The characteristics and genome analysis of vB_ApiP_XC38, a novel phage infecting Acinetobacter pittii.

abstract：:Staphylococcus aureus is a well-known pathogen that causes several serious diseases in humans and animals. As part of the efforts to control this pathogen, a newly isolated bacteriophage, SA12, which specifically targets S. aureus, was characterized, and its genome was completely sequenced. Host range and bacteriophag...

journal_title：Virus genes

authors： Chang Y,Lee JH,Shin H,Heu S,Ryu S

更新日期：2013-10-01 00:00:00

abstract：:In this study, the relative synonymous codon usage (RSCU) values, effective number of codon (ENC) values, nucleotide contents, and dinucleotide were used to investigate codon usage pattern of each protein-coding gene and genome among 31 Newcastle disease virus (NDV) isolates. The result shows that the overall extent o...

journal_title：Virus genes

authors： Wang M,Liu YS,Zhou JH,Chen HT,Ma LN,Ding YZ,Liu WQ,Gu YX,Zhang J

更新日期：2011-04-01 00:00:00

abstract：:The nucleic acid and deduced amino acid sequence of the fibre gene of the HNF-61 strain of porcine adenovirus serotype 5 (PAdV-5) was determined and compared to that of the HNF-70 strain of the same serotype (Nagy et al., J Gen Virol 82, 525-529, 2001) and also to adenovirus fibre genes from the genera Mastadenovirus ...

journal_title：Virus genes

authors： Nagy M,Nagy E,Tuboly T

更新日期：2002-03-01 00:00:00

abstract：:India is endemic for foot-and-mouth disease (FMD) and in recent years a unique group within serotype A, carrying a codon deletion at an antigenically critical site in capsid protein VP3 has emerged (VP3(59)-deletion group). This tempted us to analyze the noncoding region, which is an under represented area, though cri...

journal_title：Virus genes

authors： Mohapatra JK,Sahu A,Barik SK,Sanyal A,Pattnaik B

更新日期：2009-08-01 00:00:00

abstract：:Recently, we reported that the frequency of hepatitis C virus (HCV) genotypes and subtypes has rapidly changed among intravenous drug users (IDUs) in Yunnan Province over the last 5 years; this is especially true for subtype 6a which has increased in frequency from 5 to 15%. Here, we assessed 120 HCV-positive plasma s...

journal_title：Virus genes

authors： Li Q,Yao Y,Shen Y,Cao D,Li Y,Zhang S,Cun W,Sun M,Yu J,Shi L,Dong S

更新日期：2017-04-01 00:00:00

abstract：:Adeno-associated virus (AAV) is a human parvovirus that in laboratory and animal models has the ability to suppress the oncogenic phenotype of a variety of viruses and cellular derived oncogenes. The inhibitory effects of AAV have been mapped to its rap gene (Rep78 protein). Furthermore, seroepidemiologic data indicat...

journal_title：Virus genes

authors： Han L,Parmley TH,Keith S,Kozlowski KJ,Smith LJ,Hermonat PL

更新日期：1996-01-01 00:00:00

abstract：:The thymidylate synthase (TS, EC 2.1.1.45) is essential for the de novo synthesis of dTMP in pro- and eucaryotic organisms. Consequently it plays a major role in the replication of the DNA genome of a cell or a DNA virus. The gene encoding the TS of Chilo iridescent virus (CIV) was identified by nucleotide sequence an...

journal_title：Virus genes

authors： Müller K,Tidona CA,Bahr U,Darai G

更新日期：1998-01-01 00:00:00

abstract：:The eight gene segments of avian influenza virus (AIV) reassort frequently and rapidly to generate novel genotypes and subtypes that are transmissible to a broad range of hosts. There is evidence that AIV can have a restricted host range and can segregate in space and time. Host-virus relationships at the species, geo...

journal_title：Virus genes

authors： Girard YA,Runstadler JA,Aldehoff F,Boyce W

更新日期：2012-06-01 00:00:00

abstract：:Caliciviruses are nonenveloped with a polyadenylated genome of approximately 7.6 kb and a single capsid protein. The "RNA Fold" computer program was used to analyze 3'-terminal noncoding sequences of five feline calicivirus (FCV), rabbit hemorrhagic disease virus (RHDV), and two San Miguel sea lion virus (SMSV) isolat...

journal_title：Virus genes

authors： Seal BS,Neill JD,Ridpath JF

更新日期：1994-07-01 00:00:00

abstract：:The threat of highly virulent avian influenza, such as H5N1 and swine-origin H1N1 influenza viruses, bring out an urgent need to develop a universal influenza vaccine, which may provide cross-protection against different strain of influenza A viruses. The extra-domain of influenza M2 protein (M2e), which is almost com...

