Genome and transcriptome analysis of the latent pathogen Lasiodiplodia theobromae, an emerging threat to the cacao industry.

abstract：:Comparative mapping is an important component of map-based cloning in large-genome cereal species. We describe evidence of a segmental chromosomal duplication harbouring CONSTANS-like genes in barley that predates the divergence of the Oryzoideae (rice) and Pooideae (brachypodium, barley, wheat) clades, and discuss th...

journal_title：Genome

authors： Cockram J,Howells RM,O'Sullivan DM

更新日期：2010-03-01 00:00:00

abstract：:Light-harvesting-like (LIL) proteins are low-molecular-mass membrane proteins related to the light-harvesting complexes, which form the dominant antenna system in most photosynthetic eukaryotes. To analyze the LIL protein family, we mined a number of publicly available databases to identify members of this family in a...

journal_title：Genome

authors： Neilson JA,Durnford DG

更新日期：2010-01-01 00:00:00

abstract：:The growth hormone (GH) gene of teleost fish exhibits a higher degree of variability compared with other vertebrate groups. However, the different selective constraints at the sequence level are not well understood. In this study, maximum-likelihood (ML) models of codon substitutions were used to investigate Darwinian...

journal_title：Genome

authors： Ryynänen HJ,Primmer CR

更新日期：2006-01-01 00:00:00

abstract：:Alien cytoplasms cause a wide range of phenotypic alterations in the nucleus-cytoplasm (NC) hybrids in the Triticeae. Nuclear genomes of timopheevii wheat (Triticum timopheevii and Triticum araraticum) are fully compatible with the cytoplasm of Aegilops squarrosa, while those of a majority of emmer or durum wheat cult...

journal_title：Genome

authors： Asakura N,Nakamura C,Ohtsuka I

更新日期：1997-04-01 00:00:00

abstract：:Fluorescent in situ hybridization (FISH) of a 130 kilobase cotton (Gossypium hirsuitum L.) bacterial artificial chromosome (BAC) clone containing a high proportion of single-copy DNA produced a large pair of FISH signals on the distal end of the long arm of a pair of chromosomes of the D-genome species G. raimondii Ul...

journal_title：Genome

authors： Hanson RE,Zwick MS,Choi S,Islam-Faridi MN,McKnight TD,Wing RA,Price HJ,Stelly DM

更新日期：1995-08-01 00:00:00

abstract：:Carrot (Daucus carota L.) chromosomes are small and poorly differentiated in size and morphology. Here we demonstrate that fluorescent in situ hybridization (FISH) signals derived from arbitrary PCR probes can be used for chromosome identification in carrot. To prepare probes, we searched for nonpolymorphic products a...

journal_title：Genome

authors： Nowicka A,Grzebelus E,Grzebelus D

更新日期：2012-03-01 00:00:00

abstract：:Oilseed rape (Brassica napus) is an allotetraploid species consisting of two genomes, derived from B. rapa (A genome) and B. oleracea (C genome). The presence of these two genomes makes single nucleotide polymorphism (SNP) marker identification and SNP analysis more challenging than in diploid species, as for a given ...

journal_title：Genome

authors： Durstewitz G,Polley A,Plieske J,Luerssen H,Graner EM,Wieseke R,Ganal MW

更新日期：2010-11-01 00:00:00

abstract：:Lycopersicon esculentum (tomato) has a small genome (2C = 1.90 pg of DNA) packaged in 2n = 2x = 24 small acrocentric to metacentric chromosomes. Like the chromosomes of other members of the family Solanaceae, tomato chromosomes have pericentromeric heterochromatin. To determine the fraction of the tomato genome found ...

journal_title：Genome

authors： Peterson DG,Stack SM,Price HJ,Johnston JS

更新日期：1996-02-01 00:00:00

abstract：:The evolution of Drosophila subobscura mitochondrial DNA has been studied in experimental populations, founded with flies from a natural population from Calvià (Majorca, Balearic Islands, Spain). This population, like others founded in Europe, is characterized by the presence of 2 very common (>95%) mitochondrial hapl...

journal_title：Genome

authors： Oliver P,Balanyà J,Ramon MM,Picornell A,Serra L,Moya A,Castro JA

更新日期：2005-12-01 00:00:00

abstract：:The first quantitative trait locus (QTL) analysis of multiple agronomic traits in the model legume Lotus japonicus was performed with a population of recombinant inbred lines derived from Miyakojima MG-20 x Gifu B-129. Thirteen agronomic traits were evaluated in 2004 and 2005: traits of vegetative parts (plant height,...

journal_title：Genome

authors： Gondo T,Sato S,Okumura K,Tabata S,Akashi R,Isobe S

更新日期：2007-07-01 00:00:00

abstract：:Multiple reaction monitoring mass spectrometry (MRM-MS) is an emerging technology for blood biomarker verification and validation; however, the results may be influenced by pre-analytical factors. This exploratory study was designed to determine if differences in phlebotomy techniques would significantly affect the ab...

journal_title：Genome

authors： Penn AM,Lu L,Chambers AG,Balshaw RF,Morrison JL,Votova K,Wood E,Smith DS,Lesperance M,del Zoppo GJ,Borchers CH,SpecTRA Study Group.

