Identification and analysis of homoeologous segments of the genomes of rice and Arabidopsis thaliana.

Abstract:

:Using contiguous genomic DNA sequences of Arabidopsis thaliana, we were able to identify a region of conserved structure in the genome of rice. The conserved, and presumptive homoeologous segments, are 194 kb and 219-300 kb in size in Arabidopsis and rice, respectively. They contain five homologous genes, distinguished in order by a single inversion. These represent the first homoeologous segments identified in the genomes of a dicot and a monocot, demonstrating that fine-scale conservation of genome structure exists and is detectable across this major divide in the angiosperms. The conserved framework of genes identified is interspersed with non-conserved genes, indicating that mechanisms beyond segmental inversions and translocations need to be invoked to fully explain plant genome evolution, and that the benefits of comparative genomics over such large taxonomic distances may be limited.

journal_name

Genome

journal_title

Genome

authors

van Dodeweerd AM,Hall CR,Bent EG,Johnson SJ,Bevan MW,Bancroft I

subject

Has Abstract

pub_date

1999-10-01 00:00:00

pages

887-92

issue

5

eissn

0831-2796

issn

1480-3321

journal_volume

42

pub_type

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