SNP discovery by amplicon sequencing and multiplex SNP genotyping in the allopolyploid species Brassica napus.

abstract：:Conceptual aspects of estimation of genetic components of variance and covariance under selection are discussed, with special attention to likelihood methods. Certain selection processes are described and alternative likelihoods that can be used for analysis are specified. There is a mathematical relationship between ...

journal_title：Genome

authors： Gianola D,Fernando RL,Im S,Foulley JL

更新日期：1989-01-01 00:00:00

abstract：:Segregation patterns of polymorphic simple sequence repeat (SSR) primer pairs were investigated in monoploid potato families derived from anther culture. A total of 14 primers developed from the sequences in the database, as well as from a genomic library of potato, was used. Distorted segregation was observed for sev...

journal_title：Genome

authors： Chani E,Ashkenazi V,Hillel J,Veilleux RE

更新日期：2002-04-01 00:00:00

abstract：:The first SSR-based genetic linkage map of Cucurbita moschata was created by integrating the maps of two F2 populations with one common parent developed from the crosses Waltham Butternut (WB) x Nigerian Local (NL) and ZHOU (a hull-less type) x WB. The integrated C. moschata map comprises 205 SSR markers and two morph...

journal_title：Genome

authors： Gong L,Pachner M,Kalai K,Lelley T

更新日期：2008-11-01 00:00:00

abstract：:Thirty-four polymorphic simple-sequence repeats (SSRs) were evaluated for length polymorphism in melon (Cucumis melo L.) and cucumber (Cucumis sativus L.). SSR markers were located on three melon maps (18 on the map of 'Vedrantais' and PI 161375, 23 on the map of 'Piel de Sapo' and PI 161375, and 16 on the map of PI 4...

journal_title：Genome

authors： Danin-Poleg Y,Reis N,Baudracco-Arnas S,Pitrat M,Staub JE,Oliver M,Arus P,deVicente CM,Katzir N

更新日期：2000-12-01 00:00:00

abstract：:The "rings" belonging to the genus Ypthima are amongst the most common butterflies in Peninsular Malaysia. However, the species can be difficult to tell apart, with keys relying on minor and often non-discrete ring characters found on the hindwing. Seven species have been reported from Peninsular Malaysia, but this is...

journal_title：Genome

authors： Jisming-See SW,Sing KW,Wilson JJ

更新日期：2016-10-01 00:00:00

abstract：:Using contiguous genomic DNA sequences of Arabidopsis thaliana, we were able to identify a region of conserved structure in the genome of rice. The conserved, and presumptive homoeologous segments, are 194 kb and 219-300 kb in size in Arabidopsis and rice, respectively. They contain five homologous genes, distinguishe...

journal_title：Genome

authors： van Dodeweerd AM,Hall CR,Bent EG,Johnson SJ,Bevan MW,Bancroft I

更新日期：1999-10-01 00:00:00

abstract：:Five nonallelic copies of the dispersed (GATA)n repeated sequence of Drosophila melanogaster (referred to as GATA elements) have been sequenced and analysed. The GATA elements range in size from 111 to 444 bp, consisting predominantly of tandemly repeated GATAs, interspersed with variants of the subunit. The types and...

journal_title：Genome

authors： Simpson PR

更新日期：1990-10-01 00:00:00

abstract：:Phyllomys (Echimyidae, Rodentia) is a genus of Neotropical rodents with available cytogenetic data restricted to six out of 13 species, mainly based on simple staining methods, without detailed analyses. In this work, we present new karyotypes for Phyllomys lamarum (diploid number 2n = 56, fundamental number or number...

journal_title：Genome

authors： Araújo NP,Loss AC,Cordeiro-Junior DA,da Silva KR,Leite YL,Svartman M

更新日期：2014-01-01 00:00:00

abstract：:2B rye plants selected for high (H) or low (L) B transmission rate were studied at pachytene and metaphase I of meiosis to determine the relationship between synapsis, bivalents at metaphase I, and B transmission rate. The results show that the 2 B chromosomes (Bs) form bivalents at pachytene in both the H and L lines...

journal_title：Genome

authors： Jiménez G,Manzanero S,Puertas MJ

更新日期：2000-04-01 00:00:00

abstract：:A new repetitive sequence that is extremely abundant and well dispersed in the Thinopyrum elongatum genome but present in low-copy number in wheat (Triticum aestivum L.) has been isolated. This repeat and a Th. elongatum repeat isolated in another laboratory were used to identify cosmid genomic clones containing the r...