journal_title：Virus genes

authors： Ebrahimi SM,Tebianian M

更新日期：2011-02-01 00:00:00

abstract：:Canine distemper (CD) is a highly contagious, often fatal, multisystemic, and incurable disease in dogs and other carnivores, which is caused by canine distemper virus (CDV). Although vaccines have been used as the principal means of controlling the disease, CD has been reported in vaccinated animals. The hemoagglutin...

journal_title：Virus genes

authors： Li W,Li T,Liu Y,Gao Y,Yang S,Feng N,Sun H,Wang S,Wang L,Bu Z,Xia X

更新日期：2014-08-01 00:00:00

abstract：:Pandemic H1N1 2009 (pH1N1), influenza virus containing triple reassortant internal genes (TRIG) from avian, human, and swine influenza viruses emerged in 2009 as a highly infectious virus that was able to be transmitted from humans to pigs. During June 2010-May 2012, influenza virus surveillance was conducted in Thai ...

journal_title：Virus genes

authors： Charoenvisal N,Keawcharoen J,Sreta D,Chaiyawong S,Nonthabenjawan N,Tantawet S,Jittimanee S,Arunorat J,Amonsin A,Thanawongnuwech R

更新日期：2013-08-01 00:00:00

abstract：:Viral RNA from purified preparations of bean mild mosaic virus (BMMV) was resolved into two RNAs of mol. wt 1.5 X 10(6) daltons (R1) and 0.76 X 10(6) daltons (R2). Complementary DNA hybridizations, infectivity tests, and in-vitro translation studies established that R2 is a subgenomic RNA derived from R1. In-vitro tra...

journal_title：Virus genes

authors： Hari V,Gadh IP,Baunoch D,Das P

更新日期：1989-05-01 00:00:00

abstract：:The complete nucleotide sequence of mumps virus isolated in Korea, Dg1062/Korea/98 (Dg1062), was determined. As other mumps viruses, its genome was to be 15,384 nucleotides (nts) in length and encoded seven proteins. The both 5' and 3' ends were confirmed to be 55 and 24 nts by RACE method, respectively. The full-leng...

journal_title：Virus genes

authors： Lee JY,Na BK,Lee HD,Chang SW,Kim KA,Kim JH,Cho HW,Kim J,Kang C

更新日期：2004-03-01 00:00:00

abstract：:Avian reovirus infection causes considerable economic loss to the commercial poultry industry. Live-attenuated vaccine strain S1133 (v-S1133, derived from parent strain S1133) is considered the safest and most effective vaccine and is currently used worldwide. To identify the genes responsible for its attenuation, DNA...

journal_title：Virus genes

authors： Teng L,Xie Z,Xie L,Liu J,Pang Y,Deng X,Xie Z,Fan Q,Luo S,Feng J,Khan MI

更新日期：2014-04-01 00:00:00

abstract：:Gallid herpesvirus-1 (GaHV-1), commonly named infectious laryngotracheitis (ILT) virus, causes the respiratory disease in chickens known as ILT. The molecular determinants associated with differences in pathogenicity of GaHV-1 strains are not completely understood, and a comparison of genomic sequences of isolates tha...

journal_title：Virus genes

authors： Spatz SJ,Volkening JD,Keeler CL,Kutish GF,Riblet SM,Boettger CM,Clark KF,Zsak L,Afonso CL,Mundt ES,Rock DL,Garcia M

更新日期：2012-04-01 00:00:00

abstract：:All known sequences of the DNA encoding the major cervical cancer-causing human papillomavirus type 16 (HPV16) L1 capsid protein contain initiation codons which would allow translation to begin at either nucleotide 5559 or 5637. However the formation of virus-like particles (VLPs) only occurs efficiently when the init...

journal_title：Virus genes

authors： Webb E,Cox J,Edwards S

更新日期：2005-01-01 00:00:00

abstract：:Recently, NADC30-like porcine reproductive and respiratory syndrome viruses (PRRSVs), which are genetically similar to the NADC30 strain isolated in the United States of America in 2008, have become prevalent in China. Here, a novel variant PRRSV strain named HNhx was successfully isolated on porcine alveolar macropha...

journal_title：Virus genes

authors： Wang LJ,Wan B,Guo Z,Qiao S,Li R,Xie S,Chen XX,Zhang G

更新日期：2018-02-01 00:00:00

abstract：:Chinese equine infectious anemia virus (EIAV) attenuated vaccine is the first lentiviral vaccine with a successful application. In order to understand the correlation of viral genomic mutations with viral attenuation and with induced immunoprotective properties, we analyzed the proviral genome sequences of the EIAV-at...

journal_title：Virus genes

authors： Qi X,Wang X,Wang S,Lin Y,Jiang C,Ma J,Zhao L,Lv X,Shen R,Wang F,Kong X,Su Z,Zhou J

更新日期：2010-08-01 00:00:00

abstract：:Bovine viral diarrhea virus (BVDV) belongs to the Pestivirus genus of the Flaviviridae family and has worldwide distribution, being one of the main causes of economic losses in cattle raising. The genome of pestiviruses is a single strand of positive-sense RNA with a length of 12.3 kb, which encodes one open reading f...