更新日期：2015-12-01 00:00:00

abstract：:Brachypodium is well suited as a model system for temperate grasses because of its compact genome and a range of biological features. In an effort to develop resources for genome research in this emerging model species, we constructed 2 bacterial artificial chromosome (BAC) libraries from an inbred diploid Brachypodiu...

journal_title：Genome

authors： Huo N,Gu YQ,Lazo GR,Vogel JP,Coleman-Derr D,Luo MC,Thilmony R,Garvin DF,Anderson OD

更新日期：2006-09-01 00:00:00

abstract：:To gain insights into the structure and function of the wheat (Triticum aestivum L.) genomes, we identified 278 ESTs related to abiotic stress (cold, heat, drought, salinity, and aluminum) from 7671 ESTs previously mapped to wheat chromosomes. Of the 278 abiotic stress related ESTs, 259 (811 loci) were assigned to chr...

journal_title：Genome

authors： Ramalingam J,Pathan MS,Feril O,Miftahudin.,Ross K,Ma XF,Mahmoud AA,Layton J,Rodriguez-Milla MA,Chikmawati T,Valliyodan B,Skinner R,Matthews DE,Gustafson JP,Nguyen HT

更新日期：2006-10-01 00:00:00

abstract：:DNA gel-blot and in situ hybridization with genome-specific repeated sequences have proven to be valuable tools in analyzing genome structure and relationships in species with complex allopolyploid genomes such as hexaploid oat (Avena sativa L., 2n = 6x = 42; AACCDD genome). In this report, we describe a systematic ap...

journal_title：Genome

authors： Ananiev EV,Vales MI,Phillips RL,Rines HW

更新日期：2002-04-01 00:00:00

abstract：:Yams are species of the genus Dioscorea (family Dioscoreaceae), which consists of approximately 630 species. The majority of the world production of yams occurs in Africa with 58.8 million t annually, but they are also produced in the Americas and Asia. The saponins in yams have been reported to possess various proper...

journal_title：Genome

authors： Techen N,Parveen I,Khan IA

更新日期：2017-03-01 00:00:00

abstract：:A reminder that another paper on the cetacean PRNP locus has been published before Kim et al.'s paper (2008. Genome, 51: 452-464) is presented along with a consideration of the related results. ...

journal_title：Genome

authors： Acutis PL,Peletto S,Grego E,Colussi S,Riina MV,Rosati S,Mignone W,Caramelli M

更新日期：2008-12-01 00:00:00

abstract：:We investigated the 5S ribosomal RNA (rRNA) genes of the isopod crustacean Asellus aquaticus. Using PCR amplification, three different tandemly repeated units containing 5S rDNA were identified. Two of the three sequences were cloned and sequenced. One of them was 1842 bp and presented a 5S rRNA gene and a U1 small nu...

journal_title：Genome

authors： Pelliccia F,Barzotti R,Bucciarelli E,Rocchi A

更新日期：2001-06-01 00:00:00

abstract：:We have characterized a so-called D genome specific repetitive DNA sequence (pAs1) of Aegilops squarrosa L. (2n = 14, genome DD) with respect to its DNA sequence and its distribution among Triticeae species. The clone consisted of three units of a repetitive DNA sequence of 336 or 337 base pairs, and was AT rich (65.2...

journal_title：Genome

authors： Nagaki K,Tsujimoto H,Isono K,Sasakuma T

更新日期：1995-06-01 00:00:00

abstract：:Eighteen accessions of a diploid wild peanut species (Arachis duranensis) were analyzed using morphological, intercrossing, cytological, and RFLP data. Abundant variation was found for morphological characters and for RFLP patterns both between and within accessions, and each accession could be uniquely identified by ...

journal_title：Genome

authors： Stalker HT,Dhesi JS,Kochert G

更新日期：1995-12-01 00:00:00

abstract：:We have isolated and characterized microsatellites (simple sequence repeat (SSR) loci) from the silkworm genome. The screening of a partial genomic library by the conventional hybridization method led to the isolation of 28 microsatellites harbouring clones. The abundance of (CA)n repeats in the silkworm genome was ak...