journal_title：Genome

authors： Bournival B,Obanni M,Abad A,Ohm H,Mackenzie S

更新日期：1994-02-01 00:00:00

abstract：:A novel y-type high molecular weight (HMW) glutenin subunit gene from the G genome of Triticum timopheevi (2n=4x=28, AAGG) was isolated and characterized. Genomic DNA from accession CWI17006 was amplified and a 2200 bp fragment was obtained. Sequence analysis revealed a complete open reading frame including N- and C-t...

journal_title：Genome

authors： Li X,Zhang Y,Gao L,Wang A,Ji K,He Z,Appels R,Ma W,Yan Y

更新日期：2007-12-01 00:00:00

abstract：:Knowledge of the inheritance of C-glycosyl flavone synthesis in maize (Zea mays L.) silk tissues has been acquired through detailed genetic studies involving primarily germplasm from the Corn Belt Dent race. To test the robustness of this genetic knowledge, we examined C-glycosyl flavone synthesis in a genetically dis...

journal_title：Genome

authors： Lee EA,Staebler JM,Grainger C,Snook ME

更新日期：2009-01-01 00:00:00

abstract：:Complex chromosome rearrangements (CCRs) are defined as structural abnormalities involving more than two chromosome breaks, coupled with exchanges of chromosomal segments. Information on CCRs in plants is limited. In the present study, a plant (26-4) harboring translocation chromosomes 1RS.1BL and 4RS.4DL was selected...

journal_title：Genome

authors： Ren T,Li Z,Yan B,Tan F,Tang Z,Fu S,Yang M,Ren Z

更新日期：2016-12-01 00:00:00

abstract：:The present study constitutes the first attempt to construct a photographic map of the polytene chromosomes of Dacus oleae, a pest of the olive tree that causes serious financial damage in all olive oil producing countries. The map was constructed by using the larval fat body cells, the chromosomes of which are repres...

journal_title：Genome

authors： Mavragani-Tsipidou P,Karamanlidou G,Zacharopoulou A,Koliais S,Kastritisis C

更新日期：1992-06-01 00:00:00

abstract：:Thermosensitive genic male-sterile (TGMS) rice is widely used in hybrid rice production. Because of its specific temperature requirement, it can be used only in a narrow rice-growing zone in Asia. A newly discovered TGMS line, G20S, has an opposite phenotype compared with normal TGMS lines. G20S is completely sterile ...

journal_title：Genome

authors： Liu X,Li X,Zhang X,Wang S

更新日期：2010-02-01 00:00:00

abstract：:During germ line-soma differentiation in early syncytial embryonic development of the chironomid Acricotopus lucidus, a complement of supernumerary chromosomes, the so-called germ line limited chromosomes (Ks), is excluded from the future somatic nuclei in the course of elimination mitoses. The Ks lag behind in the eq...

journal_title：Genome

authors： Staiber W

更新日期：2006-03-01 00:00:00

abstract：:A novel population consisted of a set of 99 near isogenic lines (NILs) and backcross recombinant inbred lines (BCRILs) derived from a cross between the cultivated tomato Lycopersicon esculentum cv. E6206 and L. hirsutum accession LA1777 is presented. Most of the lines contain a single defined introgression from L. hir...

journal_title：Genome

authors： Monforte AJ,Tanksley SD

更新日期：2000-10-01 00:00:00

abstract：:Digestion of Rana graeca italica DNA with Asp 718I produces highly repetitive fragments of 281 and 385 bp that were cloned and sequenced. The shorter fragment corresponds to the unit repeat (RgiS1b) of a satellite DNA. The longer fragment was found to be part of a 494-bp repeat of another satellite DNA (RgiS1a) that w...

journal_title：Genome

authors： Cardone DE,Feliciello I,Marotta M,Rosati C,Chinali G

更新日期：1997-10-01 00:00:00

abstract：:Lycopersicon esculentum (tomato) has a small genome (2C = 1.90 pg of DNA) packaged in 2n = 2x = 24 small acrocentric to metacentric chromosomes. Like the chromosomes of other members of the family Solanaceae, tomato chromosomes have pericentromeric heterochromatin. To determine the fraction of the tomato genome found ...

journal_title：Genome

authors： Peterson DG,Stack SM,Price HJ,Johnston JS

更新日期：1996-02-01 00:00:00

abstract：:The combination of two divergent genomes during hybridization can result in "genome shock". Although genome shock has been reported in the hybrids of some herbaceous plants, the pattern and the principle it follows are far from understood, especially in woody plants. Here, the gene expression patterns were remodeled i...

