigated looking for its mitotic and meiotic chromosome behaviour and ...

journal_title：Genome

authors： Guerra M,García MA

更新日期：2004-02-01 00:00:00

abstract：:Abstract: Comparative genomic hybridization (CGH) with a probe mixture of differently labeled genomic DNA from females and males highlighted the W chromosomes in mitotic plates and the W chromatin in polyploid interphase nuclei of the silkworm Bombyx mori, the flour moth Ephestia kuehniella, and the wax moth Galleria ...

journal_title：Genome

authors： Sahara K,Marec F,Eickhoff U,Traut W

更新日期：2003-04-01 00:00:00

abstract：:Digestion of Rana graeca italica DNA with Asp 718I produces highly repetitive fragments of 281 and 385 bp that were cloned and sequenced. The shorter fragment corresponds to the unit repeat (RgiS1b) of a satellite DNA. The longer fragment was found to be part of a 494-bp repeat of another satellite DNA (RgiS1a) that w...

journal_title：Genome

authors： Cardone DE,Feliciello I,Marotta M,Rosati C,Chinali G

更新日期：1997-10-01 00:00:00

abstract：:The Queensland fruit fly, Bactrocera tryoni, like the Mediterranean fruit fly, Ceratitis capitata, has a diploid complement of 12 chromosomes, including five pairs of autosomes and a XX/XY sex chromosome pair. Characteristic features of each chromosome are described. Chromosomal homology between B. tryoni and C. capit...

journal_title：Genome

authors： Zhao JT,Frommer M,Sved JA,Zacharopoulou A

更新日期：1998-08-01 00:00:00

abstract：:This paper describes a series of winter wheat - winter barley disomic addition lines developed from hybrids between winter wheat line Triticum aestivum L. 'Martonvásári 9 kr1' and the German 2-rowed winter barley cultivar Hordeum vulgare L. 'Igri'. The barley chromosomes in a wheat background were identified from the ...

journal_title：Genome

authors： Szakács E,Molnár-Láng M

更新日期：2007-01-01 00:00:00

abstract：:Genetic diversity of 33 Elymus caninus accessions was investigated using isozyme, RAPD, and microsatellite markers. The three assays differed in the amount of polymorphism detected. Microsatellites detected the highest polymorphism. Six microsatellite primer pairs generated a total of 74 polymorphic bands (alleles), w...

journal_title：Genome

authors： Sun GL,Díaz O,Salomon B,von Bothmer R

更新日期：1999-06-01 00:00:00

abstract：:Among 15 wild perennial species of the genus Glycine Willd. subgenus Glycine, G. tomentella is exceptional. It is composed of four cytotypes (2n = 38, 40, 78, 80), is diverse in morphological features, and covers a wide geographical area. The objectives of this study were to uncover the genomic diversity in 78- and 80...

journal_title：Genome

authors： Kollipara KP,Singh RJ,Hymowitz T

更新日期：1994-06-01 00:00:00

abstract：:Genotyping-by-sequencing (GBS) is a rapid, flexible, low-cost, and robust genotyping method that simultaneously discovers variants and calls genotypes within a broad range of samples. These characteristics make GBS an excellent tool for many applications and research questions from conservation biology to functional g...

journal_title：Genome

authors： Torkamaneh D,Laroche J,Belzile F

更新日期：2020-11-01 00:00:00

abstract：:Molecular genetics is becoming an important tool in the breeding and selection of agronomically important traits. BN28 is a low temperature induced gene in Brassicaceae species. PCR and Southern blot analysis indicate that BN28 is polymorphic in the three diploid genomes: Brassica rapa (AA), Brassica nigra (BB), and B...

journal_title：Genome

authors： Hawkins GP,Nykiforuk CL,Johnson-Flanagan AM,Boothe JG

更新日期：1996-08-01 00:00:00

abstract：:A key breeding objective in oat (Avena sativa L.) is cultivars with high and low beta-glucan content. In a targeted strategy to develop PCR-based markers linked to published beta-glucan content quantitative trait loci (QTLs) regions, 15 random amplified polymorphic DNA (RAPD) fragments were cloned and their sequences ...

journal_title：Genome

authors： Orr W,Molnar SJ

更新日期：2008-06-01 00:00:00

abstract：:The evolution of Drosophila subobscura mitochondrial DNA has been studied in experimental populations, founded with flies from a natural population from Calvià (Majorca, Balearic Islands, Spain). This population, like others founded in Europe, is characterized by the presence of 2 very common (>95%) mitochondrial hapl...

journal_title：Genome

authors： Oliver P,Balanyà J,Ramon MM,Picornell A,Serra L,Moya A,Castro JA

更新日期：2005-12-01 00:00:00

abstract：:Wide hybrids have been used in generating genetic maps of many plant species. In this study, genetic and physical mapping was performed on ph1b-induced recombinants of rye chromosome 2R in wheat (Triticum aestivum L.). All recombinants were single breakpoint translocations. Recombination 2RS-2BS was absent from the te...

journal_title：Genome

authors： Lukaszewski AJ,Rybka K,Korzun V,Malyshev SV,Lapinski B,Whitkus R

更新日期：2004-02-01 00:00:00

abstract：:Understanding the medical, economic, and ecological importance of black flies relies on correct identification of species. However, traditional taxonomy of black flies is impeded by a high degree of morphological uniformity, especially the presence of cryptic biodiversity, historically recognized by details of chromos...