journal_title：Genome

authors： Reddy KD,Abraham EG,Nagaraju J

更新日期：1999-12-01 00:00:00

abstract：:The 2C and 4C nuclear DNA amounts were estimated in eight diploid species, belonging to three diverse genera (Vicia, Tephrosia, and Phlox) and their corresponding colchitetraploids. In P. drummondii, T. purpurea, and T. oxygona tetraploids the deviation from the expectation was highly significant. The DNA in P. drummo...

journal_title：Genome

authors： Raina SN,Parida A,Koul KK,Salimath SS,Bisht MS,Raja V,Khoshoo TN

更新日期：1994-08-01 00:00:00

abstract：:Southern blots of restriction fragments of genomic DNAs from Hordeum vulgare (L.), H. bulbosum (L.), and interspecific hybrids and their derivatives were hybridized with rDNA probe to identify locus-specific modifications at Rrn loci. H. bulbosum rDNA revealed a single EcoRV site per repeat compared with two sites in ...

journal_title：Genome

authors： Kranthi Kumar P,Subrahmanyam NC

更新日期：1999-12-01 00:00:00

abstract：:Allopolyploids undergo 'genomic shock' leading to large genetic and epigenetic modifications. Previous studies mainly focused on nuclear changes, while little is known about the inheritance and changes of organelle genome in allopolyploidization. The synthetic allotetraploid Cucumis ×hytivus, which is generated via hy...

journal_title：Genome

authors： Zhai Y,Yu X,Zhou J,Li J,Tian Z,Wang P,Meng Y,Zhao Q,Lou Q,Du S,Chen J

更新日期：2021-01-18 00:00:00

abstract：:Mapping and sequencing the human genome will generate large amounts of data, which must be sorted, analyzed, and stored for rapid retrieval to complete this enormous task. Computers and their software programs provide the most important tool to the molecular biologist today. A discussion of current capabilities and fu...

journal_title：Genome

authors： Kelly MJ

更新日期：1989-01-01 00:00:00

abstract：:The NADH-specific and NAD(P)H-bispecific nitrate reductase genes from barley have been cloned and sequenced. To determine if the Nar7 locus encodes the NAD(P)H-bispecific nitrate reductase structural gene, a cross was made between a wild-type cultivar, Morex (Nar7 Nar7), and Az70 (nar7w nar7w), a mutant from the culti...

journal_title：Genome

authors： Warner RL,Kudrna DA,Kleinhofs A

更新日期：1995-08-01 00:00:00

abstract：:Restriction endonuclease TaqI has been known as a nonbanding restriction endonuclease when it is used on fixed human chromosomes. However, a specific TaqI digestion can be obtained after varying experimental conditions such as concentration of enzyme, time of incubation, and volume of the final reaction mixture. This ...

journal_title：Genome

authors： Tagarro I,González-Aguilera JJ,Fernández-Peralta AM

更新日期：1991-04-01 00:00:00

abstract：:Nine inbred mouse strains surveyed for erythrocytic guanosine-5'-triphosphate (GTP) concentration were found to segregate into two discrete groups. Strains having low GTP levels between 1.4 and 3.4 nmol/10(9) cells were C3H/HeJ, C3H/HeHa, A/J, and WB/ReJ. Strains having high GTP levels between 11.0 and 14.8 nmol/10(9)...

journal_title：Genome

authors： Jenuth JP,Fung E,Snyder FF

更新日期：1994-06-01 00:00:00

abstract：:The DNA sequencing and preliminary functional analysis of a 32 kb section of yeast chromosome I has been completed. This region lies on the left arm of the chromosome between the LTE1 and SPO7 genes and contains 14 open reading frames (ORFs) positioned closely together, with an average spacing of approximately 350 nuc...

journal_title：Genome

authors： Ouellette BF,Clark MW,Keng T,Storms RK,Zhong W,Zeng B,Fortin N,Delaney S,Barton A,Kaback DB

更新日期：1993-02-01 00:00:00

abstract：:Using contiguous genomic DNA sequences of Arabidopsis thaliana, we were able to identify a region of conserved structure in the genome of rice. The conserved, and presumptive homoeologous segments, are 194 kb and 219-300 kb in size in Arabidopsis and rice, respectively. They contain five homologous genes, distinguishe...

journal_title：Genome

authors： van Dodeweerd AM,Hall CR,Bent EG,Johnson SJ,Bevan MW,Bancroft I

更新日期：1999-10-01 00:00:00

abstract：:The 5S rDNA repeat unit of the cockle Cerastoderma glaucum from the Mediterranean and Baltic coasts was PCR amplified and sequenced. The length of the units was 539-568 bp, of which 120 bp were assigned to the 5S rRNA gene and 419-448 bp to the spacer region, and the G/C content was 46%-49%, 54%, and 44%-47%, respecti...

journal_title：Genome

authors： Freire R,Insua A,Méndez J

更新日期：2005-06-01 00:00:00