journal_title：Genome

authors： Zhang M,Liu XK,Fan W,Yan DF,Zhong NS,Gao JY,Zhang WJ

更新日期：2018-07-01 00:00:00

abstract：:The genus Cichorium consists of two widely cultivated species C. intybus (chicory) and C. endivia (endive) and four wild species, C. bottae, C. spinosum, C. calvum, and C. pumilum. A multivariate and an UPGMA (unweighted pair group method average) analysis based on AFLP (amplified fragment length polymorphism) markers...

journal_title：Genome

authors： Kiers AM,Mes TH,van der Meijden R,Bachmann K

更新日期：2000-06-01 00:00:00

abstract：:Hordeum vulgare subsp. spontaneum, the wild progenitor of barley, is a potential source of useful genetic variation for barley breeding programs. The objective of this study was to map quantitative trait loci (QTLs) in an advanced backcross population of barley. A total of 207 BC3 lines were developed using the 2-rowe...

journal_title：Genome

authors： Li JZ,Huang XQ,Heinrichs F,Ganal MW,Röder MS

更新日期：2006-05-01 00:00:00

abstract：:Cashew (Anacardium occidentale L.), introduced into India about 400 years ago, is distributed widely in the coastal regions as spontaneous populations as well as in cultivation. Despite the plant's commercial exploitation, little is known about its actual introduction and diversification. We attempted to construct the...

journal_title：Genome

authors： Archak S,Gaikwad AB,Swamy KR,Karihaloo JL

更新日期：2009-03-01 00:00:00

abstract：:B chromosome derivatives suffering from breaks within their centromere were examined cytologically and molecularly. We showed by high resolution FISH that misdivision of the centromere of a univalent chromosome can occur during meiosis. The breaks divide the centromere repeat sequence cluster. A telocentric chromosome...

journal_title：Genome

authors： Kaszás E,Kato A,Birchler JA

更新日期：2002-08-01 00:00:00

abstract：:We report the characterization of 3 new repetitive sequences from the bivalve mollusc Mytilus galloprovincialis, designated Mg1, Mg2, and Mg3, with monomer lengths of 169, 260, and 70 bp, respectively. The 3 repeats together constitute approximately 7.8% of the M. galloprovincialis genome and were found, together with...

journal_title：Genome

authors： Kourtidis A,Drosopoulou E,Pantzartzi CN,Chintiroglou CC,Scouras ZG

更新日期：2006-11-01 00:00:00

abstract：:Simple sequence repeats (SSRs) or microsatellites are very useful molecular markers, owing to their locus-specific codominant and multiallelic nature, high abundance in the genome, and high rates of transferability across species. The soybean aphid (Aphis glycines Matsumura) has become the most damaging insect pest of...

journal_title：Genome

authors： Jun TH,Michel AP,Mian MA

更新日期：2011-05-01 00:00:00

abstract：:After temperature elevation, the newly synthesized polypeptides from several Drosophila montium subgroup species, of the melanogaster species group, were analyzed in denaturing acrylamide gels. The pattern obtained is characteristic of the heat shock response already documented for many other Drosophila species, altho...

journal_title：Genome

authors： Konstantopoulou I,Drosopoulou E,Scouras ZG

更新日期：1997-02-01 00:00:00

abstract：:Mitochondrial (mt) genome sequences of insects are receiving renewed attention in molecular phylogentic studies, studies of mt-genome rearrangement, and other unusual molecular phenomena, such as translational frameshifting. At present, the basal neopteran lineages are poorly represented by mt-genome sequences. Comple...

journal_title：Genome

authors： Stewart JB,Beckenbach AT

更新日期：2006-07-01 00:00:00

abstract：:Variation in recombinant frequencies at two adjacent intervals on chromosome 6 of tomato (Lycopersicon esculentum Mill.) has been studied in seven lines that differ in the amount and origin of introgressed segments from wild species. These lines were all crossed to a genotype homozygous recessive for the markers tl, y...

journal_title：Genome

authors： Liharska T,Wordragen M,Kammen A,Zabel P,Koornneef M

更新日期：1996-06-01 00:00:00

abstract：:In the silkworm Bombyx mori, non-susceptibility to the Zhenjiang (China) strain of the densonucleosis virus (DNV-Z) is controlled by the recessive gene nsd-Z (non-susceptible to DNV-Z), which is located on chromosome 15. Owing to a lack of crossing over in females, reciprocal backcrossed F1 (BC1) progeny were used for...

journal_title：Genome

authors： Li M,Guo Q,Hou C,Miao X,Xu A,Guo X,Huang Y

更新日期：2006-04-01 00:00:00