journal_title：Genome

authors： Pramual P,Wongpakam K,Adler PH

更新日期：2011-01-01 00:00:00

abstract：:The aplocheiloid killifish Rivulus marmoratus is the only known self-fertilizing hermaphroditic vertebrate. Most natural populations consist almost entirely of hermaphrodites and comprise arrays of homozygous clones. However, in almost all populations thus far studied, clonal variation, as detected with molecular tech...

journal_title：Genome

authors： Sola L,Marzovillo M,Rossi AR,Gornung E,Bressanello S,Turner BJ

更新日期：1997-12-01 00:00:00

abstract：:The early life-history stages of fishes are poorly known, impeding acquisition of the identifications needed to monitor larval recruitment and year-class strength. A comprehensive database of COI sequences, linked to authoritatively identified voucher specimens, promises to change this situation, representing a signif...

journal_title：Genome

authors： Steinke D,Connell AD,Hebert PD

更新日期：2016-11-01 00:00:00

abstract：:GATA-GACA repetitive sequences first isolated from a female snake (termed BKm sequences) and associated with sex chromosomes in some species were hybridized to DNA from rainbow trout (Salmo gairdneri). Genomic DNA was studied from three groups of rainbow trout: (i) randomly selected males and females from an outbred g...

journal_title：Genome

authors： Lloyd MA,Fields MJ,Thorgaard GH

更新日期：1989-10-01 00:00:00

abstract：:A mapping population of Paspalum simplex segregating for apomixis (asexual reproduction through seeds) was screened with AFLPs to find apomixis-linked markers. Four AFLPs linked to apomixis in coupling phase were found. Three of them did not show recombinants among the 87 individuals of the mapping population, whereas...

journal_title：Genome

authors： Labombarda P,Busti A,Caceres ME,Pupilli F,Arcioni S

更新日期：2002-06-01 00:00:00

abstract：:Differences in genome size and gene content are among the most important signatures of microbial adaptation and genome evolution. Here, we investigated the patterns of genome variation among 10 natural strains of the symbiotic nitrogen-fixing bacterium Sinorhizobium meliloti, using pulse field gel electrophoresis (PFG...

journal_title：Genome

authors： Guo H,Sun S,Eardly B,Finan T,Xu J

更新日期：2009-10-01 00:00:00

abstract：:Carrot (Daucus carota L.) chromosomes are small and poorly differentiated in size and morphology. Here we demonstrate that fluorescent in situ hybridization (FISH) signals derived from arbitrary PCR probes can be used for chromosome identification in carrot. To prepare probes, we searched for nonpolymorphic products a...

journal_title：Genome

authors： Nowicka A,Grzebelus E,Grzebelus D

更新日期：2012-03-01 00:00:00

abstract：:cis-Elements CArG bound by serum response factor (SRF) are presently being intensively studied, but little is known about the substitution pattern of functional CArG elements. Here, we have performed the first evolutionary analysis of CArGome in the human and mouse genome through bioinformatic methods and statistical ...

journal_title：Genome

authors： Shen X,Mao H,Miao S

更新日期：2011-02-01 00:00:00

abstract：:Elymus L. is the largest and most complex genus in the Triticeae tribe of grasses with approximately 150 polyploid perennial species occurring worldwide. We report here the first genetic linkage map for Elymus. Backcross mapping populations were created by crossing caespitose Elymus wawawaiensis (EW) (Snake River whea...

journal_title：Genome

authors： Mott IW,Larson SR,Jones TA,Robins JG,Jensen KB,Peel MD

更新日期：2011-10-01 00:00:00

abstract：:The 5S rDNA repeat unit of the cockle Cerastoderma glaucum from the Mediterranean and Baltic coasts was PCR amplified and sequenced. The length of the units was 539-568 bp, of which 120 bp were assigned to the 5S rRNA gene and 419-448 bp to the spacer region, and the G/C content was 46%-49%, 54%, and 44%-47%, respecti...

journal_title：Genome

authors： Freire R,Insua A,Méndez J

更新日期：2005-06-01 00:00:00

abstract：:An Aegilops ventricosa Tausch (2n = 28, DvDvNvNv) subtelocentric chromosome added to wheat (Triticum aestivum L.) in a disomic addition line was found to carry the genes for resistance Yr17, Lr37, Sr38, and Cre5 already transferred onto chromosome 2AS of the wheat line VPM1. Previous works demonstrated that this Ae. v...

journal_title：Genome

authors： Tanguy AM,Coriton O,Abélard P,Dedryver F,Jahier J

更新日期：2005-06-01 00:00:00

abstract：:In pseudo-arrhenotokous mites, haploid males develop from fertilized eggs that undergo paternal genome loss (PGL) during early embryogenesis. We present evidence that some of the paternal genome may be retained in males of the predatory mite Typhlodromus pyri Scheuten (Acari: Phytoseiidae). Two reproductively compatib...

journal_title：Genome

authors： Perrot-Minnot MJ,Navajas M

更新日期：1995-10-01 00:00:00