journal_title：Virus genes

authors： Mirosław P,Polak MP

更新日期：2020-08-01 00:00:00

abstract：:Glycosylation on the globular head of the hemagglutinin (HA) protein of influenza virus acts as an important target for recognition and destruction of virus by innate immune proteins of the collectin family. In the current study, we have characterized the dynamic amino acid changes at N-linked glycosylation sites of f...

journal_title：Virus genes

authors： El Moussi A,Ben Hadj Kacem MA,Slim A

更新日期：2014-02-01 00:00:00

abstract：:A BK virus isolate cloned from the urine of an immunosuppressed patient was identified as the WW strain. Fine mapping using four base-pair restriction enzymes identified a number of small deletions and insertions relative to prototype BK. The finding of a transcriptional control region with a structure similar to that...

journal_title：Virus genes

authors： Rubinstein R,Harley EH

更新日期：1989-03-01 00:00:00

abstract：:Molecular characterization of Bovine leukemia virus (BLV) isolates from Brazil using the env gene sequences revealed a high conservation of this gene. In most cases the substitutions corresponded to silent transitions. In addition, cystein residues, potential glycosylation sites, neutralization domains and other criti...

journal_title：Virus genes

authors： Camargos MF,Pereda A,Stancek D,Rocha MA,dos Reis JK,Greiser-Wilke I,Leite RC

更新日期：2007-06-01 00:00:00

abstract：:The baculovirus system was used to express the X protein of human hepatitis B virus (HBV). The X open reading frames (X ORFs) from cloned viral DNA of the HBV subtypes ayw and adr were introduced into the genome of Autographa californica nuclear polyhedrosis virus (AcNPV). The HBV-DNA of subtype adr derived from a hep...

journal_title：Virus genes

authors： Klein R,Schröder CH,Zentgraf H

更新日期：1991-04-01 00:00:00

abstract：:African monkeys are resistant to HIV-1 infection due to intrinsic restriction mechanisms found in their cells. However, although they can be infected by monkey-adapted modified HIV-1 particles that are designed to overcome known restriction factors, virus numbers drop to undetectable levels in immunocompetent animals....

journal_title：Virus genes

authors： Özdemir S,Şengez B,Arslanoğlu A

更新日期：2020-04-01 00:00:00

abstract：:By using a phage vector (lambda ZAP II) and the mRNA extracted from IMR-32 cells infected with the RC.HL strain of rabies virus, we constructed a cDNA library from which four nucleoprotein (N)-specific cDNA clones were obtained by Southern blot hybridization. These clones contained a cDNA insert of about 1.4 kb, in wh...

journal_title：Virus genes

authors： Goto H,Minamoto N,Ito H,Sugiyama M,Kinjo T,Mannen K,Mifune K,Kawai A

更新日期：1994-03-01 00:00:00

abstract：:The infection of humans with Boma disease virus (BDV) is still a matter of debate. In a recent publication, we described a BDV (RW98) isolated from the blood of a psychiatric patient. The RNA of this virus differed more than 5% from that of the widely used strain He/80, which was supposed to represent our laboratory v...

journal_title：Virus genes

authors： Planz O,Rziha HJ,Stitz L

更新日期：2003-01-01 00:00:00

abstract：:The complete nucleotide sequence of a virus isolated from soybean (Glycine max (L.) Merr.) in China, previously identified as a new strain of Tobacco necrosis virus A (TNV-A) based on its biological, serological properties, and coat protein (CP) sequence and named as TNV-A C, was determined and compared with that of T...

journal_title：Virus genes

authors： Xi D,Li J,Han C,Li D,Yu J,Zhou X

更新日期：2008-02-01 00:00:00

abstract：:An evolutionary analysis was conducted of 354 hemagglutinin (HA) and 208 neuraminidase (NA) genes, including newly generated sequences of 5 HA and 30 NA, of Egyptian H5N1 clade 2.2.1 viruses isolated from poultry and humans. Five distinct phylogenetically distinguishable clusters arose from a monophyletic origin since...

journal_title：Virus genes

authors： Abdelwhab EM,Arafa AS,Stech J,Grund C,Stech O,Graeber-Gerberding M,Beer M,Hassan MK,Aly MM,Harder TC,Hafez HM

更新日期：2012-08-01 00:00:00

abstract：:A goose parvovirus (GPV) Y strain was isolated from Muscovy ducks in Anhui Province of China. By polymerase chain reaction method, its complete genomic sequence was found to be 5,106 bp in length, consisting of 444-bp inverted terminal repeat, 1,844-bp non-structural protein and 2,199-bp capsid protein (VP) regions. T...

journal_title：Virus genes

authors： Liu HM,Wang H,Tian XJ,Zhang S,Zhou XH,Qi KZ,Pan L

更新日期：2014-02-01 00:00:00